Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	9EGX	48039	2024-12-30	2024-11-21	2.9	4.30	—	3.1	0.004	0.69	0.0	0.04	15.38	0.01	2.018	8.54	0.50	4.6	95.3	0.1	-1.07	0.77	0.57	1.20	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	65003	8183	39	328	10	0	0	logfile
✔	9EGY	48040	2024-12-31	2024-11-21	2.9	4.25	—	3.1	0.003	0.55	0.0	0.04	14.41	0.00	2.001	4.78	1.01	6.8	93.1	0.1	-1.24	0.77	0.56	1.31	2.3	0.004	0.69	0.0	0.04	17.63	0.00	1.983	9.76	1.21	5.2	94.8	0.0	-0.31	0.89	0.84	0.76	1.25	66649	8389	41	330	10	0	0	logfile
✔	9EF0	40857	2024-12-27	2024-11-19	3.33	3.49	3.34	3.5	0.002	0.54	0.0	0.04	16.80	0.00	2.198	10.63	0.96	3.6	96.4	0.0	-0.60	0.70	0.79	1.99	3.5	0.004	1.15	1.0	0.04	17.90	0.00	2.377	13.29	2.68	3.6	96.4	0.0	-0.37	0.82	0.69	0.79	2.09	4993	613	2	0	2	0	0	logfile
✔	9ECo	47923	2024-12-27	2024-11-14	2.83	3.57	3.02	3.2	0.005	1.42	0.0	0.04	14.32	0.00	1.871	5.38	1.55	3.0	96.9	0.1	2.04	0.81	0.81	2.60	3.2	0.004	1.00	0.0	0.04	15.21	0.00	0.762	3.40	1.47	4.1	95.8	0.1	1.86	0.90	0.82	0.82	2.19	46691	2954	15	13	15	0	23184	logfile
✔	9HBB	52014	2024-12-28	2024-11-06	3.0	3.19	2.93	3.2	0.011	1.88	0.0	0.09	10.83	0.01	2.495	0.28	0.00	7.2	92.8	0.0	-1.24	0.42	0.82	6.08	3.2	0.003	0.54	0.0	0.05	15.94	0.00	2.472	1.41	2.02	3.4	96.6	0.0	-1.54	1.41	0.44	0.85	5.10	7074	456	6	0	0	0	3606	logfile
✔	9E8K	47723	2024-12-30	2024-11-05	4.08	4.57	5.08	4.1	0.013	1.97	64.0	0.11	16.42	0.02	0.845	7.46	5.57	9.5	88.0	2.5	-3.31	0.72	0.62	—	4.1	0.004	0.85	0.0	0.05	14.73	0.01	1.787	19.24	0.01	8.1	91.5	0.4	-1.20	2.29	0.78	0.77	—	62343	7893	34	0	16	0	0	logfile
✔	9H5J	51886	2024-12-27	2024-10-22	2.72	2.79	2.74	2.9	0.012	1.96	0.0	0.08	11.32	0.02	2.556	0.00	0.00	6.2	92.1	1.7	-2.25	0.43	0.87	6.55	2.8	0.006	0.89	0.0	0.05	17.47	0.01	2.571	4.17	4.23	7.9	92.1	0.0	-2.97	2.38	0.46	0.91	5.61	3300	432	6	0	0	0	0	logfile
✔	9H5G	51884	2024-12-27	2024-10-22	2.48	2.59	2.48	2.6	0.012	1.99	0.0	0.09	10.88	0.01	2.550	0.00	0.00	6.0	94.0	0.0	-1.90	0.44	0.85	6.35	2.6	0.008	1.06	0.0	0.06	17.14	0.00	2.586	4.02	4.50	7.6	92.4	0.0	-2.94	0.66	0.46	0.89	3.87	3300	432	6	0	0	0	0	logfile
✔	9K1D	61972	2024-12-27	2024-10-16	3.34	3.51	3.17	3.5	0.020	0.72	0.0	0.07	16.97	0.00	2.183	12.57	0.27	2.5	97.5	0.0	0.87	0.69	0.81	0.92	3.5	0.003	0.67	0.0	0.04	16.78	0.00	2.447	7.57	4.37	3.1	96.9	0.0	0.53	0.42	0.71	0.85	1.61	6892	858	5	0	6	0	0	logfile
✔	9DZE	47327	2024-12-26	2024-10-16	4.3	4.45	4.32	5.7	0.008	1.27	1.0	0.05	5.49	0.01	2.654	0.00	0.00	0.6	99.4	0.0	0.34	0.76	0.66	—	5.5	0.005	0.58	0.0	0.03	4.34	0.00	2.555	0.60	0.00	4.5	95.5	0.0	-0.08	0.72	0.87	0.87	—	44930	9060	30	0	0	0	0	logfile
