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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8ZRH | 60396 | 2025-01-15 | 2024-06-04 | 3.6 | 2.84 | 3.64 | 2.1 | 0.007 | 0.93 | 0.0 | 0.05 | 16.05 | 0.01 | 2.383 | 9.08 | 1.82 | 3.8 | 95.9 | 0.3 | 0.45 | 0.61 | 0.67 | 0.80 | 2.2 | 0.003 | 0.82 | 0.0 | 0.05 | 17.01 | 0.01 | 2.429 | 11.41 | 5.00 | 5.2 | 94.7 | 0.1 | -0.08 | 1.34 | 0.63 | 0.72 | 1.20 | 8036 | 1019 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 9C4N | 45191 | 2025-01-13 | 2024-06-04 | 2.9 | 2.74 | — | 3.0 | 0.013 | 1.70 | 0.0 | 0.06 | 9.18 | 0.01 | 2.779 | 0.00 | 0.00 | 14.3 | 85.7 | 0.0 | -0.15 | 0.12 | 0.70 | 7.51 | 3.0 | 0.060 | 1.79 | 1.0 | 0.22 | 23.53 | 0.02 | 2.477 | 0.00 | 25.00 | 0.0 | 100.0 | 0.0 | -6.32 | 1.38 | 0.19 | 0.79 | 5.31 | 69 | 9 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZRA | 60394 | 2025-01-18 | 2024-06-04 | 3.32 | 3.61 | 3.30 | 3.7 | 0.006 | 0.77 | 0.0 | 0.05 | 15.35 | 0.01 | 2.251 | 16.83 | 0.00 | 10.4 | 89.6 | 0.0 | -4.04 | 0.66 | 0.82 | 4.11 | 3.7 | 0.003 | 0.67 | 0.0 | 0.05 | 17.09 | 0.01 | 2.569 | 9.14 | 3.36 | 5.0 | 95.0 | 0.0 | -2.15 | 0.58 | 0.67 | 0.84 | 4.48 | 11772 | 1422 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 9C4E | 45183 | 2025-01-20 | 2024-06-04 | 2.73 | 3.23 | 2.73 | 3.1 | 0.003 | 0.53 | 0.0 | 0.04 | 16.12 | 0.00 | 2.218 | 6.74 | 0.82 | 2.0 | 98.0 | 0.0 | 0.56 | 0.61 | 0.76 | 3.24 | 3.1 | 0.003 | 0.52 | 0.0 | 0.04 | 16.48 | 0.00 | 2.505 | 5.03 | 1.33 | 1.6 | 98.4 | 0.0 | 0.58 | 1.06 | 0.68 | 0.82 | 3.44 | 14760 | 1932 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZR5 | 60392 | 2025-01-21 | 2024-06-04 | 3.31 | 3.53 | 3.31 | 3.6 | 0.005 | 0.71 | 0.0 | 0.04 | 15.90 | 0.00 | 2.192 | 5.13 | 0.23 | 3.0 | 97.0 | 0.0 | -0.42 | 0.59 | 0.82 | 2.74 | 3.6 | 0.002 | 0.49 | 0.0 | 0.04 | 16.42 | 0.00 | 2.430 | 2.47 | 1.72 | 1.8 | 98.2 | 0.0 | 1.07 | 0.97 | 0.62 | 0.84 | 2.30 | 16195 | 1044 | 6 | 0 | 1 | 0 | 8043 | logfile |
✔ | 8ZRK | 60399 | 2025-01-20 | 2024-06-04 | 2.82 | 3.00 | 2.84 | 3.0 | 0.004 | 0.65 | 0.0 | 0.04 | 18.74 | 0.00 | 2.191 | 5.16 | 0.95 | 4.1 | 95.9 | 0.0 | 0.53 | 0.58 | 0.79 | 2.90 | 3.0 | 0.003 | 0.53 | 0.0 | 0.04 | 18.18 | 0.00 | 2.316 | 3.08 | 2.49 | 4.3 | 95.7 | 0.0 | 1.02 | 0.26 | 0.57 | 0.80 | 2.67 | 15895 | 1032 | 6 | 0 | 1 | 0 | 7877 | logfile |
