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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8SUR | 40776 | 2024-04-11 | 2023-05-13 | 3.1 | 3.44 | 3.20 | 3.4 | 0.007 | 0.85 | 8.0 | 0.08 | 14.51 | 0.01 | 1.256 | 7.20 | 0.65 | 3.9 | 95.7 | 0.4 | 1.04 | 0.57 | 0.79 | 3.03 | 3.4 | 0.005 | 0.60 | 1.0 | 0.05 | 15.06 | 0.00 | 1.824 | 7.15 | 1.30 | 3.9 | 95.8 | 0.2 | 1.05 | 1.05 | 0.57 | 0.84 | 3.22 | 23085 | 1417 | 6 | 0 | 15 | 0 | 11381 | logfile |
✔ | 8JD9 | 36077 | 2024-04-09 | 2023-05-13 | 2.87 | 3.05 | 2.89 | 3.1 | 0.002 | 0.56 | 0.0 | 0.04 | 13.88 | 0.01 | 2.162 | 9.02 | 0.06 | 5.2 | 94.4 | 0.3 | 1.03 | 0.64 | 0.78 | 1.95 | 3.1 | 0.004 | 0.62 | 0.0 | 0.04 | 16.30 | 0.01 | 2.124 | 11.22 | 1.85 | 5.3 | 94.4 | 0.3 | 1.08 | 1.14 | 0.65 | 0.81 | 1.62 | 14725 | 1870 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 8SUW | 40778 | 2024-04-06 | 2023-05-13 | 3.15 | 3.47 | 3.37 | 3.5 | 0.002 | 0.50 | 0.0 | 0.04 | 15.08 | 0.00 | 2.072 | 3.17 | 0.00 | 4.2 | 95.8 | 0.0 | -0.75 | 0.72 | 0.78 | 2.66 | 3.5 | 0.002 | 0.51 | 0.0 | 0.04 | 16.22 | 0.00 | 2.065 | 4.23 | 1.07 | 4.6 | 95.4 | 0.0 | -0.51 | 0.45 | 0.74 | 0.83 | 2.15 | 56577 | 7035 | 31 | 0 | 18 | 0 | 0 | logfile |
✔ | 8JDA | 36076 | 2024-04-06 | 2023-05-13 | 3.67 | 3.84 | 3.41 | 3.8 | 0.004 | 0.78 | 0.0 | 0.04 | 14.02 | 0.00 | 2.176 | 14.34 | 0.14 | 5.7 | 94.2 | 0.1 | -1.44 | 0.58 | 0.70 | 0.59 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 16.24 | 0.00 | 2.230 | 14.94 | 3.00 | 4.5 | 95.5 | 0.0 | -0.18 | 0.45 | 0.57 | 0.70 | 0.59 | 6526 | 848 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SUX | 40779 | 2024-04-10 | 2023-05-13 | 2.93 | 3.14 | 2.96 | 3.2 | 0.003 | 0.53 | 0.0 | 0.04 | 15.61 | 0.00 | 2.166 | 3.82 | 0.00 | 4.0 | 96.0 | 0.0 | -0.31 | 0.56 | 0.70 | 2.87 | 3.2 | 0.002 | 0.54 | 0.0 | 0.04 | 17.92 | 0.00 | 2.120 | 5.71 | 2.31 | 3.6 | 96.4 | 0.0 | -0.51 | 0.49 | 0.64 | 0.79 | 2.34 | 18101 | 2231 | 10 | 0 | 4 | 0 | 0 | logfile |
✔ | 8SUG | 40765 | 2024-04-06 | 2023-05-12 | 4.2 | 4.70 | 4.24 | 4.6 | 0.002 | 0.73 | 0.0 | 0.04 | 13.57 | 0.00 | 2.137 | 16.90 | 0.13 | 8.4 | 91.3 | 0.3 | -2.39 | 0.51 | 0.77 | — | 4.6 | 0.003 | 0.76 | 0.0 | 0.04 | 13.56 | 0.00 | 2.032 | 20.36 | 0.24 | 9.4 | 90.4 | 0.2 | -0.50 | 0.86 | 0.51 | 0.78 | — | 113355 | 15972 | 33 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SUN | 40768 | 2024-04-11 | 2023-05-12 | 3.12 | 3.51 | 3.31 | 3.5 | 0.004 | 0.64 | 1.0 | 0.06 | 14.22 | 0.00 | 1.130 | 8.68 | 0.40 | 4.6 | 95.3 | 0.1 | 0.78 | 0.58 | 0.76 | 2.16 | 3.5 | 0.003 | 0.53 | 1.0 | 0.04 | 15.04 | 0.00 | 1.854 | 7.49 | 0.48 | 4.6 | 95.4 | 0.0 | 1.08 | 0.94 | 0.59 | 0.80 | 2.27 | 23420 | 1442 | 4 | 0 | 10 | 0 | 11544 | logfile |
