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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8iLR | 35543 | 2023-11-15 | 2023-03-04 | 3.05 | 3.24 | 3.08 | 3.3 | 0.003 | 0.45 | 1.0 | 0.04 | 15.95 | 0.00 | 1.967 | 27.72 | 0.35 | 4.5 | 95.5 | 0.1 | 0.10 | 0.73 | 0.82 | 2.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10374 | 1253 | 3 | 0 | 1 | 7 | 0 | logfile |
✘ | 8iHR | 35453 | 2023-11-18 | 2023-02-23 | 2.5 | 2.65 | 2.53 | 2.7 | 0.004 | 0.67 | 0.0 | 0.05 | 15.87 | 0.00 | 2.138 | 4.14 | 0.70 | 2.8 | 97.2 | 0.0 | -0.52 | 0.74 | 0.89 | 4.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24224 | 3200 | 16 | 0 | 16 | 0 | 0 | logfile |
✘ | 8GAE | 29895 | 2023-11-21 | 2023-02-22 | 3.3 | 4.66 | 3.24 | 2.4 | 0.016 | 2.11 | 27.0 | 0.12 | 14.68 | 0.02 | 1.904 | 1.55 | 0.05 | 2.0 | 98.0 | 0.0 | -1.76 | 0.92 | 0.81 | 2.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35378 | 2175 | 8 | 0 | 8 | 0 | 17630 | logfile |
✘ | 8GA8 | 29892 | 2023-11-18 | 2023-02-22 | 3.5 | 3.70 | 3.49 | 3.7 | 0.003 | 0.54 | 0.0 | 0.04 | 17.43 | 0.00 | 2.028 | 11.33 | 0.33 | 2.6 | 97.4 | 0.0 | 0.98 | 0.70 | 0.69 | 0.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22011 | 2675 | 12 | 0 | 2 | 0 | 0 | logfile |
✘ | 8G9F | 29864 | 2023-11-22 | 2023-02-21 | 3.2 | 3.77 | 3.13 | 3.2 | 0.003 | 0.50 | 0.0 | 0.04 | 16.16 | 0.00 | 2.257 | 2.77 | 0.00 | 3.1 | 96.9 | 0.0 | 0.34 | 0.89 | 0.83 | 3.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37540 | 2321 | 7 | 0 | 4 | 0 | 18758 | logfile |
✘ | 8iFF | 35415 | 2023-11-16 | 2023-02-17 | 3.1 | 3.34 | 3.19 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 18.24 | 0.01 | 2.153 | 9.51 | 0.27 | 5.2 | 94.8 | 0.0 | -0.43 | 0.66 | 0.81 | 1.60 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13698 | 1736 | 4 | 0 | 2 | 0 | 0 | logfile |
✘ | 8iDE | 35365 | 2023-11-14 | 2023-02-13 | 3.21 | 3.58 | 3.38 | 3.5 | 0.003 | 0.71 | 0.0 | 0.04 | 13.14 | 0.00 | 1.906 | 14.45 | 0.24 | 14.1 | 85.4 | 0.5 | -1.37 | 0.75 | 0.77 | 2.17 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8393 | 1177 | 3 | 0 | 1 | 0 | 0 | logfile |
✘ | 8G3V | 29710 | 2023-11-17 | 2023-02-08 | 2.2 | 2.84 | 2.21 | 2.7 | 0.014 | 1.61 | 4.0 | 0.09 | 13.68 | 0.01 | 2.257 | 0.54 | 0.00 | 3.9 | 95.8 | 0.3 | -0.74 | 0.83 | 0.93 | 6.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20045 | 2500 | 28 | 0 | 61 | 0 | 0 | logfile |
✘ | 8i9V | 35285 | 2023-11-20 | 2023-02-07 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -2.63 | — | — | 2.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 138001 | 11303 | 60 | 2408 | 4 | 0 | 0 | logfile |
✘ | 8CGV | 16652 | 2023-11-20 | 2023-02-06 | 1.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 87899 | 2819 | 67 | 2743 | 307 | 6570 | 0 | logfile |
