Table showing results for January 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7A6A	11668	2021-01-06	2020-08-25	1.15	1.13	—	1.2	0.018	1.70	24.0	0.16	14.70	0.01	1.857	3.78	3.03	1.2	98.8	0.0	2.45	0.47	0.61	9.02	1.2	0.003	0.70	0.0	0.04	15.40	0.00	2.095	3.40	1.82	1.8	98.2	0.0	4.60	0.44	0.67	0.78	8.90	41613	4152	72	0	32	4621	0	logfile
✔	7A6B	11669	2021-01-06	2020-08-25	1.33	1.21	—	1.3	0.015	1.60	24.0	0.12	15.33	0.01	1.893	4.57	4.17	1.2	98.8	0.0	2.52	0.52	0.65	9.13	1.3	0.002	0.70	0.0	0.04	14.82	0.01	2.177	3.36	1.79	1.8	98.2	0.0	4.96	0.39	0.73	0.83	9.05	41494	4152	72	0	32	3854	0	logfile
✔	6Z9F	11122	2021-01-06	2020-06-03	1.56	1.61	1.61	1.6	0.015	1.75	48.0	0.10	15.49	0.01	1.782	5.46	3.66	1.7	98.3	0.0	2.70	0.68	0.69	8.63	1.6	0.003	0.67	0.0	0.04	15.04	0.01	2.117	5.13	3.05	1.8	98.2	0.0	4.59	0.98	0.83	0.83	8.49	41020	4152	72	0	32	4172	0	logfile
✔	7C7S	30301	2021-01-05	2020-05-26	2.9	2.38	—	1.8	0.006	0.77	0.0	0.14	13.72	0.01	2.153	7.81	0.00	3.7	96.3	0.0	-2.62	0.83	0.80	2.82	1.8	0.003	0.62	0.0	0.04	12.92	0.00	2.168	8.13	0.00	3.8	96.2	0.0	-0.16	0.61	0.83	0.79	2.49	10915	1355	4	0	9	0	0	logfile
✔	6S61	10101	2021-01-05	2019-07-02	1.84	1.89	1.85	1.9	0.011	1.36	0.0	0.06	12.21	0.01	0.312	2.30	1.29	1.8	98.2	0.0	3.69	0.77	0.86	8.46	1.9	0.004	0.63	0.0	0.04	14.74	0.00	1.787	4.44	0.65	1.2	98.8	0.0	4.14	0.68	0.78	0.86	8.81	71060	4128	72	0	30	3854	32904	logfile
✔	6TAX	10429	2021-01-07	2019-10-31	3.2	2.63	—	1.9	0.009	1.13	0.0	0.06	11.18	0.01	2.065	5.47	0.46	9.5	90.3	0.2	-4.10	0.88	0.80	3.18	1.9	0.003	0.65	0.0	0.04	12.47	0.00	2.052	9.66	0.00	7.7	92.3	0.0	-0.14	1.61	0.85	0.74	2.11	35235	4349	1	0	71	0	0	logfile
✔	6YL3	10835	2021-01-13	2020-04-06	1.98	2.04	1.99	2.0	0.067	3.60	246.0	0.36	16.35	0.02	1.877	4.38	2.74	5.3	94.4	0.4	-2.46	0.78	0.83	6.40	2.0	0.003	0.70	0.0	0.05	16.21	0.00	1.815	4.94	1.46	3.6	96.3	0.1	0.12	0.82	0.79	0.83	6.95	150156	9552	84	0	24	3672	73044	logfile
✔	6UVN	20908	2021-01-06	2019-11-03	3.1	2.62	—	2.0	0.010	0.84	1.0	0.05	14.35	0.00	2.114	18.82	0.52	8.1	91.8	0.1	-3.87	0.89	0.81	2.57	2.0	0.003	0.60	0.0	0.04	13.99	0.00	1.802	12.90	0.00	5.0	95.0	0.0	-0.89	1.18	0.89	0.79	2.55	29487	3461	14	61	83	0	0	logfile
✔	5FTK	3296	2021-01-07	2016-01-14	2.4	2.04	—	2.0	0.011	1.39	0.0	0.07	12.31	0.01	2.216	24.37	0.65	6.1	93.5	0.4	-4.37	0.44	0.66	3.22	2.0	0.004	0.86	0.0	0.05	18.01	0.01	2.106	17.31	4.12	8.7	91.3	0.0	-1.97	1.08	0.47	0.65	1.69	34374	4338	18	0	12	96	0	logfile
✔	5FTJ	3295	2021-01-07	2016-01-14	2.3	2.04	—	2.0	0.010	1.31	0.0	0.18	14.93	0.01	1.862	40.24	0.81	5.7	93.3	1.0	-3.32	0.42	0.64	2.67	2.0	0.004	0.83	0.0	0.05	18.09	0.01	2.100	14.79	2.47	6.5	93.3	0.1	-0.51	1.25	0.46	0.64	1.47	34602	4338	18	0	18	120	0	logfile
