Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7RLi	24531	2024-02-17	2021-07-23	3.1	3.39	—	2.6	0.005	0.95	0.0	0.05	16.84	0.01	1.481	17.49	0.00	5.3	94.4	0.3	-1.57	0.88	0.82	1.37	2.7	0.005	0.72	0.0	0.05	17.48	0.00	2.015	15.47	2.07	4.7	95.1	0.3	-0.86	1.54	0.90	0.88	1.91	69768	8820	24	0	24	0	0	logfile
✔	7FFo	31570	2024-02-14	2021-07-23	3.5	3.58	—	3.6	0.007	0.94	0.0	0.06	9.50	0.01	1.293	5.69	0.33	6.6	93.3	0.1	-2.95	0.44	0.78	3.07	3.6	0.003	0.64	0.0	0.04	14.17	0.00	2.263	8.26	2.22	4.9	95.1	0.0	-0.51	1.58	0.48	0.84	2.85	8255	1067	4	0	0	0	0	logfile
✔	7RLH	24530	2024-02-22	2021-07-23	3.0	3.28	—	2.9	0.004	0.61	0.0	0.04	13.64	0.00	1.783	13.77	0.00	4.1	95.7	0.3	0.36	0.87	0.84	2.26	2.8	0.006	0.66	0.0	0.05	15.43	0.00	1.880	13.09	1.48	4.7	95.1	0.3	0.64	0.49	0.90	0.89	2.38	34584	4368	12	0	24	0	0	logfile
✔	7RLD	24526	2024-02-22	2021-07-23	3.4	3.68	—	3.1	0.002	0.66	0.0	0.04	14.57	0.00	1.692	7.65	0.00	3.8	96.0	0.1	-1.35	0.87	0.78	1.31	3.2	0.006	0.73	0.0	0.04	15.29	0.00	2.051	12.40	1.04	5.5	94.5	0.0	-0.50	2.42	0.90	0.87	2.07	34854	4410	12	0	12	0	0	logfile
✔	7RL9	24522	2024-02-22	2021-07-23	3.3	3.87	—	3.6	0.003	0.73	0.0	0.04	11.05	0.00	2.210	9.51	0.00	8.1	91.6	0.3	-1.82	0.82	0.81	1.73	3.6	0.003	0.61	0.0	0.04	12.15	0.00	2.194	8.11	1.37	7.6	92.4	0.0	-0.67	1.20	0.83	0.85	2.01	35220	4464	12	0	12	0	0	logfile
✔	7FFF	31567	2024-02-22	2021-07-23	3.0	3.22	—	3.2	0.007	0.96	4.0	0.07	9.59	0.01	1.924	5.51	0.40	6.6	93.2	0.1	-3.27	0.49	0.80	3.17	3.2	0.003	0.66	0.0	0.04	14.52	0.00	2.092	8.27	2.52	5.2	94.7	0.1	-0.54	1.47	0.48	0.85	2.82	34356	4448	24	0	4	0	0	logfile
✔	7RLJ	24532	2024-02-17	2021-07-23	3.8	4.28	—	3.7	0.004	0.92	0.0	0.05	15.19	0.01	2.067	15.59	0.01	6.2	93.2	0.6	-2.67	0.86	0.79	0.25	3.7	0.005	0.73	0.0	0.05	16.26	0.00	1.891	19.14	2.36	7.9	91.9	0.2	-1.33	1.27	0.89	0.85	0.92	69156	8736	24	0	36	0	0	logfile
✔	7FFN	31569	2024-02-14	2021-07-23	3.0	3.15	—	3.1	0.007	0.95	0.0	0.06	9.73	0.01	1.924	5.72	0.53	6.6	93.3	0.1	-3.00	0.39	0.80	3.34	3.1	0.006	0.98	0.0	0.05	14.57	0.01	2.184	7.31	2.87	6.1	93.9	0.0	-0.55	1.53	0.41	0.88	3.43	8589	1112	6	0	1	0	0	logfile
✔	7FFQ	31571	2024-02-19	2021-07-23	3.5	3.66	—	3.6	0.007	0.93	0.0	0.06	9.31	0.01	2.267	4.48	0.18	6.5	93.5	0.1	-3.45	0.48	0.76	2.43	3.6	0.004	0.69	0.0	0.04	14.03	0.00	2.129	10.69	2.80	6.2	93.7	0.1	-0.98	0.98	0.50	0.84	2.54	24808	3208	12	0	0	0	0	logfile
✔	7RLF	24528	2024-02-22	2021-07-23	3.1	3.36	—	3.0	0.004	0.58	0.0	0.04	15.18	0.00	2.042	12.48	0.19	3.9	95.9	0.3	0.50	0.85	0.83	2.17	3.0	0.005	0.58	0.0	0.04	15.47	0.00	1.958	9.71	1.48	3.5	96.4	0.1	0.86	0.40	0.89	0.89	2.38	34578	4368	12	0	24	0	0	logfile
