Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7QTi	14141	2024-02-23	2022-01-14	3.04	3.98	—	3.7	0.004	0.71	1.0	0.05	15.36	0.01	2.151	8.80	0.91	5.5	94.2	0.3	-0.44	0.72	0.68	1.47	3.7	0.005	0.68	0.0	0.05	14.74	0.00	2.098	10.12	1.65	6.9	93.0	0.1	-0.60	0.50	0.75	0.76	1.56	40094	5061	31	0	64	0	0	logfile
✔	7WLJ	32585	2024-02-14	2022-01-13	3.9	4.18	—	4.1	0.009	1.01	0.0	0.14	16.92	0.00	1.912	18.90	0.10	6.7	93.3	0.0	0.03	0.59	0.80	1.62	4.1	0.005	0.89	0.0	0.05	15.86	0.00	2.145	17.91	1.79	6.9	93.1	0.0	-0.07	0.63	0.61	0.81	1.09	9450	1135	1	0	15	0	0	logfile
✔	7WLi	32584	2024-02-14	2022-01-13	3.3	3.59	—	3.6	0.012	1.01	1.0	0.06	15.40	0.01	1.888	15.00	0.20	7.3	92.5	0.2	-0.17	0.59	0.78	2.16	3.6	0.004	0.73	0.0	0.04	15.81	0.00	2.136	14.79	0.99	6.7	93.3	0.0	0.56	0.48	0.59	0.79	1.76	9493	1135	1	0	21	0	0	logfile
✔	7WLK	32586	2024-02-14	2022-01-13	3.6	3.50	—	3.6	0.010	0.99	0.0	0.06	15.42	0.00	1.853	14.07	0.10	6.7	93.3	0.0	0.27	0.72	0.79	1.77	3.6	0.004	0.71	0.0	0.04	15.88	0.00	2.182	11.20	2.39	4.8	95.2	0.0	1.33	1.18	0.72	0.78	1.02	9461	1135	1	0	17	0	0	logfile
✔	7WLE	32583	2024-02-14	2022-01-13	3.62	3.17	—	3.3	0.003	0.50	0.0	0.04	9.91	0.00	2.240	9.09	5.25	6.1	93.9	0.0	-3.62	0.78	0.75	1.67	3.4	0.004	0.76	0.0	0.04	14.84	0.00	2.141	17.17	4.09	6.5	93.5	0.0	-0.72	1.41	0.80	0.78	1.76	10188	1324	2	0	0	0	0	logfile
✔	7TiL	25913	2024-02-13	2022-01-13	3.7	4.37	3.77	4.0	0.002	0.54	0.0	0.04	13.78	0.00	2.253	8.12	0.00	3.8	96.2	0.0	0.14	0.87	0.79	1.33	4.0	0.003	0.70	0.0	0.04	15.91	0.00	2.213	12.52	1.15	4.5	95.5	0.0	0.52	1.75	0.88	0.84	1.85	5815	739	2	0	0	0	0	logfile
✔	7WLT	32592	2024-02-22	2022-01-13	3.46	3.71	—	3.8	0.011	1.11	0.0	0.06	16.10	0.01	2.142	20.69	0.89	5.9	93.9	0.2	1.88	0.65	0.80	2.30	3.8	0.004	0.65	0.0	0.04	16.35	0.00	2.147	9.78	1.86	5.6	94.4	0.0	1.46	0.47	0.65	0.82	1.83	33912	4059	6	0	27	0	0	logfile
✔	7WLC	32581	2024-02-13	2022-01-13	4.0	4.24	—	4.1	0.003	0.70	0.0	0.04	13.71	0.00	2.198	15.62	0.00	6.1	93.9	0.0	-1.35	0.71	0.77	—	4.1	0.004	0.76	0.0	0.05	16.01	0.00	2.156	17.48	3.34	9.4	90.6	0.0	-1.65	0.49	0.72	0.78	—	3307	430	3	0	0	0	0	logfile
✔	7WLR	32591	2024-02-15	2022-01-13	3.54	3.36	—	3.5	0.006	0.88	0.0	0.05	29.27	0.01	2.232	3.15	0.00	1.8	98.2	0.0	1.65	0.69	0.75	2.27	3.5	0.003	0.53	0.0	0.03	28.09	0.00	2.171	7.98	1.25	1.4	98.6	0.0	3.30	1.22	0.78	0.82	1.95	11922	754	10	290	0	0	0	logfile
✔	7TiK	25912	2024-02-13	2022-01-13	2.4	2.38	—	2.0	0.007	0.49	0.0	0.04	16.31	0.00	2.218	7.94	0.00	4.6	95.4	0.0	1.31	0.77	0.80	1.31	2.0	0.003	0.42	0.0	0.04	16.39	0.00	2.243	8.33	1.35	0.6	99.4	0.0	6.01	0.91	0.79	0.81	1.38	2565	339	6	0	0	0	0	logfile
