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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7PQH | 13594 | 2024-04-15 | 2021-09-17 | 3.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -1.40 | — | — | 0.79 | 1.6 | 0.004 | 0.75 | 0.0 | 0.04 | 16.47 | 0.00 | 2.086 | 15.28 | 2.18 | 6.7 | 93.3 | 0.0 | -0.42 | — | 0.68 | 0.68 | 0.68 | 102671 | 12832 | 12 | 0 | 0 | 0 | 0 | logfile |
✘ | 8JH3 | 36252 | 2024-04-17 | 2023-05-22 | 3.7 | 3.96 | 3.80 | 3.6 | 0.005 | 0.71 | 0.0 | 0.04 | 19.21 | 0.00 | 1.149 | 8.81 | 0.35 | 3.2 | 96.7 | 0.1 | -0.79 | 0.73 | 0.60 | 1.47 | 3.7 | 0.007 | 0.80 | 0.0 | 0.04 | 20.43 | 0.01 | 1.912 | 16.35 | 1.41 | 5.4 | 94.6 | 0.0 | 0.02 | 0.91 | 0.84 | 0.76 | 1.61 | 43416 | 4655 | 29 | 313 | 9 | 0 | 0 | logfile |
✘ | 7RE3 | 24432 | 2024-04-17 | 2021-07-12 | 3.33 | 3.71 | — | 3.5 | 0.006 | 1.05 | 6.0 | 0.05 | 17.69 | 0.01 | 2.063 | 10.86 | 6.67 | 6.3 | 93.7 | 0.0 | -1.70 | 0.79 | 0.81 | 1.98 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 15.86 | 0.00 | 1.980 | 11.23 | 1.28 | 5.1 | 94.8 | 0.0 | -0.47 | 1.25 | 0.80 | 0.83 | 1.93 | 43154 | 5106 | 22 | 142 | 34 | 0 | 0 | logfile |
✘ | 6o7K | 0643 | 2024-04-06 | 2019-03-08 | 4.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -2.76 | — | — | — | 4.1 | 0.010 | 0.91 | 0.0 | 0.05 | 22.81 | 0.01 | 2.040 | 33.34 | 0.04 | 10.7 | 88.8 | 0.5 | -2.23 | — | 0.90 | 0.84 | — | 57748 | 2934 | 25 | 1622 | 0 | 0 | 0 | logfile |
✘ | 8DR0 | 27667 | 2024-04-17 | 2022-07-20 | 2.42 | 3.22 | 2.49 | 3.0 | 0.008 | 0.56 | 0.0 | 0.04 | 17.94 | 0.00 | 2.058 | 3.70 | 1.04 | 1.4 | 98.6 | 0.0 | 2.09 | 0.87 | 0.85 | 3.77 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 17.94 | 0.00 | 1.919 | 4.56 | 0.91 | 1.9 | 98.1 | 0.0 | 1.83 | 1.78 | 0.80 | 0.86 | 3.73 | 42882 | 2608 | 15 | 41 | 8 | 0 | 21368 | logfile |
✘ | 6oQW | 20172 | 2024-04-16 | 2019-04-29 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -2.30 | — | — | 2.57 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 15.86 | 0.00 | 1.972 | 8.60 | 2.15 | 3.0 | 97.0 | 0.0 | 0.85 | — | 0.78 | 0.87 | 2.29 | 36901 | 4847 | 28 | 0 | 12 | 0 | 0 | logfile |
✘ | 8B6C | 15863 | 2024-04-14 | 2022-09-26 | 2.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 139959 | 6963 | 61 | 3890 | 184 | 0 | 0 | logfile |
✘ | 8DEU | 27399 | 2024-04-13 | 2022-06-21 | 2.95 | 3.22 | 3.03 | 3.1 | 0.006 | 0.97 | 0.0 | 0.05 | 15.99 | 0.00 | 2.211 | 14.97 | 3.07 | 4.7 | 95.3 | 0.0 | -1.69 | 0.68 | 0.83 | 2.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29088 | 3130 | 7 | 0 | 27 | 0 | 4959 | logfile |
✘ | 7TP2 | 26046 | 2024-04-12 | 2022-01-24 | 3.72 | 4.22 | — | 3.7 | 0.014 | 1.76 | 6.0 | 0.10 | 13.20 | 0.01 | 2.529 | 0.21 | 1.32 | 7.2 | 92.4 | 0.4 | -1.34 | 0.85 | 0.84 | 2.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24663 | 3047 | 20 | 0 | 61 | 0 | 0 | logfile |