✔ | 9C45 | 45175 | 2025-01-13 | 2024-06-03 | 3.2 | 3.43 | 3.23 | 3.5 | 0.011 | 1.26 | 0.0 | 0.08 | 11.88 | 0.01 | 2.507 | 0.81 | 0.00 | 2.5 | 97.5 | 0.0 | 1.45 | 0.70 | 0.85 | 5.90 | 3.4 | 0.005 | 0.62 | 0.0 | 0.05 | 12.15 | 0.00 | 2.574 | 2.28 | 2.53 | 2.5 | 97.5 | 0.0 | 0.54 | 0.95 | 0.69 | 0.90 | 5.63 | 3900 | 496 | 6 | 0 | 9 | 0 | 0 | logfile |
✔ | 8ZQQ | 60388 | 2025-01-13 | 2024-06-03 | 2.5 | 2.79 | 2.52 | 2.8 | 0.003 | 0.65 | 0.0 | 0.04 | 16.30 | 0.00 | 2.211 | 2.21 | 0.25 | 2.5 | 97.5 | 0.0 | 1.76 | 0.64 | 0.87 | 3.26 | 2.8 | 0.003 | 0.57 | 0.0 | 0.04 | 14.65 | 0.00 | 2.205 | 2.33 | 1.51 | 2.1 | 97.9 | 0.0 | 2.17 | 0.87 | 0.63 | 0.86 | 2.94 | 3836 | 492 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 9C47 | 45176 | 2025-01-16 | 2024-06-03 | 3.4 | 3.75 | 3.55 | 3.6 | 0.003 | 0.55 | 0.0 | 0.04 | 17.24 | 0.01 | 1.832 | 10.72 | 0.63 | 6.0 | 93.5 | 0.5 | 0.74 | 0.74 | 0.78 | 1.72 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 17.54 | 0.00 | 2.258 | 8.79 | 1.99 | 5.6 | 94.1 | 0.3 | 1.00 | 1.14 | 0.74 | 0.79 | 1.56 | 52167 | 3212 | 2 | 0 | 0 | 0 | 26380 | logfile |
✔ | 8ZQR | 60389 | 2025-01-13 | 2024-06-03 | 3.6 | 3.82 | 3.65 | 3.9 | 0.005 | 0.92 | 2.0 | 0.06 | 18.43 | 0.01 | 2.229 | 8.96 | 0.76 | 5.8 | 94.2 | 0.0 | -0.86 | 0.60 | 0.80 | 1.77 | 3.9 | 0.003 | 0.68 | 0.0 | 0.04 | 17.07 | 0.00 | 2.578 | 5.67 | 3.56 | 4.0 | 96.0 | 0.0 | 0.80 | 1.01 | 0.54 | 0.80 | 0.74 | 3778 | 486 | 2 | 0 | 3 | 0 | 0 | logfile |
✔ | 9C4B | 45180 | 2025-01-14 | 2024-06-03 | 3.4 | 3.78 | 3.57 | 3.7 | 0.004 | 0.73 | 1.0 | 0.05 | 16.50 | 0.00 | 1.827 | 10.64 | 0.89 | 5.9 | 93.3 | 0.8 | -0.46 | 0.62 | 0.72 | 1.52 | 3.7 | 0.003 | 0.56 | 0.0 | 0.04 | 17.01 | 0.00 | 2.386 | 7.04 | 1.78 | 6.7 | 93.0 | 0.3 | -0.41 | 0.52 | 0.62 | 0.72 | 1.61 | 6110 | 393 | 1 | 0 | 0 | 0 | 3030 | logfile |
✔ | 8ZQE | 60384 | 2025-01-15 | 2024-06-02 | 2.9 | 2.31 | 3.03 | 2.1 | 0.004 | 0.71 | 0.0 | 0.05 | 13.70 | 0.00 | 2.169 | 12.51 | 0.21 | 4.5 | 95.5 | 0.0 | -0.15 | 0.74 | 0.75 | 2.45 | 2.1 | 0.004 | 0.69 | 0.0 | 0.04 | 17.21 | 0.01 | 2.405 | 10.44 | 2.22 | 3.4 | 96.6 | 0.0 | 0.05 | 1.33 | 0.77 | 0.81 | 2.51 | 8767 | 1131 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZPT | 60354 | 2025-01-16 | 2024-05-31 | 2.96 | 2.53 | 2.83 | 3.0 | 0.002 | 0.45 | 0.0 | 0.04 | 10.05 | 0.00 | 1.974 | 6.41 | 0.20 | 2.2 | 97.8 | 0.0 | 1.57 | 0.57 | 0.73 | 2.45 | 3.0 | 0.003 | 0.64 | 0.0 | 0.04 | 15.49 | 0.00 | 2.432 | 5.81 | 2.62 | 2.9 | 97.1 | 0.0 | 0.65 | 1.78 | 0.59 | 0.79 | 2.50 | 9151 | 1162 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 9FJY | 50517 | 2025-01-20 | 2024-05-31 | 3.79 | 4.12 | 3.87 | 4.0 | 0.004 | 0.60 | 0.0 | 0.04 | 18.47 | 0.00 | 1.723 | 9.49 | 0.41 | 1.7 | 98.3 | 0.0 | 0.26 | 0.82 | 0.83 | 2.23 | 4.0 | 0.004 | 0.70 | 0.0 | 0.05 | 16.85 | 0.00 | 1.950 | 9.59 | 4.58 | 2.7 | 97.3 | 0.0 | 0.15 | 0.97 | 0.82 | 0.83 | 1.71 | 15968 | 2010 | 22 | 0 | 24 | 0 | 0 | logfile |
