Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7WN3	32620	2024-02-23	2022-01-17	3.29	3.41	—	3.6	0.007	1.11	0.0	0.09	10.59	0.01	2.016	5.21	0.44	11.9	87.9	0.2	-4.63	0.75	0.66	1.28	3.3	0.005	0.98	2.0	0.05	15.07	0.00	2.012	12.74	2.54	8.1	91.9	0.0	-2.47	1.52	0.80	0.78	1.48	36584	4756	16	0	36	0	0	logfile
✔	7TJX	25939	2024-02-18	2022-01-17	4.0	3.84	4.09	3.9	0.003	0.62	0.0	0.05	12.05	0.00	1.858	2.49	0.05	1.8	98.2	0.0	0.09	0.60	0.79	—	3.9	0.003	0.66	0.0	0.04	15.74	0.00	1.899	10.37	3.59	2.6	97.4	0.0	0.37	1.47	0.62	0.80	—	21663	3072	12	0	11	0	0	logfile
✔	7WN6	32622	2024-02-23	2022-01-17	3.29	3.41	—	3.6	0.007	1.11	0.0	0.09	10.59	0.01	2.016	5.21	0.44	11.9	87.9	0.2	-4.63	0.75	0.66	1.28	3.3	0.005	0.98	2.0	0.05	15.07	0.00	2.012	12.74	2.54	8.1	91.9	0.0	-2.47	1.52	0.80	0.78	1.48	36584	4756	16	0	36	0	0	logfile
✔	7TKT	25981	2024-02-15	2022-01-17	3.6	3.75	3.75	3.7	0.007	1.26	0.0	0.04	21.05	0.01	2.224	6.30	0.00	4.7	95.3	0.0	0.63	0.72	0.81	2.05	3.8	0.003	0.66	0.0	0.04	18.26	0.00	2.185	8.09	0.07	5.5	94.5	0.0	1.10	1.94	0.71	0.82	2.23	13252	1560	8	0	56	0	0	logfile
✔	7TKM	25974	2024-02-18	2022-01-17	4.5	7.58	4.88	4.3	0.019	2.22	0.0	0.00	6.78	0.01	2.385	0.12	0.00	4.3	94.2	1.5	-0.44	0.59	0.59	—	4.3	0.004	0.82	0.0	0.00	5.62	0.00	2.105	12.83	0.00	9.6	90.0	0.3	-0.78	1.55	0.82	0.81	—	20227	5056	27	0	0	0	0	logfile
✔	7TJT	25931	2024-02-18	2022-01-17	3.2	3.46	3.29	3.4	0.003	0.63	0.0	0.05	13.04	0.00	1.991	3.26	0.00	1.2	98.8	0.0	0.60	0.75	0.85	3.19	3.4	0.003	0.53	0.0	0.04	14.91	0.00	1.970	5.76	1.10	1.9	98.1	0.0	1.37	2.65	0.78	0.88	2.50	23129	3099	11	0	7	0	0	logfile
✔	7TJU	25932	2024-02-18	2022-01-17	3.3	3.57	3.40	3.5	0.002	0.59	0.0	0.05	12.53	0.00	2.070	2.00	0.00	1.4	98.6	0.0	0.36	0.77	0.84	3.19	3.5	0.004	0.57	0.0	0.04	14.71	0.00	1.960	5.86	1.74	1.9	98.1	0.0	0.70	0.51	0.79	0.87	2.67	22687	3102	11	0	7	0	0	logfile
✔	7TJY	25946	2024-02-18	2022-01-17	3.8	4.84	3.78	3.6	0.020	2.29	0.0	0.00	6.75	0.01	2.333	0.12	0.00	4.3	94.3	1.5	-0.54	0.59	0.68	—	3.6	0.004	0.79	0.0	0.00	4.84	0.00	2.161	3.93	0.00	9.8	90.0	0.3	0.68	1.48	0.82	0.86	—	20228	5056	27	0	0	0	0	logfile
✔	7TJS	25930	2024-02-19	2022-01-17	3.2	3.47	3.27	3.4	0.003	0.60	0.0	0.05	12.99	0.00	1.901	1.77	0.00	1.5	98.5	0.0	0.55	0.78	0.85	3.14	3.4	0.005	0.62	0.0	0.05	15.09	0.00	1.901	5.42	1.33	2.1	97.9	0.0	0.98	0.54	0.72	0.85	2.59	23539	3102	12	0	8	0	0	logfile
✔	7TJV	25933	2024-02-18	2022-01-17	3.6	3.57	3.65	3.6	0.003	0.66	0.0	0.05	12.84	0.01	1.836	2.06	0.00	1.9	98.1	0.0	0.21	0.62	0.81	2.69	3.6	0.003	0.62	0.0	0.04	16.31	0.00	1.911	8.32	2.71	2.1	97.9	0.0	0.61	0.57	0.62	0.82	1.83	23170	3110	12	0	10	0	0	logfile