✘ | 7LQZ | 23492 | 2024-04-11 | 2021-02-15 | 3.41 | 3.83 | — | 3.7 | 0.013 | 1.55 | 0.0 | 0.06 | 20.37 | 0.01 | 2.211 | 5.55 | 0.35 | 7.3 | 92.7 | 0.0 | -5.71 | 0.68 | 0.79 | 2.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22765 | 2604 | 8 | 0 | 37 | 0 | 0 | logfile |
✘ | 7RWA | 24712 | 2024-04-09 | 2021-08-19 | 4.7 | 5.66 | 4.89 | 4.6 | 0.003 | 0.89 | 0.0 | 0.05 | 5.84 | 0.00 | 1.914 | 2.65 | 0.00 | 5.8 | 93.7 | 0.5 | -0.12 | 0.84 | 0.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16158 | 3244 | 10 | 0 | 0 | 0 | 0 | logfile |
✘ | 7RH5 | 24455 | 2024-04-14 | 2021-07-16 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 93342 | 6072 | 44 | 0 | 66 | 0 | 44380 | logfile |
✘ | 7TLB | 25986 | 2024-04-11 | 2022-01-18 | 3.06 | 3.26 | — | 3.2 | 0.012 | 1.74 | 1.0 | 0.09 | 13.14 | 0.01 | 2.531 | 0.11 | 0.82 | 5.3 | 94.7 | 0.1 | -1.00 | 0.54 | 0.56 | 2.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22806 | 2916 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7KW7 | 23050 | 2024-04-17 | 2020-11-30 | 3.57 | 4.37 | 3.64 | 3.7 | 0.021 | 1.73 | 0.0 | 0.10 | 11.04 | 0.01 | 1.517 | 0.96 | 0.00 | 1.3 | 98.7 | 0.0 | 0.61 | 0.86 | 0.74 | 1.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 43780 | 2727 | 8 | 0 | 6 | 0 | 21928 | logfile |
✘ | 7XW5 | 33491 | 2024-04-08 | 2022-05-26 | 2.96 | 3.19 | 2.99 | 3.2 | 0.014 | 1.88 | 8.0 | 0.10 | 12.54 | 0.02 | 2.119 | 2.60 | 0.53 | 4.6 | 95.4 | 0.0 | -0.98 | 0.61 | 0.73 | 3.28 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12618 | 1522 | 10 | 0 | 27 | 0 | 0 | logfile |
✘ | 7T6X | 25730 | 2024-04-07 | 2021-12-14 | 3.83 | 4.14 | 3.83 | 4.0 | 0.022 | 1.97 | 0.0 | 0.13 | 15.96 | 0.02 | 1.505 | 3.89 | 0.00 | 3.8 | 96.1 | 0.1 | -0.16 | 0.77 | 0.82 | 2.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9217 | 1140 | 19 | 0 | 37 | 0 | 0 | logfile |
✘ | 7CG7 | 30351 | 2024-04-16 | 2020-06-30 | 3.61 | 3.98 | — | 3.9 | 0.005 | 0.66 | 0.0 | 0.04 | 12.61 | 0.00 | 2.027 | 9.40 | 2.26 | 5.6 | 94.4 | 0.0 | -2.97 | 0.77 | 0.82 | 1.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40290 | 5100 | 34 | 0 | 0 | 0 | 0 | logfile |
✘ | 7AQo | 11871 | 2024-04-16 | 2020-10-22 | 4.5 | 4.75 | — | 3.9 | 0.008 | 1.02 | 16.0 | 0.07 | 16.27 | 0.01 | 1.547 | 11.13 | 10.45 | 6.2 | 93.6 | 0.2 | -1.71 | 0.71 | 0.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40261 | 5611 | 12 | 0 | 0 | 0 | 0 | logfile |
✘ | 6i84 | 4429 | 2024-04-17 | 2018-11-19 | 4.4 | 8.42 | 4.46 | 3.4 | 0.008 | 1.11 | 0.0 | 0.06 | 22.28 | 0.01 | 2.063 | 11.17 | 0.79 | 11.8 | 88.2 | 0.1 | -4.33 | 0.79 | 0.57 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 43988 | 4665 | 29 | 337 | 9 | 0 | 0 | logfile |
✘ | 7LN4 | 23448 | 2024-04-15 | 2021-02-06 | 3.0 | 3.91 | 3.03 | 3.5 | 0.009 | 0.65 | 0.0 | 0.04 | 13.67 | 0.01 | 2.019 | 7.53 | 0.03 | 2.1 | 97.9 | 0.0 | 1.49 | 0.80 | 0.71 | 1.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35094 | 4432 | 13 | 0 | 42 | 0 | 0 | logfile |