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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7XJH | 33227 | 2022-05-12 | 2022-04-18 | 3.3 | 2.96 | 3.18 | 3.2 | 0.003 | 0.58 | 0.0 | 0.04 | 14.01 | 0.00 | 2.218 | 7.48 | 0.00 | 3.1 | 96.9 | 0.0 | 0.45 | 0.60 | 0.78 | 2.05 | 3.2 | 0.007 | 0.66 | 0.0 | 0.04 | 15.48 | 0.00 | 2.095 | 7.35 | 0.49 | 2.8 | 97.2 | 0.0 | 0.86 | 0.38 | 0.66 | 0.81 | 2.18 | 7832 | 1027 | 5 | 0 | 1 | 0 | 0 | logfile |
✘ | 7XJi | 33228 | 2022-05-12 | 2022-04-18 | 3.9 | 3.60 | 3.70 | 3.9 | 0.004 | 0.61 | 0.0 | 0.04 | 14.07 | 0.00 | 2.165 | 9.09 | 0.00 | 4.3 | 95.7 | 0.0 | -0.25 | 0.61 | 0.78 | 2.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7851 | 1027 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7UPi | 26667 | 2022-05-12 | 2022-04-15 | 2.89 | 3.71 | 2.90 | 3.2 | 0.002 | 0.55 | 0.0 | 0.04 | 9.09 | 0.00 | 1.843 | 2.62 | 0.00 | 1.9 | 98.1 | 0.0 | -0.12 | 0.91 | 0.87 | 3.97 | 3.2 | 0.004 | 0.58 | 0.0 | 0.04 | 11.05 | 0.00 | 1.939 | 4.35 | 0.11 | 2.6 | 97.4 | 0.0 | -0.29 | 2.21 | 0.91 | 0.90 | 4.11 | 7775 | 972 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 7UML | 26603 | 2022-05-13 | 2022-04-07 | 3.5 | 3.77 | 3.85 | 3.7 | 0.003 | 0.58 | 0.0 | 0.04 | 15.49 | 0.00 | 2.114 | 7.79 | 0.00 | 2.0 | 97.4 | 0.6 | -2.75 | 0.66 | 0.69 | 2.52 | 3.7 | 0.009 | 1.12 | 0.0 | 0.04 | 17.55 | 0.01 | 1.978 | 11.79 | 0.58 | 10.4 | 89.1 | 0.5 | -1.95 | 0.78 | 0.65 | 0.72 | 2.42 | 13227 | 812 | 7 | 13 | 0 | 0 | 6477 | logfile |
✔ | 7XD1 | 33132 | 2022-05-13 | 2022-03-26 | 3.2 | 2.74 | 3.19 | 3.1 | 0.009 | 0.87 | 0.0 | 0.05 | 26.97 | 0.01 | 2.339 | 2.86 | 1.59 | 1.3 | 98.7 | 0.0 | -5.83 | 0.76 | 0.83 | 4.00 | 3.1 | 0.004 | 0.61 | 0.0 | 0.04 | 28.48 | 0.00 | 2.032 | 6.87 | 0.48 | 2.3 | 97.7 | 0.0 | 1.55 | 0.48 | 0.78 | 0.84 | 2.74 | 12048 | 760 | 10 | 294 | 0 | 0 | 0 | logfile |
✔ | 7XD0 | 33131 | 2022-05-14 | 2022-03-26 | 3.48 | 2.99 | — | 2.9 | 0.003 | 0.57 | 0.0 | 0.04 | 27.19 | 0.00 | 2.132 | 10.17 | 0.13 | 2.9 | 97.1 | 0.0 | 1.23 | 0.82 | 0.81 | 1.82 | 2.9 | 0.006 | 0.68 | 0.0 | 0.04 | 28.43 | 0.00 | 2.154 | 11.37 | 0.65 | 4.5 | 95.5 | 0.0 | 1.36 | 0.30 | 0.83 | 0.83 | 1.44 | 13222 | 915 | 12 | 292 | 0 | 0 | 0 | logfile |
✘ | 7XCT | 33127 | 2022-05-15 | 2022-03-25 | 2.72 | 3.02 | — | 3.0 | 0.012 | 1.10 | 0.0 | 0.06 | 22.70 | 0.01 | 2.220 | 3.90 | 0.59 | 5.3 | 94.3 | 0.4 | -5.11 | 0.73 | 0.82 | 3.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18633 | 1575 | 16 | 290 | 2 | 0 | 0 | logfile |