✔	6M2W	30067	2021-01-07	2020-03-01	3.8	2.59	3.89	2.6	0.006	1.08	0.0	0.05	15.60	0.01	2.276	3.98	3.59	3.1	96.9	0.0	-5.38	0.77	0.64	0.21	2.1	0.003	0.62	0.0	0.04	13.34	0.00	2.138	8.06	0.00	2.6	97.4	0.0	0.26	1.86	0.83	0.79	2.33	120452	14972	16	0	1828	0	0	logfile
✔	7JJP	22358	2021-01-07	2020-07-27	1.94	2.15	2.08	2.1	0.011	1.21	0.0	0.07	14.56	0.01	2.228	2.51	0.56	1.6	98.4	0.0	0.39	0.71	0.85	5.30	2.1	0.002	0.54	0.0	0.04	14.88	0.00	2.112	7.70	0.65	1.0	99.0	0.0	3.81	0.93	0.72	0.85	4.88	40920	2352	36	0	180	396	19104	logfile
✔	6XEY	22156	2021-01-06	2020-06-14	3.25	3.61	2.92	2.1	0.005	0.81	1.0	0.05	12.58	0.01	2.265	3.59	0.26	5.1	94.8	0.1	-1.87	0.88	0.83	3.34	2.1	0.003	0.55	0.0	0.04	12.56	0.00	2.143	6.78	0.00	4.8	95.2	0.1	-0.36	0.32	0.88	0.83	2.69	28482	3788	24	0	63	0	0	logfile
✔	3KTT	5148	2021-01-05	2009-11-25	4.0	2.33	—	4.5	0.020	2.86	20.0	0.20	15.20	0.01	1.652	176.10	7.82	6.3	89.4	4.3	-0.59	0.27	0.28	—	2.1	0.003	0.93	0.0	0.05	13.95	0.00	2.188	20.83	0.00	9.6	89.4	1.0	-2.08	2.28	0.29	0.38	—	3855	513	1	0	0	0	0	logfile
✔	6SAG	10130	2021-01-08	2019-07-16	2.0	2.11	2.01	2.1	0.004	0.65	0.0	0.04	12.99	0.00	0.351	2.79	0.00	2.6	97.4	0.0	-0.33	0.58	0.86	6.64	2.1	0.004	0.64	0.0	0.04	15.28	0.01	2.030	2.91	1.28	3.2	96.8	0.0	1.42	0.73	0.58	0.87	6.95	54080	6120	240	120	240	2840	0	logfile
✔	6WX6	21951	2021-01-05	2020-05-09	2.0	2.10	2.08	2.1	0.006	0.69	0.0	0.04	14.94	0.00	2.277	0.00	0.00	1.2	98.8	0.0	1.60	0.77	0.88	7.70	2.1	0.004	0.53	0.0	0.04	16.17	0.00	2.000	2.44	0.69	1.2	98.8	0.0	4.65	0.53	0.77	0.88	7.35	68332	4128	56	0	8	2420	32664	logfile
✔	6X8M	22094	2021-01-10	2020-06-01	2.2	2.07	2.27	2.2	0.005	0.63	0.0	0.05	13.91	0.01	2.264	5.26	0.82	3.3	96.7	0.0	-1.41	0.74	0.86	6.01	2.1	0.004	0.71	0.0	0.05	16.05	0.01	2.119	4.23	0.64	3.1	96.9	0.0	-0.14	1.62	0.76	0.87	5.90	133440	16800	60	0	0	0	0	logfile
✔	6UUS	20901	2021-01-05	2019-10-31	2.4	2.10	2.30	2.4	0.002	0.50	0.0	0.04	17.13	0.00	2.214	7.39	3.27	2.8	97.2	0.0	-2.25	0.57	0.72	3.22	2.2	0.004	0.67	0.0	0.05	17.65	0.00	2.148	10.50	2.35	4.2	95.8	0.0	0.42	1.02	0.63	0.76	3.86	9308	1190	7	0	0	0	0	logfile
✔	6XS6	22301	2021-01-06	2020-07-15	3.7	2.21	—	2.2	0.004	0.83	0.0	0.05	14.26	0.01	2.240	4.49	0.00	6.1	93.9	0.0	-1.99	0.57	0.59	2.30	2.2	0.002	0.56	0.0	0.04	14.30	0.00	2.198	7.68	0.10	4.5	95.5	0.0	-0.81	0.34	0.57	0.58	2.03	18294	2357	3	0	0	0	0	logfile
✔	6WZ5	21970	2021-01-05	2020-05-13	2.2	2.36	—	2.2	0.008	0.69	0.0	0.04	28.82	0.00	2.253	4.68	0.93	2.2	97.8	0.0	0.00	0.75	0.71	2.93	2.2	0.006	0.63	0.0	0.04	29.44	0.00	2.163	5.62	1.08	1.8	98.2	0.0	2.53	0.88	0.85	0.87	3.98	12443	774	10	306	0	0	0	logfile

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