✔	7RLC	24525	2024-02-22	2021-07-23	3.2	3.75	—	3.2	0.003	0.65	0.0	0.04	10.11	0.00	0.891	7.51	0.00	5.3	94.4	0.3	-1.71	0.83	0.79	1.78	3.2	0.003	0.58	0.0	0.04	11.64	0.00	1.897	6.18	0.80	4.8	95.2	0.0	-0.20	1.27	0.89	0.89	2.34	34980	4422	12	0	24	0	0	logfile
✔	7P8N	13254	2024-02-18	2021-07-23	2.8	2.25	2.70	2.4	0.003	0.51	0.0	0.04	14.49	0.00	1.936	4.40	0.00	3.8	96.1	0.1	0.45	0.68	0.80	3.30	2.4	0.003	0.58	0.0	0.04	17.10	0.00	2.164	6.75	1.72	3.6	96.4	0.1	0.18	0.35	0.69	0.84	3.17	21429	2681	18	0	23	356	0	logfile
✔	7P8W	13256	2024-02-17	2021-07-23	2.2	2.34	—	2.3	0.014	1.79	4.0	0.09	14.82	0.01	2.340	1.55	0.75	3.8	96.0	0.2	-1.36	0.85	0.92	6.91	2.3	0.003	0.60	0.0	0.04	15.17	0.00	2.233	2.97	0.23	3.0	97.0	0.0	0.71	1.12	0.85	0.91	6.36	17668	2008	12	0	8	1110	0	logfile
✔	7RL4	24514	2024-02-13	2021-07-23	2.86	2.50	—	3.1	0.015	1.16	0.0	0.07	16.04	0.01	2.535	12.04	0.00	12.5	87.5	0.0	-4.62	0.39	0.82	4.55	3.0	0.015	1.14	0.0	0.06	16.73	0.01	2.321	16.56	7.25	9.2	90.8	0.0	-4.77	0.68	0.39	0.85	5.54	4620	680	20	0	0	0	0	logfile
✔	7P92	13258	2024-02-14	2021-07-23	2.7	2.17	2.57	2.3	0.003	0.56	1.0	0.04	14.12	0.00	1.985	4.69	0.18	3.7	96.3	0.0	0.23	0.52	0.78	3.78	2.3	0.003	0.55	0.0	0.04	17.00	0.00	2.130	6.35	1.10	3.0	97.0	0.0	0.52	1.69	0.54	0.82	3.61	10436	1322	9	0	12	157	0	logfile
✔	7RL6	24518	2024-02-22	2021-07-23	3.7	4.07	—	3.2	0.003	0.72	0.0	0.04	15.39	0.00	1.941	10.23	0.32	4.9	94.8	0.3	-1.82	0.87	0.77	0.55	3.3	0.004	0.78	1.0	0.05	15.82	0.00	2.146	13.38	2.35	4.2	95.5	0.3	-0.72	1.53	0.88	0.82	0.86	34854	4410	12	0	12	0	0	logfile
✔	7RLB	24524	2024-02-22	2021-07-23	3.3	3.56	—	3.2	0.004	0.75	0.0	0.04	14.61	0.00	2.259	10.02	0.03	3.8	96.0	0.3	-1.67	0.80	0.68	0.64	3.2	0.003	0.63	0.0	0.04	15.97	0.00	2.170	11.44	2.13	3.6	96.3	0.1	-0.66	1.84	0.89	0.87	1.56	34884	4410	12	0	12	0	0	logfile
✔	7FFE	31566	2024-02-22	2021-07-23	3.5	3.89	—	3.9	0.007	0.93	0.0	0.06	9.40	0.01	2.211	4.93	0.28	6.6	93.3	0.1	-3.34	0.51	0.79	2.77	3.8	0.003	0.68	0.0	0.04	14.22	0.00	2.125	9.85	2.46	5.3	94.6	0.1	-0.56	2.44	0.50	0.83	2.26	33063	4275	16	0	0	0	0	logfile
✔	7RLA	24523	2024-02-22	2021-07-23	3.1	3.89	—	3.4	0.003	0.78	0.0	0.05	13.99	0.00	2.035	10.00	0.03	7.5	92.5	0.0	-1.72	0.79	0.79	1.20	3.4	0.004	0.59	0.0	0.04	15.23	0.00	1.884	9.40	1.65	5.7	94.3	0.0	-0.11	1.23	0.83	0.86	1.37	34944	4422	12	0	24	0	0	logfile
✔	7RL7	24519	2024-02-22	2021-07-23	3.0	3.48	—	3.0	0.003	0.68	0.0	0.04	15.61	0.00	2.057	11.36	0.00	6.2	93.8	0.0	-1.11	0.85	0.82	2.05	3.0	0.003	0.59	0.0	0.04	16.02	0.00	1.975	9.56	1.57	5.0	95.0	0.0	-0.19	0.41	0.88	0.87	2.10	34950	4422	12	0	24	0	0	logfile

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