✔	7WLL	32587	2024-02-14	2022-01-13	3.6	3.89	—	3.8	0.012	1.19	2.0	0.08	16.94	0.00	2.026	13.97	0.50	7.3	92.6	0.1	-0.42	0.60	0.81	1.99	3.8	0.004	0.85	0.0	0.06	16.93	0.00	2.181	12.63	1.49	6.5	93.5	0.0	0.84	1.17	0.59	0.81	1.52	9540	1135	1	0	21	0	0	logfile
✔	7TiB	25616	2024-02-18	2022-01-13	3.4	3.28	3.41	3.3	0.002	0.53	0.0	0.04	16.86	0.00	2.099	8.51	1.09	2.2	97.8	0.0	-1.97	0.64	0.79	1.73	3.2	0.005	0.66	0.0	0.04	18.59	0.00	1.872	11.30	3.14	3.8	96.2	0.0	0.22	0.50	0.64	0.83	2.04	21377	2581	15	42	9	0	0	logfile
✔	7WLA	32579	2024-02-14	2022-01-12	3.76	3.09	3.72	3.2	0.002	0.44	0.0	0.04	8.82	0.00	2.197	6.98	4.01	5.1	94.9	0.0	-4.06	0.70	0.68	0.60	3.2	0.004	0.78	0.0	0.05	14.15	0.00	2.116	18.82	3.83	7.4	92.6	0.1	-0.89	1.37	0.72	0.71	1.00	10193	1327	2	0	0	0	0	logfile
✔	7WL9	32578	2024-02-14	2022-01-12	3.78	3.44	—	3.5	0.002	0.49	0.0	0.04	9.09	0.00	2.201	6.64	4.27	4.6	95.3	0.1	-4.11	0.78	0.74	1.09	3.6	0.004	0.82	0.0	0.05	13.98	0.00	2.149	16.84	4.81	7.6	92.3	0.1	-0.43	0.85	0.78	0.77	1.39	10194	1327	3	0	1	0	0	logfile
✔	7QRU	14124	2024-02-16	2022-01-12	2.24	2.32	2.24	2.4	0.020	2.18	9.0	0.10	14.73	0.02	2.058	6.63	2.50	2.6	97.4	0.1	-1.62	0.79	0.91	4.88	2.4	0.003	0.58	0.0	0.04	15.63	0.00	2.174	5.89	1.49	1.0	99.0	0.0	2.33	1.14	0.79	0.90	3.95	16100	1957	18	0	3	360	0	logfile
✔	7THT	25904	2024-02-20	2022-01-12	3.42	3.67	—	3.6	0.014	1.88	27.0	0.11	13.97	0.02	1.285	8.40	3.00	6.7	92.8	0.6	-1.57	0.77	0.81	3.22	3.6	0.004	0.78	1.0	0.05	14.54	0.00	2.043	9.33	2.35	3.9	96.0	0.0	-0.71	1.24	0.79	0.84	2.58	28900	3651	25	0	60	0	0	logfile
✔	7WLB	32580	2024-02-14	2022-01-12	4.1	3.63	—	3.5	0.002	0.44	0.0	0.04	8.68	0.00	2.205	6.88	3.92	4.5	95.5	0.0	-4.05	0.74	0.72	—	3.4	0.004	0.71	0.0	0.04	11.24	0.00	2.157	18.00	0.00	6.4	93.5	0.1	-0.65	1.45	0.75	0.75	—	10193	1327	2	0	0	0	0	logfile
✔	7WL7	32576	2024-02-14	2022-01-12	3.51	3.41	—	3.5	0.002	0.50	0.0	0.04	8.84	0.00	2.214	5.97	3.39	4.6	95.3	0.1	-3.63	0.79	0.77	2.09	3.5	0.003	0.78	0.0	0.04	14.17	0.00	2.187	15.74	3.57	6.7	93.3	0.1	0.16	0.86	0.79	0.79	1.70	10198	1330	2	0	0	0	0	logfile
✔	7WL2	32574	2024-02-14	2022-01-12	3.25	2.44	—	2.9	0.002	0.49	0.0	0.04	8.51	0.00	2.207	6.40	2.14	4.9	95.0	0.1	-4.09	0.76	0.76	3.15	2.2	0.004	0.68	0.0	0.04	14.84	0.00	2.111	10.83	4.55	6.2	93.6	0.2	0.14	0.59	0.80	0.81	2.51	10198	1330	2	0	0	0	0	logfile
✔	7WL8	32577	2024-02-14	2022-01-12	3.4	3.22	—	3.4	0.002	0.49	0.0	0.04	9.00	0.00	2.251	6.35	1.87	4.6	95.3	0.1	-3.89	0.83	0.80	2.71	3.3	0.005	1.03	2.0	0.06	14.17	0.01	1.858	14.83	3.57	5.9	93.9	0.2	0.13	1.33	0.84	0.84	2.52	10198	1330	2	0	0	0	0	logfile

• ← previous
• Page 252 of 588
• next →