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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8J5A | 35984 | 2024-04-14 | 2023-04-21 | 1.19 | 1.12 | 1.22 | 1.2 | 0.014 | 1.48 | 0.0 | 0.08 | 13.93 | 0.01 | 1.560 | 8.49 | 3.21 | 0.6 | 99.4 | 0.0 | 3.37 | 0.51 | 0.66 | 8.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 56208 | 4128 | 24 | 0 | 24 | 3384 | 17040 | logfile |
✘ | 7K3V | 22657 | 2024-04-16 | 2020-09-14 | 1.34 | 1.44 | — | 1.4 | 0.005 | 0.79 | 0.0 | 0.04 | 21.25 | 0.00 | 0.211 | 2.71 | 0.00 | 1.2 | 98.8 | 0.0 | 3.60 | 0.69 | 0.78 | 8.90 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38406 | 4128 | 72 | 0 | 334 | 2672 | 0 | logfile |
✘ | 7R40 | 14250 | 2024-04-14 | 2022-02-08 | 2.9 | 2.41 | 2.92 | 1.5 | 0.004 | 0.73 | 0.0 | 0.05 | 14.00 | 0.01 | 2.324 | 4.76 | 0.00 | 4.8 | 95.2 | 0.0 | -2.66 | 0.68 | 0.63 | 1.24 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30615 | 3840 | 24 | 0 | 51 | 0 | 0 | logfile |
✘ | 7K3W | 22658 | 2024-04-16 | 2020-09-14 | 1.36 | 1.48 | — | 1.5 | 0.005 | 0.76 | 0.0 | 0.04 | 20.58 | 0.00 | 1.934 | 3.30 | 0.00 | 1.8 | 98.2 | 0.0 | 3.35 | 0.73 | 0.80 | 9.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39086 | 4128 | 72 | 0 | 382 | 2680 | 0 | logfile |
✘ | 7oUG | 13076 | 2024-04-09 | 2021-06-11 | 3.1 | 2.33 | 3.12 | 1.7 | 0.004 | 0.74 | 0.0 | 0.04 | 17.65 | 0.01 | 1.769 | 5.66 | 0.14 | 2.4 | 97.6 | 0.0 | 0.28 | 0.78 | 0.75 | 2.41 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15090 | 1664 | 16 | 80 | 10 | 8 | 0 | logfile |
✘ | 8AG4 | 15415 | 2024-04-07 | 2022-07-19 | 2.46 | 2.04 | 2.48 | 1.7 | 0.003 | 0.49 | 0.0 | 0.04 | 13.59 | 0.00 | 2.170 | 5.34 | 0.00 | 3.9 | 96.1 | 0.0 | 0.77 | 0.82 | 0.83 | 4.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11155 | 1384 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 7U9T | 26408 | 2024-04-16 | 2022-03-11 | 2.68 | 3.04 | — | 1.7 | 0.004 | 0.81 | 2.0 | 0.04 | 14.98 | 0.01 | 2.097 | 10.70 | 1.89 | 3.5 | 96.4 | 0.1 | 0.12 | 0.86 | 0.80 | 2.51 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 143236 | 17912 | 16 | 0 | 12 | 0 | 0 | logfile |
✘ | 7ZCi | 14632 | 2024-04-16 | 2022-03-28 | 2.69 | 2.32 | — | 1.8 | 0.007 | 0.83 | 0.0 | 1.48 | 16.29 | 0.01 | 2.217 | 4.86 | 1.77 | 2.6 | 97.4 | 0.0 | -0.36 | 0.89 | 0.89 | 3.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 36981 | 4650 | 24 | 0 | 28 | 0 | 0 | logfile |
✘ | 8CGU | 16651 | 2024-04-15 | 2023-02-06 | 1.89 | 1.60 | 1.82 | 1.8 | 0.009 | 1.59 | 1.0 | 0.11 | 22.08 | 0.02 | 1.895 | 0.38 | 0.38 | 2.4 | 97.6 | 0.0 | -0.61 | 0.60 | 0.81 | 6.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35196 | 1266 | 31 | 1078 | 87 | 1871 | 0 | logfile |
✘ | 8P2S | 17373 | 2024-04-07 | 2023-05-16 | 2.4 | 2.06 | 2.43 | 1.8 | 0.003 | 0.54 | 0.0 | 0.04 | 12.82 | 0.00 | 2.120 | 8.76 | 3.01 | 4.7 | 95.2 | 0.1 | 0.29 | 0.79 | 0.75 | 4.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9694 | 1201 | 4 | 0 | 6 | 0 | 0 | logfile |
