Table showing results for March 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7M19	23616	2021-03-28	2021-03-12	3.69	3.92	3.50	3.8	0.010	1.03	0.0	0.05	16.06	0.00	2.231	3.80	0.06	3.9	96.1	0.0	-0.78	0.68	0.80	1.98	3.8	0.002	0.57	0.0	0.04	14.42	0.00	2.170	6.70	0.00	4.4	95.6	0.0	0.49	1.23	0.68	0.79	1.84	16039	1878	12	0	19	0	0	logfile
✔	7M17	23614	2021-03-28	2021-03-12	3.65	3.90	3.47	3.8	0.010	1.02	0.0	0.05	16.06	0.00	2.234	3.21	0.00	4.3	95.7	0.0	-1.06	0.68	0.80	1.78	3.8	0.003	0.62	0.0	0.04	14.53	0.00	2.150	8.22	0.06	3.7	96.3	0.0	1.00	0.42	0.68	0.80	1.79	16039	1878	12	0	19	0	0	logfile
✔	7M05	23609	2021-03-29	2021-03-10	2.39	2.66	2.49	2.6	0.013	0.97	0.0	0.06	14.86	0.01	2.064	3.55	0.50	6.9	92.3	0.8	-3.01	0.75	0.81	4.52	2.6	0.003	0.60	0.0	0.05	16.57	0.00	2.112	2.14	1.28	2.8	97.1	0.1	0.49	1.28	0.79	0.83	3.98	57152	3636	12	0	4	0	28188	logfile
✔	7NRX	12552	2021-03-28	2021-03-04	3.55	3.48	3.32	3.7	0.010	1.20	0.0	0.09	12.76	0.01	2.356	6.37	0.00	8.7	91.3	0.0	-3.60	0.47	0.83	4.85	3.6	0.005	0.69	0.0	0.05	14.97	0.00	2.269	9.89	0.00	6.9	93.1	0.0	-3.19	1.51	0.44	0.81	5.11	5870	770	10	0	0	0	0	logfile
✔	7NRV	12551	2021-03-28	2021-03-04	3.0	3.20	2.72	3.2	0.007	1.15	0.0	0.07	12.81	0.03	2.385	3.52	0.00	6.0	94.0	0.0	-3.05	0.48	0.83	3.35	3.2	0.010	0.88	0.0	0.06	12.82	0.00	2.208	10.14	0.00	8.4	91.6	0.0	-2.77	0.51	0.42	0.83	4.19	5870	770	10	0	0	0	0	logfile
✔	7LVV	23543	2021-03-29	2021-02-26	3.25	4.06	—	3.8	0.013	1.81	32.0	0.12	23.70	0.01	1.705	19.68	13.97	10.3	88.4	1.3	-4.96	0.83	0.74	1.48	3.7	0.003	0.62	0.0	0.04	19.48	0.00	2.129	9.37	0.00	3.5	96.4	0.0	-0.55	1.07	0.85	0.81	2.23	21020	2312	12	110	6	0	0	logfile
✔	7E7B	30998	2021-03-29	2021-02-25	2.6	2.79	—	2.7	0.010	0.93	3.0	0.06	15.45	0.02	2.198	4.88	5.49	3.6	96.4	0.0	-2.02	0.83	0.87	4.58	2.7	0.004	0.56	0.0	0.04	13.49	0.00	2.195	4.40	0.00	2.7	97.3	0.0	-0.19	0.46	0.83	0.87	4.43	27363	3306	48	0	99	36	0	logfile
✔	7E7D	30999	2021-03-29	2021-02-25	3.2	3.39	—	3.3	0.009	0.99	1.0	0.09	14.42	0.01	2.140	6.65	3.69	2.8	97.2	0.0	-1.75	0.82	0.84	3.05	3.3	0.004	0.60	0.0	0.05	13.41	0.00	2.170	6.62	0.00	3.9	96.1	0.0	-0.17	1.70	0.82	0.84	2.94	26509	3240	38	0	86	0	0	logfile
✔	7LUM	23522	2021-03-29	2021-02-22	4.5	4.68	—	4.6	0.007	0.85	0.0	0.05	14.02	0.00	1.970	25.71	0.00	7.5	92.3	0.2	-0.70	0.79	0.75	—	4.6	0.003	0.79	0.0	0.05	14.10	0.00	1.908	18.93	0.03	5.2	94.7	0.1	0.12	2.51	0.80	0.79	—	63978	8374	16	0	0	0	0	logfile
✔	7LUA	23519	2021-03-29	2021-02-21	4.7	5.59	4.78	4.1	0.014	1.94	9.0	0.11	14.60	0.02	2.541	0.82	2.85	9.1	89.8	1.1	-2.53	0.78	0.67	—	3.8	0.005	0.72	0.0	0.04	12.89	0.00	1.855	22.06	0.17	13.0	86.9	0.1	-2.57	0.74	0.87	0.82	—	42495	2650	56	0	139	0	20105	logfile
