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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8F39 | 28835 | 2024-04-16 | 2022-11-09 | 3.5 | 4.18 | 3.05 | 3.6 | 0.003 | 0.74 | 0.0 | 0.04 | 15.48 | 0.01 | 1.955 | 14.72 | 0.22 | 5.2 | 94.6 | 0.2 | 0.30 | 0.77 | 0.70 | 0.90 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38767 | 5098 | 32 | 0 | 9 | 0 | 0 | logfile |
✘ | 8PWL | 17994 | 2024-04-08 | 2023-07-20 | 4.73 | 5.25 | 4.85 | 4.8 | 0.002 | 0.51 | 0.0 | 0.04 | 13.55 | 0.00 | 2.250 | 5.28 | 0.00 | 2.0 | 98.0 | 0.0 | -0.12 | 0.83 | 0.64 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12266 | 1541 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 8FFN | 29048 | 2024-04-10 | 2022-12-09 | 2.96 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19871 | 2408 | 8 | 0 | 17 | 0 | 0 | logfile |
✘ | 8JTY | 36656 | 2024-04-05 | 2023-06-22 | 3.26 | 3.60 | 3.26 | 3.6 | 0.003 | 0.55 | 0.0 | 0.04 | 16.26 | 0.00 | 2.217 | 4.12 | 0.00 | 5.0 | 95.0 | 0.0 | -0.56 | 0.57 | 0.78 | 1.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4274 | 566 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 8i9G | 35270 | 2024-04-06 | 2023-02-06 | 3.2 | 3.67 | 3.09 | 3.6 | 0.005 | 0.67 | 0.0 | 0.05 | 16.41 | 0.00 | 2.213 | 4.97 | 4.97 | 6.6 | 93.4 | 0.0 | -3.28 | 0.72 | 0.83 | 2.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6507 | 778 | 9 | 0 | 13 | 0 | 0 | logfile |
✘ | 8C8H | 16476 | 2024-04-16 | 2023-01-20 | 3.84 | 4.03 | 3.97 | 3.9 | 0.002 | 0.56 | 0.0 | 0.04 | 14.85 | 0.01 | 2.105 | 7.26 | 4.29 | 6.6 | 93.4 | 0.0 | -3.34 | 0.82 | 0.73 | 1.21 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 41296 | 4915 | 27 | 63 | 5 | 61 | 0 | logfile |
✘ | 8iFC | 35412 | 2024-04-15 | 2023-02-17 | 2.9 | 2.92 | 2.87 | 2.9 | 0.008 | 0.64 | 0.0 | 0.04 | 23.41 | 0.02 | 1.672 | 13.72 | 3.37 | 4.4 | 95.6 | 0.0 | 0.30 | 0.54 | 0.79 | 3.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 142560 | 5585 | 72 | 4554 | 490 | 0 | 0 | logfile |
✘ | 8J8K | 36072 | 2024-04-06 | 2023-05-01 | 3.36 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6489 | 855 | 6 | 0 | 3 | 0 | 0 | logfile |
✘ | 8QZ9 | 18773 | 2024-04-12 | 2023-10-26 | 2.95 | 3.51 | 3.11 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 13.37 | 0.00 | 2.202 | 3.64 | 0.00 | 4.1 | 95.9 | 0.0 | 0.82 | 0.79 | 0.87 | 3.07 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24217 | 3213 | 15 | 0 | 21 | 0 | 0 | logfile |
✘ | 8QYN | 18759 | 2024-04-13 | 2023-10-26 | 2.88 | 3.46 | 3.04 | 3.3 | 0.004 | 0.50 | 0.0 | 0.04 | 13.48 | 0.00 | 2.265 | 3.18 | 0.00 | 3.4 | 96.6 | 0.0 | 1.04 | 0.80 | 0.88 | 3.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29115 | 3731 | 17 | 0 | 22 | 0 | 0 | logfile |
