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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8RQ4 | 19433 | 2024-04-07 | 2024-01-17 | 3.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11210 | 1402 | 2 | 0 | 3 | 0 | 0 | logfile |
✘ | 8RF0 | 19114 | 2024-04-11 | 2023-12-12 | 3.4 | 4.01 | 3.68 | 3.9 | 0.004 | 0.73 | 1.0 | 0.05 | 16.92 | 0.01 | 2.171 | 10.52 | 0.45 | 8.8 | 90.3 | 0.9 | -1.04 | 0.70 | 0.59 | 0.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21922 | 2780 | 4 | 0 | 19 | 0 | 0 | logfile |
✘ | 8XBX | 38232 | 2024-04-05 | 2023-12-07 | 4.36 | 6.89 | 4.04 | 7.5 | 0.005 | 0.90 | 0.0 | 0.04 | 18.16 | 0.01 | 2.260 | 13.70 | 0.00 | 0.9 | 99.1 | 0.0 | -0.16 | 0.65 | 0.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5873 | 663 | 5 | 38 | 0 | 0 | 0 | logfile |
✘ | 8V7L | 43003 | 2024-04-12 | 2023-12-04 | 2.9 | 3.39 | 2.93 | 3.1 | 0.010 | 1.36 | 0.0 | 0.08 | 21.51 | 0.01 | 2.316 | 1.99 | 2.32 | 3.6 | 96.2 | 0.3 | -1.48 | 0.76 | 0.57 | 3.23 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25545 | 1203 | 12 | 280 | 2 | 0 | 10096 | logfile |
✘ | 8V6V | 43002 | 2024-04-16 | 2023-12-03 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37004 | 1673 | 14 | 294 | 4 | 0 | 17362 | logfile |
✘ | 8X90 | 38158 | 2024-04-11 | 2023-11-29 | 2.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22122 | 2665 | 10 | 0 | 29 | 0 | 0 | logfile |
✘ | 8X93 | 38160 | 2024-04-11 | 2023-11-29 | 2.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21976 | 2659 | 10 | 0 | 28 | 0 | 0 | logfile |
✘ | 8X91 | 38159 | 2024-04-11 | 2023-11-29 | 3.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22269 | 2691 | 11 | 0 | 29 | 0 | 0 | logfile |
✘ | 8UZJ | 42841 | 2024-04-15 | 2023-11-15 | 2.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 33030 | 1970 | 25 | 0 | 55 | 35 | 15835 | logfile |
✘ | 8X43 | 38041 | 2024-04-14 | 2023-11-15 | 3.0 | 3.27 | 3.12 | 3.3 | 0.005 | 0.92 | 0.0 | 0.03 | 17.02 | 0.00 | 1.965 | 12.43 | 0.38 | 3.8 | 96.2 | 0.0 | 2.23 | 0.54 | 0.70 | 2.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30164 | 1880 | 12 | 0 | 4 | 0 | 14984 | logfile |
✘ | 8UXL | 42768 | 2024-04-16 | 2023-11-09 | 3.12 | 4.00 | — | 2.0 | 0.004 | 0.89 | 16.0 | 0.04 | 14.92 | 0.01 | 1.627 | 14.05 | 1.53 | 3.1 | 96.8 | 0.1 | 0.74 | 0.87 | 0.83 | 2.55 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 143500 | 17928 | 20 | 0 | 32 | 0 | 0 | logfile |
✘ | 8R1D | 18808 | 2024-04-14 | 2023-11-01 | 2.37 | 2.35 | 2.20 | 2.4 | 0.008 | 0.85 | 0.0 | 0.05 | 14.94 | 0.01 | 2.112 | 5.41 | 1.11 | 2.9 | 97.1 | 0.0 | -0.07 | 0.70 | 0.86 | 5.08 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30493 | 3876 | 18 | 0 | 30 | 43 | 0 | logfile |
✘ | 8UU7 | 42566 | 2024-04-16 | 2023-10-31 | 3.2 | 3.53 | 3.21 | 3.4 | 0.004 | 0.55 | 0.0 | 0.03 | 22.36 | 0.01 | 1.860 | 6.54 | 0.00 | 5.3 | 94.6 | 0.1 | -1.27 | 0.81 | 0.87 | 2.71 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 145251 | 5827 | 70 | 4613 | 397 | 15 | 0 | logfile |
✘ | 8QZ9 | 18773 | 2024-04-12 | 2023-10-26 | 2.95 | 3.51 | 3.11 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 13.37 | 0.00 | 2.202 | 3.64 | 0.00 | 4.1 | 95.9 | 0.0 | 0.82 | 0.79 | 0.87 | 3.07 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24217 | 3213 | 15 | 0 | 21 | 0 | 0 | logfile |
✘ | 8QYS | 18761 | 2024-04-06 | 2023-10-26 | 3.89 | 4.28 | 3.89 | 4.1 | 0.003 | 0.57 | 2.0 | 0.04 | 14.29 | 0.00 | 2.222 | 9.04 | 0.00 | 10.1 | 89.9 | 0.0 | -1.10 | 0.85 | 0.85 | 1.27 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 57862 | 7588 | 34 | 0 | 0 | 0 | 0 | logfile |
✘ | 8QYN | 18759 | 2024-04-13 | 2023-10-26 | 2.88 | 3.46 | 3.04 | 3.3 | 0.004 | 0.50 | 0.0 | 0.04 | 13.48 | 0.00 | 2.265 | 3.18 | 0.00 | 3.4 | 96.6 | 0.0 | 1.04 | 0.80 | 0.88 | 3.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29115 | 3731 | 17 | 0 | 22 | 0 | 0 | logfile |
✘ | 8UNY | 42421 | 2024-04-06 | 2023-10-19 | 3.6 | 4.06 | 3.81 | 4.0 | 0.006 | 0.97 | 0.0 | 0.06 | 14.64 | 0.01 | 2.255 | 7.64 | 0.00 | 1.7 | 98.3 | 0.0 | 1.32 | 0.63 | 0.80 | 2.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6546 | 912 | 6 | 0 | 2 | 0 | 0 | logfile |
✘ | 8Uo4 | 42427 | 2024-04-05 | 2023-10-19 | 4.0 | 4.28 | 3.99 | 4.2 | 0.004 | 0.72 | 0.0 | 0.04 | 12.00 | 0.00 | 2.322 | 5.46 | 0.00 | 3.2 | 96.8 | 0.0 | -0.04 | 0.69 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5702 | 910 | 6 | 0 | 3 | 0 | 0 | logfile |
✘ | 8UNM | 42409 | 2024-04-05 | 2023-10-19 | 3.4 | 3.77 | 3.54 | 3.7 | 0.005 | 0.64 | 0.0 | 0.04 | 13.95 | 0.00 | 2.208 | 3.37 | 0.00 | 2.5 | 97.5 | 0.0 | 1.00 | 0.64 | 0.86 | 3.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6415 | 889 | 6 | 0 | 2 | 0 | 0 | logfile |
✘ | 8UNF | 42399 | 2024-04-09 | 2023-10-18 | 3.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17810 | 2147 | 14 | 44 | 8 | 0 | 0 | logfile |