Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7WTR	32796	2024-02-13	2022-02-05	3.5	3.44	—	3.3	0.006	0.88	0.0	0.05	22.22	0.01	2.080	6.30	0.00	7.2	92.7	0.1	-3.07	0.84	0.83	2.34	3.3	0.007	0.75	0.0	0.04	22.30	0.01	2.054	12.74	2.70	9.0	90.9	0.1	-1.26	1.13	0.84	0.83	1.97	53512	3259	20	1298	1	0	0	logfile
✔	7WTS	32799	2024-02-14	2022-02-05	3.2	3.07	—	3.0	0.005	0.85	0.0	0.05	22.59	0.01	2.076	5.07	0.09	3.8	96.2	0.0	-1.00	0.75	0.75	2.70	3.0	0.005	0.68	0.0	0.04	22.62	0.01	2.038	9.50	1.98	4.2	95.8	0.0	0.19	0.38	0.78	0.80	2.50	61945	3777	23	1481	0	0	0	logfile
✔	7WTQ	32795	2024-02-25	2022-02-05	3.7	3.57	—	3.4	0.005	0.90	0.0	0.05	22.13	0.01	2.146	6.91	0.04	8.0	91.8	0.1	-1.90	0.82	0.79	1.74	3.4	0.007	0.79	0.0	0.04	22.34	0.01	1.983	16.71	4.14	9.7	90.2	0.1	-1.21	1.15	0.83	0.80	1.24	51309	3079	19	1255	1	0	0	logfile
✔	7WTW	32803	2024-02-20	2022-02-05	3.2	3.12	—	3.0	0.004	0.80	0.0	0.04	21.28	0.01	1.921	6.44	0.02	4.1	95.8	0.0	-1.12	0.73	0.67	2.19	3.0	0.005	0.67	0.0	0.04	21.51	0.00	1.936	11.95	1.74	4.0	95.9	0.1	0.15	1.13	0.76	0.72	1.99	87147	6694	39	1586	2	0	0	logfile
✔	7WU2	32817	2024-02-13	2022-02-05	2.8	2.56	—	2.8	0.002	0.51	0.0	0.04	12.86	0.00	2.200	6.51	0.00	2.1	97.9	0.0	0.79	0.64	0.77	2.92	2.8	0.003	0.55	0.0	0.04	16.00	0.00	2.186	7.02	2.74	3.4	96.6	0.0	0.89	1.20	0.65	0.81	3.27	7829	1010	5	0	0	0	0	logfile
✔	7WTH	32786	2024-02-13	2022-02-04	4.3	3.63	—	4.0	0.004	0.78	0.0	0.05	12.97	0.01	2.169	9.08	0.85	8.0	92.0	0.0	-2.03	0.69	0.70	—	4.0	0.003	0.69	0.0	0.05	13.50	0.00	2.162	9.39	0.00	9.9	90.1	0.0	-2.15	0.53	0.69	0.71	—	3257	421	3	0	0	0	0	logfile
✔	7TVi	26141	2024-02-16	2022-02-04	3.2	3.59	2.45	3.5	0.005	0.82	0.0	0.05	14.02	0.01	2.228	5.20	0.07	2.6	97.4	0.0	-0.83	0.67	0.67	0.72	3.5	0.004	1.06	3.0	0.05	16.16	0.01	2.170	11.35	3.31	2.4	97.6	0.0	-0.16	1.83	0.74	0.79	2.08	13746	1687	10	0	6	0	0	logfile
✔	7R21	14244	2024-02-22	2022-02-04	3.1	3.37	—	3.3	0.003	0.58	0.0	0.04	15.78	0.01	2.156	10.45	0.06	6.8	93.1	0.1	-0.81	0.74	0.81	1.81	3.3	0.003	0.58	0.0	0.04	17.39	0.00	2.109	10.50	3.05	7.1	92.8	0.1	-0.66	1.42	0.75	0.85	1.84	34980	4317	19	62	0	0	0	logfile
✔	7WT8	32771	2024-02-21	2022-02-04	3.6	3.88	—	3.7	0.006	1.00	11.0	0.06	15.74	0.01	2.200	6.67	1.00	7.6	92.0	0.4	-2.76	0.78	0.76	1.54	3.7	0.003	0.61	0.0	0.04	15.17	0.00	2.126	10.22	2.31	6.3	93.5	0.2	-1.61	0.44	0.80	0.79	1.33	30240	3752	26	0	63	0	0	logfile
✔	7WTJ	32788	2024-02-13	2022-02-04	4.2	4.07	—	4.1	0.006	0.85	3.0	0.05	13.86	0.01	2.242	10.88	0.58	8.9	91.1	0.0	-2.21	0.55	0.79	—	4.1	0.004	0.72	0.0	0.05	13.76	0.00	2.221	10.25	0.00	12.2	87.8	0.0	-1.92	0.40	0.55	0.80	—	3261	424	3	0	0	0	0	logfile
