Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7FHN	31587	2024-02-17	2021-07-29	3.3	3.55	—	3.4	0.004	0.65	0.0	0.04	13.87	0.00	2.107	10.58	0.09	3.4	96.6	0.0	1.66	0.73	0.76	2.66	3.4	0.003	0.63	0.0	0.04	16.51	0.00	2.126	12.17	1.73	2.7	97.3	0.0	2.41	0.56	0.75	0.80	2.02	10648	1294	4	0	6	0	0	logfile
✔	7FHL	31586	2024-02-16	2021-07-29	3.1	3.71	—	3.6	0.002	0.55	0.0	0.03	12.50	0.00	2.150	6.83	0.00	1.2	98.8	0.0	1.13	0.70	0.81	1.99	3.6	0.003	0.57	0.0	0.04	14.72	0.00	2.153	7.92	2.19	2.2	97.8	0.0	2.27	0.44	0.69	0.82	1.64	11058	1326	6	0	28	0	0	logfile
✔	7FH1	31584	2024-02-15	2021-07-29	3.34	3.67	—	3.6	0.009	1.20	9.0	0.07	21.25	0.02	2.200	19.78	3.15	14.2	85.8	0.0	-3.88	0.76	0.84	3.13	3.6	0.003	0.74	0.0	0.04	15.90	0.00	2.178	7.02	2.15	8.9	91.1	0.0	-0.93	1.97	0.75	0.88	2.69	13672	1748	10	0	22	0	0	logfile
✔	7RNN	24580	2024-02-13	2021-07-29	2.86	2.05	—	3.2	0.008	0.80	0.0	0.14	14.96	0.00	1.929	6.74	0.55	3.4	96.6	0.0	-1.11	0.50	0.76	5.00	3.2	0.005	0.65	0.0	0.04	15.49	0.00	2.242	6.08	1.91	1.9	98.1	0.0	0.44	0.48	0.49	0.87	4.00	4000	540	2	0	2	0	0	logfile
✔	7P9U	13266	2024-02-13	2021-07-28	3.7	3.88	3.67	3.8	0.003	0.68	0.0	0.04	14.10	0.00	2.188	11.55	0.00	6.8	92.8	0.4	1.01	0.51	0.75	1.02	3.8	0.003	0.74	0.0	0.04	16.29	0.00	2.140	12.18	2.80	6.6	93.2	0.2	0.60	0.38	0.52	0.76	1.15	3943	503	2	0	0	0	0	logfile
✔	7P9V	13267	2024-02-13	2021-07-28	3.4	3.60	3.36	3.5	0.005	0.82	0.0	0.05	15.25	0.01	2.104	15.53	0.00	11.5	88.5	0.0	-2.67	0.62	0.78	1.97	3.5	0.003	0.70	0.0	0.04	15.93	0.00	2.150	11.85	3.08	8.4	91.6	0.0	-1.12	1.27	0.64	0.80	1.69	7286	919	6	0	8	0	0	logfile
✔	7FGH	31581	2024-02-24	2021-07-27	2.18	2.32	—	2.3	0.009	1.06	0.0	0.06	16.27	0.01	2.118	1.61	1.31	3.8	96.2	0.0	-0.25	0.77	0.80	5.03	2.3	0.003	0.60	0.0	0.04	16.42	0.00	2.228	1.90	1.15	2.7	97.3	0.0	0.32	1.24	0.82	0.89	4.71	44532	5448	36	12	12	1416	0	logfile
✔	7RMH	24570	2024-02-14	2021-07-27	3.1	4.02	3.03	3.9	0.004	0.75	0.0	0.05	13.42	0.01	2.290	2.56	0.00	4.1	95.9	0.0	-1.32	0.74	0.80	2.69	3.9	0.002	0.54	0.0	0.04	15.06	0.00	2.199	4.84	1.24	3.0	96.9	0.1	0.68	0.54	0.66	0.79	2.21	7434	986	6	0	1	0	0	logfile
✔	7FGG	31580	2024-02-24	2021-07-27	2.19	2.26	—	2.2	0.010	1.08	0.0	0.06	17.52	0.01	2.005	2.63	2.08	3.8	96.2	0.0	-0.12	0.76	0.80	5.14	2.2	0.003	0.65	0.0	0.05	17.51	0.00	1.964	1.92	1.88	3.3	96.7	0.0	0.62	0.30	0.80	0.89	5.06	45132	5424	36	0	36	1764	0	logfile
✔	7RMG	24569	2024-02-14	2021-07-27	3.0	3.53	2.91	3.4	0.004	0.76	0.0	0.05	12.65	0.01	2.290	3.72	0.14	2.7	97.3	0.0	-0.92	0.75	0.80	3.48	3.4	0.003	0.56	0.0	0.04	14.70	0.00	2.175	5.34	2.06	1.8	98.2	0.0	0.96	0.96	0.75	0.87	3.59	7316	968	6	0	1	0	0	logfile