✘ | 8TKP | 41356 | 2024-04-08 | 2023-07-25 | 2.9 | 3.69 | 3.00 | 3.2 | 0.005 | 0.91 | 3.0 | 0.05 | 16.84 | 0.01 | 1.152 | 7.90 | 0.94 | 2.1 | 97.9 | 0.0 | 2.30 | 0.59 | 0.61 | 2.02 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14666 | 1698 | 14 | 0 | 54 | 0 | 0 | logfile |
✘ | 8RQ4 | 19433 | 2024-04-07 | 2024-01-17 | 3.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11210 | 1402 | 2 | 0 | 3 | 0 | 0 | logfile |
✘ | 8SGS | 40466 | 2024-04-07 | 2023-04-13 | 3.15 | 3.84 | 3.19 | 3.6 | 0.082 | 3.74 | 0.0 | 0.04 | 15.17 | 0.02 | 1.737 | 12.86 | 1.41 | 1.1 | 98.9 | 0.0 | 1.80 | 0.85 | 0.81 | 3.17 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11720 | 1524 | 8 | 0 | 8 | 0 | 0 | logfile |
✘ | 8J9V | 36116 | 2024-04-08 | 2023-05-05 | 2.71 | 3.58 | 2.71 | 3.1 | 0.003 | 0.59 | 0.0 | 0.04 | 15.16 | 0.00 | 2.053 | 8.83 | 0.00 | 4.1 | 95.9 | 0.0 | 0.57 | 0.90 | 0.87 | 3.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13918 | 1556 | 10 | 60 | 4 | 0 | 0 | logfile |
✘ | 8SWK | 40820 | 2024-04-16 | 2023-05-18 | 4.32 | 4.56 | 4.37 | 4.5 | 0.012 | 1.28 | 0.0 | 0.07 | 12.46 | 0.01 | 2.383 | 1.05 | 0.00 | 3.6 | 95.9 | 0.5 | -0.66 | 0.78 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39510 | 4908 | 12 | 0 | 12 | 0 | 0 | logfile |
✘ | 8CiN | 16680 | 2024-04-15 | 2023-02-10 | 2.7 | 3.46 | 2.86 | 3.2 | 0.004 | 0.52 | 0.0 | 0.04 | 9.97 | 0.00 | 2.238 | 4.66 | 0.70 | 3.6 | 96.4 | 0.0 | 0.29 | 0.84 | 0.87 | 4.00 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35175 | 4479 | 24 | 0 | 51 | 0 | 0 | logfile |
✘ | 8oJ8 | 16908 | 2024-04-16 | 2023-03-24 | 3.3 | 3.75 | 3.22 | 3.3 | 0.002 | 0.39 | 0.0 | 0.03 | 22.12 | 0.00 | 1.849 | 3.71 | 0.09 | 2.3 | 97.6 | 0.0 | 2.20 | 0.86 | 0.86 | 2.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 144625 | 7861 | 64 | 3783 | 225 | 0 | 0 | logfile |
✘ | 8XBX | 38232 | 2024-04-05 | 2023-12-07 | 4.36 | 6.89 | 4.04 | 7.5 | 0.005 | 0.90 | 0.0 | 0.04 | 18.16 | 0.01 | 2.260 | 13.70 | 0.00 | 0.9 | 99.1 | 0.0 | -0.16 | 0.65 | 0.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5873 | 663 | 5 | 38 | 0 | 0 | 0 | logfile |
✘ | 8oJ5 | 16905 | 2024-04-16 | 2023-03-23 | 2.9 | 3.02 | 2.75 | 2.6 | 0.002 | 0.33 | 0.0 | 0.03 | 22.00 | 0.00 | 1.833 | 2.23 | 0.39 | 1.4 | 98.6 | 0.0 | 2.44 | 0.85 | 0.88 | 3.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 145041 | 8000 | 61 | 3742 | 225 | 0 | 0 | logfile |
✘ | 8QUD | 18660 | 2024-04-08 | 2023-10-16 | 2.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12806 | 1580 | 12 | 0 | 22 | 108 | 0 | logfile |