✔	7QUD	14148	2024-02-13	2022-01-17	3.47	3.26	—	3.3	0.004	0.62	0.0	0.04	16.74	0.01	2.033	11.70	0.00	3.5	96.5	0.0	-0.13	0.67	0.77	2.12	3.2	0.003	0.59	0.0	0.04	18.27	0.01	1.995	12.31	2.79	2.9	97.1	0.0	-0.01	0.43	0.67	0.78	1.61	6696	844	4	0	3	0	0	logfile
✔	7TK0	25948	2024-02-18	2022-01-17	4.4	6.63	4.39	4.1	0.019	2.21	0.0	0.00	6.55	0.01	2.394	0.08	0.00	3.9	94.5	1.5	-0.40	0.58	0.62	—	4.1	0.003	0.80	0.0	0.00	5.24	0.00	2.105	7.94	0.00	8.9	90.9	0.3	-0.45	0.81	0.83	0.81	—	20220	5054	27	0	0	0	0	logfile
✔	7TJZ	25947	2024-02-18	2022-01-17	4.4	7.00	4.54	4.2	0.019	2.21	0.0	0.00	6.67	0.01	2.384	0.19	0.00	4.2	94.2	1.6	-0.41	0.58	0.63	—	4.2	0.017	1.19	0.0	0.00	6.51	0.01	2.047	16.64	0.00	13.2	86.4	0.3	-1.19	0.80	0.82	0.83	—	20228	5056	27	0	0	0	0	logfile
✔	7WN1	32619	2024-02-13	2022-01-17	3.11	3.41	—	3.3	0.007	0.65	0.0	0.04	13.83	0.00	2.246	7.77	0.00	3.7	96.3	0.0	1.00	0.64	0.87	3.64	3.3	0.003	0.55	0.0	0.04	15.99	0.00	2.143	8.41	3.02	3.7	96.3	0.0	1.84	0.89	0.65	0.89	3.19	3901	493	3	0	1	0	0	logfile
✔	7TKH	25969	2024-02-18	2022-01-17	4.4	7.29	4.45	4.2	0.019	2.19	0.0	0.00	6.81	0.01	2.385	0.08	0.00	3.9	94.7	1.4	-0.35	0.59	0.62	—	4.2	0.018	1.32	0.0	0.00	7.42	0.01	1.974	32.32	0.00	15.1	84.5	0.3	-2.28	1.70	0.83	0.84	—	20228	5056	27	0	0	0	0	logfile
✔	7TKo	25976	2024-02-18	2022-01-17	4.8	7.71	5.39	4.4	0.019	2.23	0.0	0.00	6.74	0.01	2.314	0.12	0.00	4.8	93.9	1.4	-0.54	0.62	0.65	—	4.4	0.004	0.84	0.0	0.00	5.80	0.00	2.139	12.52	0.00	10.1	89.6	0.2	-0.46	0.84	0.84	0.82	—	20229	5056	27	0	0	0	0	logfile
✔	7TKG	25968	2024-02-18	2022-01-17	4.5	7.60	4.79	4.2	0.019	2.20	0.0	0.00	6.95	0.01	2.361	0.08	0.00	4.3	94.2	1.5	-0.60	0.58	0.61	—	4.3	0.007	1.14	0.0	0.00	7.61	0.01	2.015	33.28	0.00	19.7	80.0	0.3	-3.26	2.09	0.77	0.80	—	20228	5056	27	0	0	0	0	logfile
✔	7TKP	25977	2024-02-18	2022-01-17	4.6	7.57	4.97	4.4	0.019	2.20	0.0	0.00	6.68	0.01	2.352	0.12	0.00	4.2	94.5	1.3	-0.50	0.60	0.63	—	4.4	0.004	0.83	0.0	0.00	5.67	0.00	2.069	13.64	0.00	9.3	90.5	0.2	-0.09	0.76	0.78	0.81	—	20228	5056	27	0	0	0	0	logfile
✔	7TJW	25934	2024-02-18	2022-01-17	4.0	3.71	4.05	3.8	0.003	0.64	0.0	0.05	13.06	0.00	1.855	2.42	0.00	2.2	97.8	0.0	0.19	0.61	0.79	—	3.8	0.003	0.65	0.0	0.04	16.04	0.00	1.878	9.24	3.75	3.3	96.7	0.0	0.67	0.62	0.62	0.80	—	22500	3097	12	0	10	0	0	logfile
✔	7WN0	32618	2024-02-13	2022-01-17	3.64	3.82	—	3.7	0.003	0.57	0.0	0.04	16.82	0.01	2.273	9.34	0.47	3.3	96.7	0.0	1.10	0.58	0.82	1.51	3.7	0.004	0.62	0.0	0.04	16.93	0.00	2.240	11.51	4.20	3.9	96.1	0.0	1.32	1.90	0.68	0.86	1.36	3879	494	2	0	0	0	0	logfile

• ← previous
• Page 250 of 588
• next →