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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8JHU | 36294 | 2023-09-28 | 2023-05-25 | 3.1 | 3.30 | 3.08 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.64 | 0.01 | 2.200 | 10.88 | 0.82 | 5.4 | 94.1 | 0.5 | -0.27 | 0.69 | 0.84 | 2.83 | 3.3 | 0.005 | 0.60 | 0.0 | 0.04 | 16.05 | 0.00 | 2.160 | 10.95 | 0.55 | 6.4 | 93.6 | 0.0 | 0.04 | 0.37 | 0.70 | 0.87 | 3.37 | 6554 | 811 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JHU | 36294 | 2023-10-03 | 2023-05-25 | 3.1 | 3.30 | 3.08 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.64 | 0.01 | 2.200 | 10.88 | 0.82 | 5.4 | 94.1 | 0.5 | -0.27 | 0.69 | 0.84 | 2.83 | 3.3 | 0.005 | 0.60 | 0.0 | 0.04 | 16.05 | 0.00 | 2.160 | 10.95 | 0.55 | 6.4 | 93.6 | 0.0 | 0.04 | 0.37 | 0.70 | 0.87 | 3.37 | 6554 | 811 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JHU | 36294 | 2023-11-14 | 2023-05-25 | 3.1 | 3.30 | 3.08 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.64 | 0.01 | 2.200 | 10.88 | 0.82 | 5.4 | 94.1 | 0.5 | -0.27 | 0.69 | 0.84 | 2.83 | 3.3 | 0.005 | 0.60 | 0.0 | 0.04 | 16.05 | 0.00 | 2.160 | 10.95 | 0.55 | 6.4 | 93.6 | 0.0 | 0.04 | 0.37 | 0.70 | 0.87 | 3.37 | 6554 | 811 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JHU | 36294 | 2023-12-08 | 2023-05-25 | 3.1 | 3.30 | 3.08 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.64 | 0.01 | 2.200 | 10.88 | 0.82 | 5.4 | 94.1 | 0.5 | -0.27 | 0.69 | 0.84 | 2.83 | 3.3 | 0.005 | 0.60 | 0.0 | 0.04 | 16.05 | 0.00 | 2.160 | 10.95 | 0.55 | 6.4 | 93.6 | 0.0 | 0.04 | 0.37 | 0.70 | 0.87 | 3.37 | 6554 | 811 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8W77 | 37336 | 2024-03-10 | 2023-08-30 | 3.61 | 4.00 | 3.49 | 3.9 | 0.004 | 0.71 | 0.0 | 0.05 | 10.06 | 0.01 | 2.463 | 0.72 | 0.00 | 0.8 | 99.2 | 0.0 | 2.45 | 0.51 | 0.74 | 3.54 | 3.9 | 0.003 | 0.55 | 0.0 | 0.04 | 11.02 | 0.01 | 2.401 | 2.51 | 2.22 | 1.6 | 98.4 | 0.0 | 3.79 | 0.88 | 0.58 | 0.78 | 2.79 | 1601 | 260 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EDN | 28037 | 2023-12-07 | 2022-09-05 | 3.8 | 3.47 | 3.75 | 3.3 | 0.002 | 0.58 | 0.0 | 0.04 | 11.31 | 0.00 | 2.205 | 6.81 | 0.46 | 5.7 | 94.1 | 0.2 | 2.77 | 0.65 | 0.60 | 0.13 | 3.3 | 0.003 | 0.68 | 0.0 | 0.04 | 13.45 | 0.00 | 2.166 | 10.99 | 0.46 | 5.3 | 94.5 | 0.2 | 2.27 | 1.13 | 0.70 | 0.72 | 1.53 | 3683 | 579 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EDN | 28037 | 2024-03-10 | 2022-09-05 | 3.8 | 3.47 | 3.75 | 3.3 | 0.002 | 0.58 | 0.0 | 0.04 | 11.31 | 0.00 | 2.205 | 6.81 | 0.46 | 5.7 | 94.1 | 0.2 | 2.77 | 0.65 | 0.60 | 0.13 | 3.3 | 0.002 | 0.58 | 0.0 | 0.03 | 13.70 | 0.00 | 2.177 | 7.12 | 3.23 | 3.7 | 96.1 | 0.2 | 2.99 | 1.03 | 0.70 | 0.71 | 2.12 | 3683 | 579 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EDN | 28037 | 2024-04-05 | 2022-09-05 | 3.8 | 3.47 | 3.75 | 3.3 | 0.002 | 0.58 | 0.0 | 0.04 | 11.31 | 0.00 | 2.205 | 6.81 | 0.46 | 5.7 | 94.1 | 0.2 | 2.77 | 0.65 | 0.60 | 0.13 | 3.3 | 0.002 | 0.58 | 0.0 | 0.03 | 13.70 | 0.00 | 2.177 | 7.12 | 3.23 | 3.7 | 96.1 | 0.2 | 2.99 | 1.03 | 0.70 | 0.71 | 2.12 | 3683 | 579 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SC1 | 40334 | 2024-04-05 | 2023-04-04 | 2.92 | 3.14 | 2.89 | 3.2 | 0.003 | 0.68 | 0.0 | 0.04 | 10.47 | 0.01 | 2.266 | 1.15 | 0.00 | 2.5 | 97.5 | 0.0 | -0.78 | 0.58 | 0.81 | 2.42 | 3.2 | 0.003 | 0.61 | 0.0 | 0.04 | 13.73 | 0.00 | 2.195 | 2.73 | 1.89 | 1.4 | 98.6 | 0.0 | 1.94 | 1.99 | 0.61 | 0.83 | 1.25 | 3447 | 446 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SC1 | 40334 | 2023-12-07 | 2023-04-04 | 2.92 | 3.14 | 2.89 | 3.2 | 0.003 | 0.68 | 0.0 | 0.04 | 10.47 | 0.01 | 2.266 | 1.15 | 0.00 | 2.5 | 97.5 | 0.0 | -0.78 | 0.58 | 0.81 | 2.42 | 3.1 | 0.004 | 0.64 | 0.0 | 0.04 | 13.96 | 0.00 | 2.200 | 2.88 | 1.35 | 1.6 | 98.4 | 0.0 | 1.68 | 1.99 | 0.57 | 0.81 | 1.25 | 3447 | 446 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8P51 | 17436 | 2023-12-09 | 2023-05-23 | 3.55 | 4.39 | 3.63 | 4.0 | 0.006 | 0.83 | 0.0 | 0.05 | 13.50 | 0.01 | 2.113 | 4.21 | 0.00 | 4.4 | 95.6 | 0.0 | -1.93 | 0.82 | 0.71 | 2.07 | 4.0 | 0.004 | 0.71 | 0.0 | 0.04 | 14.89 | 0.00 | 2.175 | 8.83 | 0.08 | 3.6 | 96.4 | 0.1 | 1.12 | 1.71 | 0.88 | 0.85 | 1.67 | 12389 | 1574 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8B9L | 15935 | 2023-12-10 | 2022-10-06 | 3.45 | 4.42 | 3.50 | 3.9 | 0.004 | 0.78 | 1.0 | 0.05 | 17.52 | 0.02 | 2.155 | 14.92 | 1.18 | 8.4 | 90.8 | 0.8 | -0.21 | 0.77 | 0.59 | 0.69 | 4.0 | 0.004 | 0.92 | 0.0 | 0.05 | 17.36 | 0.01 | 2.121 | 20.03 | 1.18 | 9.5 | 89.8 | 0.7 | -0.59 | 1.83 | 0.86 | 0.78 | 0.82 | 6826 | 862 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TiF | 41286 | 2024-02-13 | 2023-07-19 | 3.89 | 3.95 | 3.71 | 4.1 | 0.005 | 0.55 | 0.0 | 0.04 | 17.04 | 0.00 | 2.317 | 8.78 | 1.02 | 1.6 | 98.4 | 0.0 | 0.15 | 0.23 | 0.85 | 1.30 | 4.1 | 0.002 | 0.42 | 0.0 | 0.04 | 16.97 | 0.00 | 2.337 | 4.94 | 2.04 | 1.6 | 98.4 | 0.0 | 0.98 | 0.36 | 0.22 | 0.85 | 3.19 | 889 | 131 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TiF | 41286 | 2024-03-10 | 2023-07-19 | 3.89 | 3.95 | 3.71 | 4.1 | 0.005 | 0.55 | 0.0 | 0.04 | 17.04 | 0.00 | 2.317 | 8.78 | 1.02 | 1.6 | 98.4 | 0.0 | 0.15 | 0.23 | 0.85 | 1.30 | 4.1 | 0.002 | 0.42 | 0.0 | 0.04 | 16.97 | 0.00 | 2.337 | 4.94 | 2.04 | 1.6 | 98.4 | 0.0 | 0.98 | 0.36 | 0.22 | 0.85 | 3.19 | 889 | 131 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8B9L | 15935 | 2024-03-16 | 2022-10-06 | 3.45 | 4.42 | 3.50 | 3.9 | 0.004 | 0.78 | 1.0 | 0.05 | 17.52 | 0.02 | 2.155 | 14.92 | 1.18 | 8.4 | 90.8 | 0.8 | -0.21 | 0.77 | 0.59 | 0.69 | 3.9 | 0.003 | 0.89 | 0.0 | 0.05 | 17.27 | 0.01 | 2.130 | 18.43 | 4.33 | 8.5 | 90.7 | 0.8 | -0.38 | 1.82 | 0.85 | 0.78 | 0.55 | 6826 | 862 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8B9L | 15935 | 2024-04-08 | 2022-10-06 | 3.45 | 4.42 | 3.50 | 3.9 | 0.004 | 0.78 | 1.0 | 0.05 | 17.52 | 0.02 | 2.155 | 14.92 | 1.18 | 8.4 | 90.8 | 0.8 | -0.21 | 0.77 | 0.59 | 0.69 | 3.9 | 0.003 | 0.89 | 0.0 | 0.05 | 17.27 | 0.01 | 2.130 | 18.43 | 4.33 | 8.5 | 90.7 | 0.8 | -0.38 | 1.82 | 0.85 | 0.78 | 0.55 | 6826 | 862 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8P51 | 17436 | 2024-01-19 | 2023-05-23 | 3.55 | 4.39 | 3.63 | 4.0 | 0.006 | 0.83 | 0.0 | 0.05 | 13.50 | 0.01 | 2.113 | 4.21 | 0.00 | 4.4 | 95.6 | 0.0 | -1.93 | 0.82 | 0.71 | 2.07 | 4.0 | 0.006 | 0.80 | 0.0 | 0.04 | 15.01 | 0.00 | 2.120 | 10.75 | 1.05 | 4.0 | 95.9 | 0.1 | 0.81 | 1.70 | 0.89 | 0.85 | 1.75 | 12389 | 1574 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8P51 | 17436 | 2024-02-15 | 2023-05-23 | 3.55 | 4.39 | 3.63 | 4.0 | 0.006 | 0.83 | 0.0 | 0.05 | 13.50 | 0.01 | 2.113 | 4.21 | 0.00 | 4.4 | 95.6 | 0.0 | -1.93 | 0.82 | 0.71 | 2.07 | 4.0 | 0.006 | 0.80 | 0.0 | 0.04 | 15.01 | 0.00 | 2.120 | 10.75 | 1.05 | 4.0 | 95.9 | 0.1 | 0.81 | 1.70 | 0.89 | 0.85 | 1.75 | 12389 | 1574 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EDL | 28035 | 2024-02-13 | 2022-09-05 | 3.7 | 3.30 | 3.60 | 3.1 | 0.002 | 0.52 | 0.0 | 0.03 | 11.07 | 0.00 | 2.307 | 6.09 | 0.00 | 2.1 | 97.7 | 0.3 | 2.83 | 0.62 | 0.61 | -0.09 | 3.1 | 0.002 | 0.56 | 0.0 | 0.03 | 13.85 | 0.00 | 2.336 | 7.26 | 3.08 | 2.1 | 97.9 | 0.0 | 3.82 | 1.11 | 0.68 | 0.73 | 2.47 | 2470 | 395 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EDL | 28035 | 2024-01-17 | 2022-09-05 | 3.7 | 3.30 | 3.60 | 3.1 | 0.002 | 0.52 | 0.0 | 0.03 | 11.07 | 0.00 | 2.307 | 6.09 | 0.00 | 2.1 | 97.7 | 0.3 | 2.83 | 0.62 | 0.61 | -0.09 | 3.1 | 0.002 | 0.56 | 0.0 | 0.03 | 13.85 | 0.00 | 2.336 | 7.26 | 3.08 | 2.1 | 97.9 | 0.0 | 3.82 | 1.11 | 0.68 | 0.73 | 2.47 | 2470 | 395 | 1 | 0 | 0 | 0 | 0 | logfile |