✔ | 7XCR | 33126 | 2022-05-14 | 2022-03-25 | 2.57 | 2.86 | — | 2.8 | 0.007 | 0.96 | 0.0 | 0.05 | 23.88 | 0.01 | 2.228 | 4.19 | 0.90 | 4.3 | 95.6 | 0.2 | -4.82 | 0.76 | 0.83 | 4.14 | 2.8 | 0.005 | 0.69 | 0.0 | 0.04 | 26.33 | 0.00 | 2.108 | 8.73 | 2.50 | 3.9 | 95.9 | 0.2 | 0.80 | 0.50 | 0.74 | 0.83 | 3.42 | 15400 | 1174 | 13 | 292 | 1 | 0 | 0 | logfile |
✔ | 7XC6 | 33113 | 2022-05-14 | 2022-03-23 | 2.79 | 2.93 | 2.78 | 3.0 | 0.006 | 0.72 | 0.0 | 0.05 | 17.67 | 0.00 | 2.003 | 7.23 | 7.75 | 7.1 | 92.9 | 0.0 | -2.40 | 0.63 | 0.67 | 0.82 | 2.9 | 0.005 | 0.79 | 0.0 | 0.04 | 18.24 | 0.00 | 2.092 | 8.32 | 2.05 | 6.4 | 93.6 | 0.0 | -0.08 | 0.81 | 0.75 | 0.91 | 3.41 | 16176 | 2026 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UDB | 26455 | 2022-05-13 | 2022-03-18 | 3.5 | 3.64 | 3.39 | 3.6 | 0.003 | 0.50 | 0.0 | 0.04 | 15.55 | 0.00 | 2.182 | 6.46 | 0.14 | 2.8 | 97.2 | 0.0 | 1.74 | 0.77 | 0.82 | 1.51 | 3.6 | 0.003 | 0.54 | 0.0 | 0.04 | 16.78 | 0.00 | 2.237 | 7.08 | 0.00 | 2.8 | 97.2 | 0.0 | 1.99 | 0.35 | 0.78 | 0.84 | 1.52 | 6472 | 807 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UDC | 26456 | 2022-05-13 | 2022-03-18 | 3.7 | 3.83 | 3.54 | 3.8 | 0.003 | 0.54 | 0.0 | 0.04 | 14.90 | 0.00 | 2.200 | 7.93 | 0.28 | 3.3 | 96.7 | 0.0 | 1.79 | 0.71 | 0.80 | 1.93 | 3.8 | 0.003 | 0.54 | 0.0 | 0.04 | 16.94 | 0.00 | 2.094 | 7.16 | 0.14 | 3.4 | 96.6 | 0.0 | 2.22 | 0.36 | 0.74 | 0.82 | 1.66 | 6425 | 806 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UB5 | 26435 | 2022-05-15 | 2022-03-14 | 3.35 | 3.64 | 3.34 | 3.5 | 0.003 | 0.63 | 0.0 | 0.05 | 13.14 | 0.01 | 2.287 | 3.70 | 0.00 | 3.5 | 96.5 | 0.0 | -0.85 | 0.85 | 0.87 | 3.11 | 3.4 | 0.007 | 0.61 | 0.0 | 0.05 | 14.15 | 0.00 | 2.176 | 5.93 | 0.04 | 4.2 | 95.8 | 0.0 | -0.22 | 0.31 | 0.86 | 0.88 | 2.97 | 24923 | 3104 | 16 | 0 | 47 | 0 | 0 | logfile |
✔ | 7UB6 | 26436 | 2022-05-15 | 2022-03-14 | 3.52 | 3.83 | 3.48 | 3.6 | 0.004 | 0.64 | 0.0 | 0.05 | 13.00 | 0.01 | 2.229 | 3.41 | 0.04 | 2.6 | 97.4 | 0.0 | -0.83 | 0.85 | 0.85 | 2.91 | 3.6 | 0.006 | 0.58 | 0.0 | 0.04 | 13.93 | 0.00 | 2.104 | 5.60 | 0.04 | 4.1 | 95.9 | 0.0 | 0.06 | 0.26 | 0.85 | 0.87 | 3.02 | 24762 | 3105 | 10 | 0 | 36 | 0 | 0 | logfile |