✔	7LSS	23507	2021-03-29	2021-02-18	3.72	4.30	3.76	4.0	0.011	1.09	2.0	0.06	12.11	0.01	1.993	1.10	0.00	4.9	95.1	0.0	-0.63	0.76	0.78	3.19	4.0	0.004	0.63	0.0	0.04	12.30	0.00	2.084	7.22	0.00	4.2	95.8	0.0	0.68	1.58	0.78	0.83	2.62	20582	2783	14	0	42	0	0	logfile
✔	7LS9	23506	2021-03-29	2021-02-17	3.42	3.90	3.53	3.8	0.005	0.86	9.0	0.05	12.39	0.01	2.232	4.32	0.00	3.0	97.0	0.0	-0.75	0.81	0.75	2.14	3.8	0.003	0.58	0.0	0.04	12.72	0.00	2.134	8.29	0.00	2.8	97.2	0.0	0.05	1.20	0.84	0.80	2.40	32226	4002	33	0	75	0	0	logfile
✔	7LQV	23489	2021-03-29	2021-02-15	3.25	3.89	3.38	3.6	0.003	0.54	0.0	0.04	13.54	0.00	2.020	4.68	0.06	5.4	94.6	0.0	-0.41	0.78	0.77	1.95	3.7	0.005	0.62	0.0	0.04	13.81	0.00	2.086	9.90	0.03	7.0	93.0	0.0	-0.61	0.54	0.79	0.80	1.89	31274	3980	12	0	28	0	0	logfile
✔	7LQW	23490	2021-03-29	2021-02-15	4.47	7.28	4.94	4.6	0.002	0.77	1.0	0.05	13.42	0.00	0.911	5.63	0.12	4.6	95.4	0.1	-1.27	0.78	0.64	—	4.7	0.003	0.67	0.0	0.04	13.02	0.00	2.151	18.23	0.04	6.9	93.0	0.1	-1.38	1.13	0.88	0.80	—	25332	3374	8	0	26	0	0	logfile
✔	7Lo5	23461	2021-03-29	2021-02-09	2.86	3.45	—	3.2	0.011	1.62	17.0	0.11	24.27	0.01	1.819	12.22	12.88	6.5	93.4	0.1	-3.88	0.80	0.79	2.59	3.2	0.003	0.57	0.0	0.04	19.19	0.00	2.123	8.84	0.00	3.3	96.7	0.0	0.25	0.83	0.82	0.85	3.14	37449	4055	16	215	8	0	0	logfile
✔	7NG4	12307	2021-03-28	2021-02-08	4.4	5.07	4.36	3.8	0.008	1.02	0.0	0.05	13.15	0.01	1.641	23.04	0.12	7.4	92.6	0.0	-2.05	0.89	0.78	—	3.8	0.003	0.58	0.0	0.04	12.72	0.00	1.829	11.93	0.00	5.0	95.0	0.0	-0.76	1.06	0.87	0.77	—	74795	4656	13	0	65	0	37485	logfile
✔	7NG5	12308	2021-03-28	2021-02-08	3.8	4.19	3.88	4.0	0.007	0.87	0.0	0.04	13.34	0.01	1.912	14.28	0.15	7.5	92.5	0.0	-2.16	0.80	0.80	1.61	4.0	0.004	0.55	0.0	0.04	13.19	0.00	1.750	9.03	0.00	5.7	94.3	0.0	-0.46	0.43	0.79	0.80	1.40	74800	4656	13	0	66	0	37485	logfile
✔	7NFY	12306	2021-03-28	2021-02-08	3.9	4.30	3.99	3.9	0.007	0.76	0.0	0.04	12.74	0.01	1.961	15.79	0.00	8.4	91.6	0.0	-2.38	0.85	0.79	1.59	3.9	0.003	0.56	0.0	0.05	12.74	0.00	1.764	9.70	0.00	5.2	94.8	0.0	-0.72	1.15	0.85	0.79	1.54	74800	4656	13	0	66	0	37485	logfile
✔	7LL1	23411	2021-03-29	2021-02-03	3.73	4.32	3.66	3.8	0.013	1.89	13.0	0.13	14.05	0.02	1.939	0.84	1.46	6.8	92.8	0.4	-1.71	0.76	0.68	2.56	3.8	0.005	0.72	0.0	0.05	12.88	0.00	2.124	10.47	0.00	6.2	93.7	0.1	-0.65	1.25	0.86	0.84	2.42	25773	3135	45	0	108	0	0	logfile
✔	7LLA	23413	2021-03-29	2021-02-03	2.97	3.51	—	3.4	0.006	0.95	0.0	0.06	14.62	0.01	2.260	6.00	0.59	4.6	95.4	0.0	-2.37	0.74	0.79	2.24	3.4	0.006	0.67	0.0	0.05	14.05	0.00	2.102	9.38	0.00	4.6	95.4	0.0	-0.62	0.44	0.71	0.81	2.86	31900	4084	8	0	12	0	0	logfile

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