✔ | 9C3E | 45166 | 2025-01-17 | 2024-05-31 | 3.5 | 4.21 | 3.49 | 3.9 | 0.005 | 0.89 | 0.0 | 0.05 | 15.76 | 0.01 | 2.140 | 16.01 | 1.92 | 4.2 | 95.7 | 0.2 | -0.18 | 0.74 | 0.79 | 2.36 | 3.9 | 0.003 | 0.71 | 0.0 | 0.05 | 16.01 | 0.00 | 2.484 | 9.89 | 5.12 | 4.3 | 95.6 | 0.1 | 0.44 | 0.53 | 0.74 | 0.80 | 2.10 | 10619 | 1356 | 15 | 0 | 13 | 0 | 0 | logfile |
✔ | 8ZPW | 60365 | 2025-01-16 | 2024-05-31 | 3.0 | 3.15 | 2.95 | 3.2 | 0.003 | 0.53 | 0.0 | 0.04 | 15.06 | 0.00 | 2.043 | 6.26 | 1.19 | 2.0 | 98.0 | 0.0 | 1.19 | 0.78 | 0.87 | 3.54 | 3.2 | 0.003 | 0.55 | 0.0 | 0.04 | 15.91 | 0.00 | 2.592 | 7.14 | 1.39 | 1.7 | 98.3 | 0.0 | 1.27 | 0.41 | 0.78 | 0.87 | 3.08 | 9252 | 1145 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 9FJM | 50506 | 2025-01-18 | 2024-05-31 | 3.65 | 3.91 | 3.68 | 3.9 | 0.002 | 0.57 | 0.0 | 0.04 | 16.75 | 0.00 | 1.766 | 8.19 | 0.24 | 1.5 | 98.5 | 0.0 | -0.30 | 0.74 | 0.82 | 2.24 | 3.9 | 0.004 | 0.89 | 1.0 | 0.05 | 17.17 | 0.00 | 2.026 | 8.62 | 3.39 | 2.1 | 97.8 | 0.1 | 0.28 | 0.96 | 0.75 | 0.83 | 1.93 | 11772 | 1487 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 8ZPS | 60353 | 2025-01-15 | 2024-05-31 | 2.97 | 2.45 | 2.77 | 3.0 | 0.002 | 0.54 | 0.0 | 0.04 | 9.77 | 0.00 | 1.744 | 8.01 | 1.06 | 2.4 | 97.6 | 0.0 | 1.49 | 0.49 | 0.65 | 1.55 | 2.9 | 0.003 | 0.61 | 0.0 | 0.04 | 14.95 | 0.00 | 2.357 | 7.44 | 2.77 | 3.2 | 96.8 | 0.0 | 1.12 | 1.40 | 0.62 | 0.78 | 2.41 | 8848 | 1135 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 9FJU | 50516 | 2025-01-20 | 2024-05-31 | 3.84 | 4.15 | 3.89 | 4.0 | 0.004 | 0.61 | 0.0 | 0.04 | 18.81 | 0.00 | 1.705 | 9.90 | 0.18 | 2.1 | 97.9 | 0.0 | 0.15 | 0.82 | 0.83 | 1.83 | 4.0 | 0.003 | 0.71 | 0.0 | 0.05 | 17.31 | 0.00 | 1.932 | 9.24 | 3.35 | 3.4 | 96.6 | 0.0 | 0.05 | 0.42 | 0.83 | 0.83 | 1.70 | 15968 | 2010 | 22 | 0 | 24 | 0 | 0 | logfile |
✔ | 8ZPV | 60355 | 2025-01-18 | 2024-05-31 | 2.9 | 3.96 | 3.05 | 3.6 | 0.007 | 0.83 | 4.0 | 0.05 | 17.50 | 0.00 | 2.026 | 14.13 | 10.22 | 8.2 | 91.7 | 0.1 | -2.61 | 0.81 | 0.73 | 0.57 | 3.5 | 0.003 | 0.89 | 0.0 | 0.05 | 17.61 | 0.00 | 2.281 | 10.97 | 3.00 | 7.0 | 92.9 | 0.1 | 0.13 | 1.77 | 0.86 | 0.85 | 1.60 | 12440 | 1552 | 6 | 0 | 2 | 0 | 0 | logfile |