✔	7WTE	32780	2024-02-20	2022-02-04	3.3	4.21	—	3.5	0.004	0.74	2.0	0.05	15.11	0.00	1.040	11.76	1.95	6.5	93.4	0.1	-0.47	0.85	0.77	0.95	3.5	0.003	0.67	0.0	0.04	15.77	0.00	2.129	12.00	1.60	6.6	93.4	0.0	-0.27	1.27	0.87	0.81	0.90	27160	3493	6	0	4	0	0	logfile
✔	7WTi	32787	2024-02-21	2022-02-04	3.8	4.18	—	3.9	0.004	0.91	1.0	0.06	14.05	0.01	2.248	5.15	0.12	6.7	93.3	0.0	-2.60	0.82	0.76	1.66	3.9	0.005	0.85	1.0	0.05	15.24	0.00	2.004	18.73	1.62	9.7	90.3	0.0	-2.15	0.45	0.83	0.79	1.50	31536	3981	12	0	36	0	0	logfile
✔	7WTC	32778	2024-02-20	2022-02-04	4.0	4.61	—	3.1	0.008	0.82	0.0	0.05	13.85	0.01	2.060	22.27	0.10	8.0	92.0	0.1	-0.78	0.86	0.65	—	3.1	0.004	0.77	0.0	0.05	15.91	0.00	2.079	25.30	2.42	8.6	91.4	0.0	-1.19	0.59	0.87	0.68	—	28418	3661	8	0	6	0	0	logfile
✔	7WTB	32775	2024-02-20	2022-02-04	3.7	4.54	—	3.7	0.008	0.92	2.0	0.05	14.94	0.00	2.109	10.11	1.76	6.9	92.9	0.2	0.09	0.89	0.74	0.45	3.8	0.003	0.71	0.0	0.04	15.86	0.00	2.085	13.87	2.19	7.3	92.6	0.1	0.03	1.43	0.91	0.82	1.07	28480	3661	8	0	8	0	0	logfile
✔	7TVE	26140	2024-02-16	2022-02-04	3.8	4.04	—	4.0	0.005	0.86	0.0	0.05	19.05	0.00	2.213	17.42	3.26	13.4	86.3	0.3	-4.24	0.73	0.69	1.65	4.0	0.003	0.68	0.0	0.04	19.82	0.00	2.163	13.33	3.57	8.4	91.5	0.1	-1.64	0.74	0.75	0.72	0.95	15456	1793	8	54	1	0	0	logfile
✔	7WTA	32773	2024-02-18	2022-02-04	3.9	6.12	—	3.5	0.008	0.82	0.0	0.04	13.25	0.00	2.171	19.58	0.00	8.2	91.8	0.0	-0.51	0.89	0.81	0.46	3.5	0.003	0.73	0.0	0.04	14.65	0.00	2.070	15.62	1.11	6.7	93.2	0.1	-0.55	0.42	0.89	0.81	0.46	21080	2736	8	0	4	0	0	logfile
✔	7WT9	32772	2024-02-13	2022-02-04	4.3	4.38	—	4.3	0.006	1.27	0.0	0.07	13.29	0.01	2.304	5.34	0.27	8.3	91.7	0.0	-3.40	0.71	0.73	—	4.2	0.005	0.81	0.0	0.05	13.45	0.01	2.110	25.00	0.27	12.0	88.0	0.0	-2.83	1.93	0.73	0.77	—	3343	430	3	0	0	0	0	logfile
✔	7WTK	32789	2024-02-21	2022-02-04	3.6	3.91	—	3.7	0.006	1.00	14.0	0.07	17.39	0.01	1.732	9.94	1.20	8.0	91.5	0.5	-2.94	0.80	0.80	1.72	3.7	0.003	0.64	0.0	0.04	15.30	0.00	2.177	10.24	2.39	7.2	92.8	0.1	-1.62	1.89	0.80	0.79	1.37	31895	3975	30	0	70	0	0	logfile
✔	7WTF	32784	2024-02-21	2022-02-04	3.0	3.29	—	3.3	0.006	1.01	6.0	0.07	15.82	0.01	2.278	6.28	0.52	7.1	92.7	0.2	-3.03	0.71	0.76	1.88	3.2	0.007	0.95	2.0	0.05	15.41	0.00	1.985	12.66	2.69	7.4	92.5	0.1	-1.62	1.20	0.74	0.83	2.13	32049	3966	32	0	75	0	0	logfile
✔	7WTD	32779	2024-02-20	2022-02-04	3.9	5.03	—	4.3	0.023	1.20	1.0	0.05	15.55	0.01	0.990	21.59	1.15	7.3	92.6	0.1	-0.88	0.81	0.61	0.10	4.4	0.003	0.80	0.0	0.04	16.53	0.00	2.084	18.48	2.20	6.9	93.0	0.1	-1.00	4.63	0.84	0.70	0.18	27137	3491	6	0	4	0	0	logfile

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