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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7A6A | 11668 | 2021-01-06 | 2020-08-25 | 1.15 | 1.13 | — | 1.2 | 0.018 | 1.70 | 24.0 | 0.16 | 14.70 | 0.01 | 1.857 | 3.78 | 3.03 | 1.2 | 98.8 | 0.0 | 2.45 | 0.47 | 0.61 | 9.02 | 1.2 | 0.003 | 0.70 | 0.0 | 0.04 | 15.40 | 0.00 | 2.095 | 3.40 | 1.82 | 1.8 | 98.2 | 0.0 | 4.60 | 0.44 | 0.67 | 0.78 | 8.90 | 41613 | 4152 | 72 | 0 | 32 | 4621 | 0 | logfile |
✔ | 7A6B | 11669 | 2021-01-06 | 2020-08-25 | 1.33 | 1.21 | — | 1.3 | 0.015 | 1.60 | 24.0 | 0.12 | 15.33 | 0.01 | 1.893 | 4.57 | 4.17 | 1.2 | 98.8 | 0.0 | 2.52 | 0.52 | 0.65 | 9.13 | 1.3 | 0.002 | 0.70 | 0.0 | 0.04 | 14.82 | 0.01 | 2.177 | 3.36 | 1.79 | 1.8 | 98.2 | 0.0 | 4.96 | 0.39 | 0.73 | 0.83 | 9.05 | 41494 | 4152 | 72 | 0 | 32 | 3854 | 0 | logfile |
✔ | 6Z9F | 11122 | 2021-01-06 | 2020-06-03 | 1.56 | 1.61 | 1.61 | 1.6 | 0.015 | 1.75 | 48.0 | 0.10 | 15.49 | 0.01 | 1.782 | 5.46 | 3.66 | 1.7 | 98.3 | 0.0 | 2.70 | 0.68 | 0.69 | 8.63 | 1.6 | 0.003 | 0.67 | 0.0 | 0.04 | 15.04 | 0.01 | 2.117 | 5.13 | 3.05 | 1.8 | 98.2 | 0.0 | 4.59 | 0.98 | 0.83 | 0.83 | 8.49 | 41020 | 4152 | 72 | 0 | 32 | 4172 | 0 | logfile |
✔ | 7C7S | 30301 | 2021-01-05 | 2020-05-26 | 2.9 | 2.38 | — | 1.8 | 0.006 | 0.77 | 0.0 | 0.14 | 13.72 | 0.01 | 2.153 | 7.81 | 0.00 | 3.7 | 96.3 | 0.0 | -2.62 | 0.83 | 0.80 | 2.82 | 1.8 | 0.003 | 0.62 | 0.0 | 0.04 | 12.92 | 0.00 | 2.168 | 8.13 | 0.00 | 3.8 | 96.2 | 0.0 | -0.16 | 0.61 | 0.83 | 0.79 | 2.49 | 10915 | 1355 | 4 | 0 | 9 | 0 | 0 | logfile |
✔ | 6S61 | 10101 | 2021-01-05 | 2019-07-02 | 1.84 | 1.89 | 1.85 | 1.9 | 0.011 | 1.36 | 0.0 | 0.06 | 12.21 | 0.01 | 0.312 | 2.30 | 1.29 | 1.8 | 98.2 | 0.0 | 3.69 | 0.77 | 0.86 | 8.46 | 1.9 | 0.004 | 0.63 | 0.0 | 0.04 | 14.74 | 0.00 | 1.787 | 4.44 | 0.65 | 1.2 | 98.8 | 0.0 | 4.14 | 0.68 | 0.78 | 0.86 | 8.81 | 71060 | 4128 | 72 | 0 | 30 | 3854 | 32904 | logfile |
✔ | 6TAX | 10429 | 2021-01-07 | 2019-10-31 | 3.2 | 2.63 | — | 1.9 | 0.009 | 1.13 | 0.0 | 0.06 | 11.18 | 0.01 | 2.065 | 5.47 | 0.46 | 9.5 | 90.3 | 0.2 | -4.10 | 0.88 | 0.80 | 3.18 | 1.9 | 0.003 | 0.65 | 0.0 | 0.04 | 12.47 | 0.00 | 2.052 | 9.66 | 0.00 | 7.7 | 92.3 | 0.0 | -0.14 | 1.61 | 0.85 | 0.74 | 2.11 | 35235 | 4349 | 1 | 0 | 71 | 0 | 0 | logfile |
✔ | 6YL3 | 10835 | 2021-01-13 | 2020-04-06 | 1.98 | 2.04 | 1.99 | 2.0 | 0.067 | 3.60 | 246.0 | 0.36 | 16.35 | 0.02 | 1.877 | 4.38 | 2.74 | 5.3 | 94.4 | 0.4 | -2.46 | 0.78 | 0.83 | 6.40 | 2.0 | 0.003 | 0.70 | 0.0 | 0.05 | 16.21 | 0.00 | 1.815 | 4.94 | 1.46 | 3.6 | 96.3 | 0.1 | 0.12 | 0.82 | 0.79 | 0.83 | 6.95 | 150156 | 9552 | 84 | 0 | 24 | 3672 | 73044 | logfile |