✔	7RMi	24572	2024-02-14	2021-07-27	3.2	3.78	3.15	3.7	0.004	0.84	0.0	0.05	12.68	0.01	2.296	4.36	0.00	3.4	96.6	0.0	-1.03	0.69	0.72	2.32	3.7	0.003	0.58	0.0	0.04	14.49	0.00	2.202	7.94	1.71	2.8	97.2	0.0	0.64	0.96	0.66	0.77	2.11	7205	960	6	0	1	0	0	logfile
✔	7FGi	31582	2024-02-24	2021-07-27	2.51	2.92	—	2.7	0.012	0.87	0.0	0.05	16.88	0.00	1.814	1.37	2.16	3.0	97.0	0.0	-0.36	0.77	0.79	3.39	2.7	0.002	0.50	0.0	0.04	16.77	0.00	2.197	1.32	0.81	1.6	98.4	0.0	0.54	0.32	0.85	0.91	3.87	42288	5256	24	24	36	0	0	logfile
✔	7RLo	24535	2024-02-20	2021-07-26	2.6	3.29	—	3.2	0.002	0.49	0.0	0.04	14.09	0.00	2.132	5.83	3.01	4.4	95.6	0.1	-2.08	0.78	0.85	2.76	3.2	0.007	0.72	0.0	0.05	15.30	0.00	2.175	7.46	2.25	5.2	94.7	0.1	0.37	0.98	0.76	0.86	3.64	28707	3670	12	0	0	0	0	logfile
✔	7FGF	31579	2024-02-14	2021-07-26	2.8	2.93	—	3.0	0.006	0.77	0.0	0.05	14.36	0.01	2.295	8.04	0.00	6.9	93.1	0.0	-1.60	0.68	0.86	4.69	3.0	0.003	0.57	0.0	0.04	17.24	0.00	2.216	8.39	2.39	6.2	93.8	0.0	-1.13	0.33	0.70	0.87	4.00	10143	1296	3	0	0	0	0	logfile
✔	7P9B	13261	2024-02-14	2021-07-26	2.45	2.64	2.53	2.6	0.009	0.77	0.0	0.05	10.59	0.01	1.733	7.36	0.93	2.5	97.5	0.0	-1.21	0.79	0.88	6.15	2.6	0.004	0.55	0.0	0.04	15.00	0.00	2.106	6.15	1.32	2.3	97.7	0.0	0.98	0.43	0.81	0.91	5.30	60290	7550	10	0	0	0	0	logfile
✔	7FG2	31574	2024-02-14	2021-07-25	4.4	3.87	—	3.9	0.007	1.13	0.0	0.05	14.43	0.01	2.053	32.64	0.19	17.8	81.7	0.4	-3.95	0.38	0.65	—	3.9	0.003	0.74	0.0	0.05	14.60	0.00	2.135	17.08	0.00	13.0	86.8	0.3	-2.70	0.70	0.37	0.63	—	9342	1202	2	0	0	0	0	logfile
✔	7FG3	31577	2024-02-14	2021-07-25	3.9	3.62	—	4.0	0.006	1.13	0.0	0.06	14.47	0.01	1.929	37.29	0.00	18.5	80.8	0.7	-4.60	0.22	0.47	-0.27	4.0	0.004	0.90	0.0	0.05	16.67	0.01	2.017	24.21	3.48	15.3	84.1	0.6	-3.68	0.72	0.23	0.46	0.35	9054	1166	2	0	0	0	0	logfile
✔	7P8N	13254	2024-02-18	2021-07-23	2.8	2.25	2.70	2.4	0.003	0.51	0.0	0.04	14.49	0.00	1.936	4.40	0.00	3.8	96.1	0.1	0.45	0.68	0.80	3.30	2.4	0.003	0.58	0.0	0.04	17.10	0.00	2.164	6.75	1.72	3.6	96.4	0.1	0.18	0.35	0.69	0.84	3.17	21429	2681	18	0	23	356	0	logfile
✔	7FFQ	31571	2024-02-19	2021-07-23	3.5	3.66	—	3.6	0.007	0.93	0.0	0.06	9.31	0.01	2.267	4.48	0.18	6.5	93.5	0.1	-3.45	0.48	0.76	2.43	3.6	0.004	0.69	0.0	0.04	14.03	0.00	2.129	10.69	2.80	6.2	93.7	0.1	-0.98	0.98	0.50	0.84	2.54	24808	3208	12	0	0	0	0	logfile
✔	7RLF	24528	2024-02-22	2021-07-23	3.1	3.36	—	3.0	0.004	0.58	0.0	0.04	15.18	0.00	2.042	12.48	0.19	3.9	95.9	0.3	0.50	0.85	0.83	2.17	3.0	0.005	0.58	0.0	0.04	15.47	0.00	1.958	9.71	1.48	3.5	96.4	0.1	0.86	0.40	0.89	0.89	2.38	34578	4368	12	0	24	0	0	logfile

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