✘ | 8CE7 | 16600 | 2023-11-15 | 2023-02-01 | 2.7 | 2.34 | 2.46 | 2.7 | 0.010 | 1.47 | 12.0 | 0.09 | 13.19 | 0.01 | 0.000 | 16.71 | 3.33 | 9.0 | 91.0 | 0.0 | -3.63 | 0.44 | 0.73 | 6.36 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10512 | 1512 | 24 | 0 | 0 | 0 | 0 | logfile |
✘ | 8i6S | 35205 | 2023-11-14 | 2023-01-29 | 4.4 | 4.82 | 4.39 | 4.4 | 0.006 | 1.39 | 2.0 | 0.06 | 15.97 | 0.01 | 2.073 | 4.55 | 0.97 | 4.1 | 95.7 | 0.2 | -5.18 | 0.73 | 0.60 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8641 | 1125 | 7 | 0 | 4 | 0 | 0 | logfile |
✘ | 8FXH | 29533 | 2023-11-20 | 2023-01-24 | 2.8 | 2.94 | 2.88 | 4.0 | 0.006 | 1.37 | 50.0 | 0.10 | 17.25 | 0.01 | 2.235 | 6.73 | 1.19 | 7.8 | 91.8 | 0.4 | -1.03 | 0.32 | 0.19 | 0.18 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30228 | 3786 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 8BQV | 16188 | 2023-11-14 | 2023-01-18 | 2.0 | 1.96 | 1.89 | 1.9 | 0.008 | 1.01 | 0.0 | 0.07 | 8.75 | 0.00 | 0.000 | 15.01 | 0.00 | 6.8 | 93.2 | 0.0 | -2.59 | 0.54 | 0.77 | 8.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8595 | 1155 | 45 | 0 | 105 | 120 | 0 | logfile |
✘ | 8BQW | 16189 | 2023-11-17 | 2023-01-18 | 2.3 | 2.12 | 2.14 | 2.2 | 0.008 | 1.14 | 0.0 | 0.07 | 8.96 | 0.00 | 0.052 | 12.77 | 0.00 | 9.6 | 90.4 | 0.0 | -3.78 | 0.46 | 0.75 | 7.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17385 | 2310 | 90 | 0 | 270 | 135 | 0 | logfile |
✘ | 8C5i | 16437 | 2023-11-20 | 2023-01-09 | 3.15 | 3.22 | — | 3.2 | 0.004 | 0.56 | 0.0 | 0.04 | 16.20 | 0.00 | 1.942 | 3.57 | 0.12 | 5.1 | 94.7 | 0.2 | -0.98 | 0.64 | 0.85 | 4.24 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 89156 | 5706 | 18 | 0 | 0 | 0 | 43742 | logfile |
✘ | 8FPJ | 29366 | 2023-11-19 | 2023-01-04 | 2.74 | 2.94 | 2.78 | 3.0 | 0.004 | 0.69 | 0.0 | 0.04 | 14.26 | 0.00 | 2.008 | 5.89 | 0.00 | 5.7 | 94.3 | 0.0 | -0.24 | 0.69 | 0.82 | 2.96 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25960 | 1596 | 6 | 0 | 1 | 0 | 13143 | logfile |
✘ | 8FoA | 29343 | 2023-11-18 | 2022-12-30 | 2.66 | 2.96 | 2.81 | 2.9 | 0.023 | 1.52 | 0.0 | 0.53 | 17.58 | 0.01 | 2.298 | 7.30 | 0.42 | 5.2 | 94.7 | 0.0 | -5.28 | 0.66 | 0.84 | 4.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21287 | 2448 | 8 | 0 | 53 | 0 | 0 | logfile |
✘ | 8FoB | 29344 | 2023-11-17 | 2022-12-30 | 2.71 | 2.96 | 2.77 | 3.0 | 0.024 | 1.57 | 0.0 | 0.54 | 17.44 | 0.01 | 2.073 | 8.34 | 0.39 | 8.3 | 91.7 | 0.0 | -5.44 | 0.60 | 0.72 | 2.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20390 | 2376 | 12 | 0 | 46 | 52 | 0 | logfile |
✘ | 8HTU | 35018 | 2023-11-14 | 2022-12-21 | 2.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 57715 | 5089 | 51 | 0 | 366 | 2 | 0 | logfile |