✔ | 6UVN | 20908 | 2021-01-06 | 2019-11-03 | 3.1 | 2.62 | — | 2.0 | 0.010 | 0.84 | 1.0 | 0.05 | 14.35 | 0.00 | 2.114 | 18.82 | 0.52 | 8.1 | 91.8 | 0.1 | -3.87 | 0.89 | 0.81 | 2.57 | 2.0 | 0.003 | 0.60 | 0.0 | 0.04 | 13.99 | 0.00 | 1.802 | 12.90 | 0.00 | 5.0 | 95.0 | 0.0 | -0.89 | 1.18 | 0.89 | 0.79 | 2.55 | 29487 | 3461 | 14 | 61 | 83 | 0 | 0 | logfile |
✔ | 5FTK | 3296 | 2021-01-07 | 2016-01-14 | 2.4 | 2.04 | — | 2.0 | 0.011 | 1.39 | 0.0 | 0.07 | 12.31 | 0.01 | 2.216 | 24.37 | 0.65 | 6.1 | 93.5 | 0.4 | -4.37 | 0.44 | 0.66 | 3.22 | 2.0 | 0.004 | 0.86 | 0.0 | 0.05 | 18.01 | 0.01 | 2.106 | 17.31 | 4.12 | 8.7 | 91.3 | 0.0 | -1.97 | 1.08 | 0.47 | 0.65 | 1.69 | 34374 | 4338 | 18 | 0 | 12 | 96 | 0 | logfile |
✔ | 5FTJ | 3295 | 2021-01-07 | 2016-01-14 | 2.3 | 2.04 | — | 2.0 | 0.010 | 1.31 | 0.0 | 0.18 | 14.93 | 0.01 | 1.862 | 40.24 | 0.81 | 5.7 | 93.3 | 1.0 | -3.32 | 0.42 | 0.64 | 2.67 | 2.0 | 0.004 | 0.83 | 0.0 | 0.05 | 18.09 | 0.01 | 2.100 | 14.79 | 2.47 | 6.5 | 93.3 | 0.1 | -0.51 | 1.25 | 0.46 | 0.64 | 1.47 | 34602 | 4338 | 18 | 0 | 18 | 120 | 0 | logfile |
✔ | 6M2W | 30067 | 2021-01-07 | 2020-03-01 | 3.8 | 2.59 | 3.89 | 2.6 | 0.006 | 1.08 | 0.0 | 0.05 | 15.60 | 0.01 | 2.276 | 3.98 | 3.59 | 3.1 | 96.9 | 0.0 | -5.38 | 0.77 | 0.64 | 0.21 | 2.1 | 0.003 | 0.62 | 0.0 | 0.04 | 13.34 | 0.00 | 2.138 | 8.06 | 0.00 | 2.6 | 97.4 | 0.0 | 0.26 | 1.86 | 0.83 | 0.79 | 2.33 | 120452 | 14972 | 16 | 0 | 1828 | 0 | 0 | logfile |
✔ | 7JJP | 22358 | 2021-01-07 | 2020-07-27 | 1.94 | 2.15 | 2.08 | 2.1 | 0.011 | 1.21 | 0.0 | 0.07 | 14.56 | 0.01 | 2.228 | 2.51 | 0.56 | 1.6 | 98.4 | 0.0 | 0.39 | 0.71 | 0.85 | 5.30 | 2.1 | 0.002 | 0.54 | 0.0 | 0.04 | 14.88 | 0.00 | 2.112 | 7.70 | 0.65 | 1.0 | 99.0 | 0.0 | 3.81 | 0.93 | 0.72 | 0.85 | 4.88 | 40920 | 2352 | 36 | 0 | 180 | 396 | 19104 | logfile |
✔ | 6XEY | 22156 | 2021-01-06 | 2020-06-14 | 3.25 | 3.61 | 2.92 | 2.1 | 0.005 | 0.81 | 1.0 | 0.05 | 12.58 | 0.01 | 2.265 | 3.59 | 0.26 | 5.1 | 94.8 | 0.1 | -1.87 | 0.88 | 0.83 | 3.34 | 2.1 | 0.003 | 0.55 | 0.0 | 0.04 | 12.56 | 0.00 | 2.143 | 6.78 | 0.00 | 4.8 | 95.2 | 0.1 | -0.36 | 0.32 | 0.88 | 0.83 | 2.69 | 28482 | 3788 | 24 | 0 | 63 | 0 | 0 | logfile |