✘ | 7X28 | 32961 | 2024-04-16 | 2022-02-25 | 2.49 | 2.72 | — | 1.8 | 0.013 | 1.52 | 5.0 | 0.11 | 13.24 | 0.00 | 1.606 | 7.72 | 7.98 | 2.7 | 97.0 | 0.2 | 2.21 | 0.57 | 0.40 | 0.90 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 31583 | 4119 | 7 | 0 | 0 | 0 | 0 | logfile |
✘ | 7TU5 | 26126 | 2024-04-16 | 2022-02-02 | 2.1 | 1.97 | 2.06 | 1.8 | 0.009 | 0.85 | 6.0 | 0.06 | 15.88 | 0.01 | 1.910 | 4.33 | 1.54 | 1.4 | 98.6 | 0.0 | 0.64 | 0.84 | 0.82 | 4.27 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19656 | 2574 | 18 | 0 | 6 | 6 | 0 | logfile |
✘ | 7TBG | 25798 | 2024-04-12 | 2021-12-22 | 2.5 | 2.10 | 2.44 | 1.8 | 0.006 | 0.76 | 0.0 | 0.05 | 13.03 | 0.01 | 2.268 | 1.89 | 0.57 | 3.2 | 96.8 | 0.0 | 0.60 | 0.75 | 0.79 | 4.65 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19679 | 1190 | 6 | 0 | 5 | 20 | 9858 | logfile |
✘ | 6TAX | 10429 | 2024-04-15 | 2019-10-31 | 3.2 | 2.63 | — | 1.9 | 0.009 | 1.13 | 0.0 | 0.06 | 11.28 | 0.01 | 2.065 | 5.46 | 0.46 | 9.5 | 90.3 | 0.2 | -4.10 | 0.88 | 0.80 | 3.18 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35235 | 4349 | 1 | 0 | 71 | 0 | 0 | logfile |
✘ | 7S8o | 24899 | 2024-04-06 | 2021-09-18 | 2.58 | 2.12 | 2.59 | 1.9 | 0.007 | 0.72 | 0.0 | 0.05 | 13.52 | 0.00 | 2.102 | 3.18 | 0.00 | 5.8 | 94.2 | 0.0 | 0.31 | 0.81 | 0.80 | 4.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8331 | 1101 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 7Z8V | 14564 | 2024-04-10 | 2022-03-18 | 2.7 | 2.20 | 2.73 | 1.9 | 0.003 | 0.51 | 0.0 | 0.04 | 13.97 | 0.00 | 1.989 | 4.21 | 0.00 | 1.7 | 98.3 | 0.0 | 1.51 | 0.80 | 0.81 | 2.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18313 | 2417 | 6 | 0 | 3 | 0 | 0 | logfile |
✘ | 8BQV | 16188 | 2024-04-06 | 2023-01-18 | 2.0 | 1.96 | 1.89 | 1.9 | 0.008 | 1.01 | 0.0 | 0.07 | 8.75 | 0.00 | 0.000 | 15.01 | 0.00 | 6.8 | 93.2 | 0.0 | -2.59 | 0.54 | 0.77 | 8.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8595 | 1155 | 45 | 0 | 105 | 120 | 0 | logfile |
✘ | 8CAN | 16531 | 2024-04-10 | 2023-01-24 | 1.93 | 1.75 | 1.93 | 1.9 | 0.002 | 0.40 | 0.0 | 0.04 | 9.00 | 0.00 | 2.041 | 2.66 | 0.16 | 0.9 | 99.1 | 0.0 | 1.63 | 0.70 | 0.81 | 6.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 71225 | 4104 | 21 | 0 | 27 | 3170 | 33930 | logfile |
✘ | 7YK5 | 33887 | 2024-04-16 | 2022-07-21 | 2.0 | 1.66 | — | 1.9 | 0.014 | 1.49 | 0.0 | 0.09 | 17.33 | 0.00 | 2.157 | 4.91 | 7.75 | 4.0 | 96.0 | 0.0 | -2.45 | 0.38 | 0.48 | 6.60 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39948 | 5064 | 36 | 0 | 8 | 0 | 0 | logfile |
✘ | 7M3N | 23658 | 2024-04-05 | 2021-03-18 | 2.4 | 2.15 | 2.40 | 1.9 | 0.005 | 0.63 | 0.0 | 0.04 | 15.95 | 0.00 | 2.168 | 5.79 | 4.28 | 4.3 | 95.6 | 0.1 | -2.53 | 0.43 | 0.82 | 4.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6004 | 759 | 3 | 0 | 0 | 0 | 0 | logfile |