✔ | 8JCX | 36168 | 2024-04-07 | 2023-05-12 | 3.0 | 3.21 | 3.01 | 3.2 | 0.003 | 0.53 | 0.0 | 0.18 | 13.65 | 0.00 | 2.225 | 5.75 | 0.00 | 4.9 | 95.1 | 0.0 | 0.35 | 0.64 | 0.76 | 2.67 | 3.2 | 0.003 | 0.55 | 0.0 | 0.04 | 13.93 | 0.00 | 2.187 | 6.46 | 2.96 | 5.5 | 94.5 | 0.0 | 0.29 | 1.14 | 0.65 | 0.80 | 2.82 | 10617 | 1512 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8JD5 | 36176 | 2024-04-10 | 2023-05-12 | 3.6 | 3.48 | — | 3.5 | 0.005 | 0.64 | 1.0 | 0.04 | 14.13 | 0.00 | 2.201 | 9.27 | 0.39 | 6.7 | 93.2 | 0.1 | -0.84 | 0.62 | 0.68 | 1.58 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 15.06 | 0.00 | 2.144 | 10.47 | 2.97 | 7.8 | 92.2 | 0.0 | -0.98 | 0.58 | 0.69 | 0.73 | 1.63 | 18028 | 2389 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 8JCV | 36166 | 2024-04-07 | 2023-05-12 | 3.4 | 3.66 | 3.32 | 3.6 | 0.003 | 0.56 | 0.0 | 0.19 | 14.87 | 0.00 | 2.300 | 7.05 | 0.11 | 4.5 | 95.5 | 0.0 | 1.15 | 0.67 | 0.72 | 1.48 | 3.6 | 0.004 | 0.63 | 0.0 | 0.04 | 14.84 | 0.00 | 2.209 | 9.56 | 2.15 | 6.3 | 93.7 | 0.0 | 0.46 | 0.53 | 0.70 | 0.79 | 1.91 | 10667 | 1514 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8JD4 | 36175 | 2024-04-07 | 2023-05-12 | 2.9 | 3.04 | 2.81 | 3.0 | 0.003 | 0.53 | 0.0 | 0.04 | 13.24 | 0.00 | 2.289 | 6.36 | 0.20 | 3.6 | 96.4 | 0.0 | -0.19 | 0.70 | 0.79 | 1.70 | 3.0 | 0.004 | 0.63 | 0.0 | 0.04 | 14.55 | 0.00 | 2.141 | 9.27 | 1.93 | 4.8 | 95.2 | 0.1 | 0.35 | 2.18 | 0.73 | 0.85 | 2.45 | 10674 | 1494 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 8JD6 | 36177 | 2024-04-09 | 2023-05-12 | 3.4 | 3.44 | — | 3.4 | 0.003 | 0.57 | 0.0 | 0.04 | 15.11 | 0.00 | 2.218 | 12.40 | 0.35 | 5.9 | 94.0 | 0.0 | -0.74 | 0.62 | 0.65 | 0.86 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 16.03 | 0.00 | 2.096 | 15.33 | 3.92 | 7.4 | 92.5 | 0.0 | -1.23 | 1.59 | 0.67 | 0.73 | 1.30 | 17192 | 2312 | 8 | 0 | 1 | 0 | 0 | logfile |
✔ | 8JD0 | 36171 | 2024-04-07 | 2023-05-12 | 3.3 | 3.56 | 3.24 | 3.5 | 0.004 | 0.49 | 0.0 | 0.04 | 13.56 | 0.00 | 2.278 | 5.98 | 0.10 | 4.3 | 95.7 | 0.0 | 0.18 | 0.66 | 0.69 | 1.55 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 14.15 | 0.00 | 2.207 | 9.65 | 2.59 | 5.7 | 94.3 | 0.0 | -0.95 | 0.41 | 0.70 | 0.79 | 2.32 | 11264 | 1532 | 4 | 0 | 12 | 0 | 0 | logfile |