✔ | 3KTT | 5148 | 2021-01-05 | 2009-11-25 | 4.0 | 2.33 | — | 4.5 | 0.020 | 2.86 | 20.0 | 0.20 | 15.20 | 0.01 | 1.652 | 176.10 | 7.82 | 6.3 | 89.4 | 4.3 | -0.59 | 0.27 | 0.28 | — | 2.1 | 0.003 | 0.93 | 0.0 | 0.05 | 13.95 | 0.00 | 2.188 | 20.83 | 0.00 | 9.6 | 89.4 | 1.0 | -2.08 | 2.28 | 0.29 | 0.38 | — | 3855 | 513 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SAG | 10130 | 2021-01-08 | 2019-07-16 | 2.0 | 2.11 | 2.01 | 2.1 | 0.004 | 0.65 | 0.0 | 0.04 | 12.99 | 0.00 | 0.351 | 2.79 | 0.00 | 2.6 | 97.4 | 0.0 | -0.33 | 0.58 | 0.86 | 6.64 | 2.1 | 0.004 | 0.64 | 0.0 | 0.04 | 15.28 | 0.01 | 2.030 | 2.91 | 1.28 | 3.2 | 96.8 | 0.0 | 1.42 | 0.73 | 0.58 | 0.87 | 6.95 | 54080 | 6120 | 240 | 120 | 240 | 2840 | 0 | logfile |
✔ | 6WX6 | 21951 | 2021-01-05 | 2020-05-09 | 2.0 | 2.10 | 2.08 | 2.1 | 0.006 | 0.69 | 0.0 | 0.04 | 14.94 | 0.00 | 2.277 | 0.00 | 0.00 | 1.2 | 98.8 | 0.0 | 1.60 | 0.77 | 0.88 | 7.70 | 2.1 | 0.004 | 0.53 | 0.0 | 0.04 | 16.17 | 0.00 | 2.000 | 2.44 | 0.69 | 1.2 | 98.8 | 0.0 | 4.65 | 0.53 | 0.77 | 0.88 | 7.35 | 68332 | 4128 | 56 | 0 | 8 | 2420 | 32664 | logfile |
✔ | 6X8M | 22094 | 2021-01-10 | 2020-06-01 | 2.2 | 2.07 | 2.27 | 2.2 | 0.005 | 0.63 | 0.0 | 0.05 | 13.91 | 0.01 | 2.264 | 5.26 | 0.82 | 3.3 | 96.7 | 0.0 | -1.41 | 0.74 | 0.86 | 6.01 | 2.1 | 0.004 | 0.71 | 0.0 | 0.05 | 16.05 | 0.01 | 2.119 | 4.23 | 0.64 | 3.1 | 96.9 | 0.0 | -0.14 | 1.62 | 0.76 | 0.87 | 5.90 | 133440 | 16800 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UUS | 20901 | 2021-01-05 | 2019-10-31 | 2.4 | 2.10 | 2.30 | 2.4 | 0.002 | 0.50 | 0.0 | 0.04 | 17.13 | 0.00 | 2.214 | 7.39 | 3.27 | 2.8 | 97.2 | 0.0 | -2.25 | 0.57 | 0.72 | 3.22 | 2.2 | 0.004 | 0.67 | 0.0 | 0.05 | 17.65 | 0.00 | 2.148 | 10.50 | 2.35 | 4.2 | 95.8 | 0.0 | 0.42 | 1.02 | 0.63 | 0.76 | 3.86 | 9308 | 1190 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XS6 | 22301 | 2021-01-06 | 2020-07-15 | 3.7 | 2.21 | — | 2.2 | 0.004 | 0.83 | 0.0 | 0.05 | 14.26 | 0.01 | 2.240 | 4.49 | 0.00 | 6.1 | 93.9 | 0.0 | -1.99 | 0.57 | 0.59 | 2.30 | 2.2 | 0.002 | 0.56 | 0.0 | 0.04 | 14.30 | 0.00 | 2.198 | 7.68 | 0.10 | 4.5 | 95.5 | 0.0 | -0.81 | 0.34 | 0.57 | 0.58 | 2.03 | 18294 | 2357 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WZ5 | 21970 | 2021-01-05 | 2020-05-13 | 2.2 | 2.36 | — | 2.2 | 0.008 | 0.69 | 0.0 | 0.04 | 28.82 | 0.00 | 2.253 | 4.68 | 0.93 | 2.2 | 97.8 | 0.0 | 0.00 | 0.75 | 0.71 | 2.93 | 2.2 | 0.006 | 0.63 | 0.0 | 0.04 | 29.44 | 0.00 | 2.163 | 5.62 | 1.08 | 1.8 | 98.2 | 0.0 | 2.53 | 0.88 | 0.85 | 0.87 | 3.98 | 12443 | 774 | 10 | 306 | 0 | 0 | 0 | logfile |