✔ | 7UB0 | 26433 | 2022-05-15 | 2022-03-14 | 3.31 | 3.57 | 3.27 | 3.4 | 0.003 | 0.47 | 0.0 | 0.04 | 13.05 | 0.00 | 2.205 | 5.06 | 0.04 | 2.0 | 98.0 | 0.0 | -0.12 | 0.85 | 0.86 | 3.45 | 3.4 | 0.004 | 0.49 | 0.0 | 0.04 | 13.94 | 0.00 | 2.159 | 5.24 | 0.15 | 2.5 | 97.5 | 0.0 | 0.29 | 0.23 | 0.86 | 0.88 | 3.33 | 24993 | 3109 | 16 | 0 | 50 | 0 | 0 | logfile |
✔ | 7UAQ | 26430 | 2022-05-12 | 2022-03-13 | 3.1 | 3.91 | 2.90 | 3.7 | 0.006 | 1.16 | 2.0 | 0.07 | 12.64 | 0.01 | 2.101 | 25.20 | 0.22 | 11.5 | 88.5 | 0.0 | -2.56 | 0.57 | 0.74 | 2.32 | 3.7 | 0.005 | 0.84 | 0.0 | 0.05 | 14.98 | 0.00 | 2.126 | 20.16 | 1.08 | 10.3 | 89.7 | 0.0 | -2.17 | 1.27 | 0.58 | 0.79 | 2.01 | 4362 | 533 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 7UAP | 26429 | 2022-05-16 | 2022-03-13 | 2.8 | 2.98 | 2.85 | 3.0 | 0.007 | 1.25 | 12.0 | 0.07 | 13.61 | 0.01 | 2.041 | 19.94 | 0.29 | 7.1 | 92.4 | 0.6 | -2.28 | 0.64 | 0.65 | 1.45 | 3.0 | 0.006 | 0.95 | 1.0 | 0.06 | 16.13 | 0.01 | 1.872 | 16.88 | 2.63 | 7.3 | 92.5 | 0.3 | -1.65 | 1.90 | 0.67 | 0.77 | 2.02 | 31657 | 3957 | 27 | 0 | 59 | 0 | 0 | logfile |
✔ | 7Z6H | 14527 | 2022-05-14 | 2022-03-11 | 3.59 | 2.39 | 3.80 | 2.2 | 0.003 | 0.62 | 0.0 | 0.04 | 19.70 | 0.01 | 2.045 | 8.12 | 0.68 | 6.4 | 93.4 | 0.2 | -0.27 | 0.74 | 0.70 | 1.41 | 2.2 | 0.004 | 0.63 | 0.0 | 0.04 | 19.76 | 0.01 | 2.047 | 8.41 | 0.59 | 7.2 | 92.6 | 0.2 | -0.23 | 0.91 | 0.75 | 0.71 | 1.45 | 20629 | 2513 | 15 | 32 | 5 | 0 | 0 | logfile |
✔ | 7X7N | 33042 | 2022-05-15 | 2022-03-10 | 4.47 | 4.03 | 4.49 | 4.2 | 0.013 | 1.04 | 6.0 | 0.06 | 14.74 | 0.01 | 1.956 | 29.19 | 0.52 | 19.6 | 80.3 | 0.1 | -5.63 | 0.73 | 0.77 | — | 4.1 | 0.003 | 0.75 | 6.0 | 0.05 | 14.25 | 0.00 | 2.058 | 13.88 | 0.00 | 9.5 | 90.5 | 0.0 | -2.57 | 0.77 | 0.72 | 0.76 | — | 26493 | 3314 | 12 | 0 | 45 | 0 | 0 | logfile |
✔ | 7X6L | 33023 | 2022-05-14 | 2022-03-07 | 3.7 | 2.76 | — | 2.2 | 0.002 | 0.45 | 0.0 | 0.04 | 7.43 | 0.00 | 2.291 | 4.69 | 2.04 | 1.9 | 97.9 | 0.2 | -3.07 | 0.64 | 0.56 | 0.95 | 2.2 | 0.004 | 0.85 | 0.0 | 0.05 | 13.89 | 0.01 | 2.048 | 19.43 | 0.42 | 4.2 | 95.6 | 0.1 | -1.53 | 1.02 | 0.67 | 0.62 | 1.07 | 21486 | 2781 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7X6o | 33024 | 2022-05-14 | 2022-03-07 | 3.5 | 2.65 | — | 3.8 | 0.002 | 0.48 | 0.0 | 0.04 | 8.09 | 0.00 | 2.283 | 3.29 | 1.82 | 2.0 | 98.0 | 0.0 | -3.07 | 0.60 | 0.53 | 0.73 | 2.1 | 0.008 | 1.03 | 1.0 | 0.05 | 12.91 | 0.01 | 2.072 | 18.35 | 0.50 | 4.8 | 95.2 | 0.0 | -1.04 | 1.58 | 0.64 | 0.59 | 1.03 | 21609 | 2787 | 12 | 0 | 0 | 0 | 0 | logfile |