✔ | 8JD3 | 36174 | 2024-04-09 | 2023-05-12 | 3.3 | 3.50 | 3.27 | 3.5 | 0.004 | 0.53 | 0.0 | 0.10 | 13.40 | 0.00 | 2.210 | 6.60 | 0.13 | 4.0 | 96.0 | 0.0 | -0.23 | 0.62 | 0.64 | 1.75 | 3.5 | 0.005 | 0.66 | 0.0 | 0.04 | 15.01 | 0.00 | 2.141 | 10.15 | 3.27 | 6.2 | 93.8 | 0.0 | -0.78 | 0.54 | 0.65 | 0.70 | 1.67 | 15770 | 2148 | 7 | 0 | 5 | 0 | 0 | logfile |
✔ | 8JCW | 36167 | 2024-04-07 | 2023-05-12 | 3.0 | 3.17 | 2.95 | 3.1 | 0.003 | 0.61 | 0.0 | 0.17 | 13.68 | 0.00 | 2.218 | 5.90 | 0.22 | 5.5 | 94.5 | 0.0 | 0.47 | 0.69 | 0.77 | 1.98 | 3.1 | 0.004 | 0.64 | 0.0 | 0.04 | 14.33 | 0.00 | 2.127 | 7.79 | 4.13 | 6.5 | 93.4 | 0.1 | 0.00 | 1.16 | 0.73 | 0.84 | 2.53 | 10760 | 1527 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 8JCY | 36169 | 2024-04-07 | 2023-05-12 | 2.9 | 3.07 | 2.88 | 3.1 | 0.003 | 0.53 | 0.0 | 0.17 | 12.99 | 0.00 | 2.200 | 6.04 | 0.00 | 4.2 | 95.8 | 0.0 | 0.76 | 0.64 | 0.71 | 2.52 | 3.1 | 0.003 | 0.62 | 0.0 | 0.04 | 13.62 | 0.00 | 2.138 | 6.44 | 2.51 | 5.2 | 94.8 | 0.0 | -0.07 | 0.42 | 0.69 | 0.79 | 2.69 | 10874 | 1525 | 4 | 0 | 11 | 0 | 0 | logfile |
✔ | 8JD1 | 36172 | 2024-04-07 | 2023-05-12 | 3.7 | 3.87 | 3.63 | 3.8 | 0.002 | 0.50 | 0.0 | 0.04 | 12.60 | 0.00 | 2.228 | 6.47 | 0.21 | 6.8 | 93.2 | 0.0 | -0.72 | 0.66 | 0.71 | 1.21 | 3.8 | 0.003 | 0.66 | 0.0 | 0.04 | 14.51 | 0.00 | 2.159 | 12.34 | 2.66 | 7.4 | 92.6 | 0.0 | -0.98 | 1.21 | 0.65 | 0.69 | 1.44 | 10766 | 1508 | 4 | 0 | 7 | 0 | 0 | logfile |
✔ | 8JD2 | 36173 | 2024-04-07 | 2023-05-12 | 2.8 | 2.97 | 2.79 | 3.0 | 0.002 | 0.44 | 0.0 | 0.04 | 14.98 | 0.00 | 2.213 | 4.22 | 0.20 | 4.9 | 95.1 | 0.0 | -0.38 | 0.66 | 0.79 | 3.20 | 3.0 | 0.003 | 0.53 | 0.0 | 0.04 | 14.43 | 0.00 | 2.137 | 6.08 | 3.23 | 6.1 | 93.9 | 0.0 | -0.12 | 0.41 | 0.64 | 0.81 | 2.94 | 10730 | 1501 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8JCZ | 36170 | 2024-04-07 | 2023-05-12 | 3.0 | 3.18 | 2.98 | 3.2 | 0.003 | 0.57 | 0.0 | 0.18 | 14.97 | 0.00 | 2.247 | 9.10 | 0.22 | 4.4 | 95.6 | 0.0 | 0.07 | 0.65 | 0.75 | 2.15 | 3.2 | 0.003 | 0.54 | 0.0 | 0.04 | 14.04 | 0.00 | 2.255 | 7.28 | 1.95 | 5.5 | 94.5 | 0.0 | -0.20 | 0.36 | 0.65 | 0.80 | 2.24 | 10540 | 1504 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8JCU | 36165 | 2024-04-07 | 2023-05-12 | 2.8 | 3.00 | 2.76 | 3.2 | 0.003 | 0.54 | 0.0 | 0.18 | 14.09 | 0.00 | 2.268 | 5.39 | 0.00 | 4.1 | 95.9 | 0.0 | 0.18 | 0.63 | 0.74 | 2.60 | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 14.50 | 0.00 | 2.175 | 6.52 | 2.00 | 4.4 | 95.6 | 0.0 | -0.12 | 0.45 | 0.64 | 0.78 | 2.62 | 10830 | 1527 | 4 | 0 | 4 | 0 | 0 | logfile |