✔	9K1C	61971	2024-12-27	2024-10-16	3.2	3.44	3.16	3.5	0.002	0.92	0.0	0.04	13.74	0.00	2.213	5.89	0.00	2.2	97.8	0.0	2.36	0.64	0.76	2.57	3.5	0.003	0.61	0.0	0.04	15.37	0.00	2.467	6.65	2.95	2.7	97.3	0.0	1.39	0.42	0.60	0.79	2.59	6611	871	5	0	1	0	0	logfile
✔	9DXS	47297	2024-12-31	2024-10-11	3.55	4.09	3.67	4.0	0.011	1.47	0.0	0.19	20.28	0.01	2.217	4.35	0.39	11.0	88.4	0.6	-5.80	0.60	0.82	3.26	4.0	0.003	0.96	0.0	0.07	18.40	0.00	2.188	10.53	4.07	10.5	89.4	0.1	-0.57	3.16	0.62	0.85	1.98	15294	1784	14	0	43	0	0	logfile
✔	9DXA	47283	2024-12-31	2024-10-11	3.4	3.75	3.47	3.7	0.009	0.80	0.0	0.04	15.02	0.00	2.281	4.71	0.23	2.4	97.6	0.0	1.98	0.63	0.79	1.86	3.7	0.003	0.56	0.0	0.04	15.45	0.00	2.390	8.30	3.42	2.5	97.5	0.0	2.24	1.31	0.62	0.80	1.16	16291	1880	12	0	18	0	0	logfile
✔	9DX7	47282	2024-12-31	2024-10-10	3.3	3.69	3.41	3.7	0.010	0.79	0.0	0.04	12.83	0.00	2.254	4.50	0.17	2.0	98.0	0.0	1.85	0.63	0.81	2.53	3.7	0.002	0.53	0.0	0.04	15.19	0.00	2.449	7.81	2.69	2.3	97.7	0.0	2.41	1.64	0.60	0.79	1.77	16238	1873	12	0	18	0	0	logfile
✔	9H1P	51769	2024-12-29	2024-10-10	3.1	3.40	3.10	3.4	0.004	0.67	0.0	0.04	13.91	0.01	2.482	1.72	0.00	0.0	100.0	0.0	-1.00	0.50	0.78	4.07	3.4	0.005	0.87	0.0	0.04	14.91	0.00	2.309	2.33	1.22	0.2	99.8	0.0	1.40	0.43	0.44	0.75	2.96	10668	1332	24	0	0	0	0	logfile
✘	9DW9	47239	2024-12-30	2024-10-08	2.8	3.05	2.88	3.1	0.004	0.67	1.0	0.04	15.32	0.00	1.931	2.37	1.69	2.2	97.8	0.0	0.50	0.68	0.87	3.80	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12332	1511	5	0	19	3	0	logfile
✔	9DW5	47236	2024-12-29	2024-10-08	3.8	4.25	3.99	4.1	0.005	0.76	0.0	0.04	14.41	0.00	2.012	6.90	2.49	2.8	97.2	0.1	0.83	0.63	0.78	1.61	4.1	0.007	0.79	0.0	0.05	15.26	0.00	1.847	9.15	6.14	5.4	94.6	0.0	0.32	0.75	0.63	0.79	1.45	9748	1464	3	0	3	0	0	logfile
✔	9JUB	61826	2024-11-14	2024-10-07	3.1	3.29	3.10	3.4	0.007	0.79	1.0	0.06	11.95	0.01	1.934	17.05	0.56	7.6	92.3	0.1	-1.75	0.55	0.67	3.19	3.3	0.003	0.59	0.0	0.04	13.69	0.00	2.585	6.15	1.67	5.0	95.0	0.0	-0.74	0.59	0.63	0.74	2.65	6479	829	5	0	5	0	0	logfile
✔	9JUB	61826	2024-12-27	2024-10-07	3.1	3.29	3.10	3.4	0.007	0.79	1.0	0.06	11.95	0.01	1.934	17.05	0.56	7.6	92.3	0.1	-1.75	0.55	0.67	3.19	3.3	0.003	0.59	0.0	0.04	13.69	0.00	2.585	6.15	1.67	5.0	95.0	0.0	-0.74	0.59	0.63	0.74	2.65	6479	829	5	0	5	0	0	logfile
✔	9DVA	47194	2024-11-19	2024-10-07	3.1	3.30	3.09	3.3	0.003	0.51	0.0	0.04	14.23	0.00	2.077	4.00	0.00	1.2	98.8	0.0	0.25	0.62	0.81	3.20	3.3	0.002	0.57	0.0	0.04	15.80	0.00	2.189	4.36	0.75	1.9	98.1	0.0	0.76	1.09	0.70	0.86	2.37	18529	2354	13	0	10	0	0	logfile

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