The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6o7K | 0643 | 2024-04-06 | 2019-03-08 | 4.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -2.76 | — | — | — | 4.1 | 0.010 | 0.91 | 0.0 | 0.05 | 22.81 | 0.01 | 2.040 | 33.34 | 0.04 | 10.7 | 88.8 | 0.5 | -2.23 | — | 0.90 | 0.84 | — | 57748 | 2934 | 25 | 1622 | 0 | 0 | 0 | logfile |
✘ | 8DR0 | 27667 | 2024-04-17 | 2022-07-20 | 2.42 | 3.22 | 2.49 | 3.0 | 0.008 | 0.56 | 0.0 | 0.04 | 17.94 | 0.00 | 2.058 | 3.70 | 1.04 | 1.4 | 98.6 | 0.0 | 2.09 | 0.87 | 0.85 | 3.77 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 17.94 | 0.00 | 1.919 | 4.56 | 0.91 | 1.9 | 98.1 | 0.0 | 1.83 | 1.78 | 0.80 | 0.86 | 3.73 | 42882 | 2608 | 15 | 41 | 8 | 0 | 21368 | logfile |
✘ | 7RE3 | 24432 | 2024-04-17 | 2021-07-12 | 3.33 | 3.71 | — | 3.5 | 0.006 | 1.05 | 6.0 | 0.05 | 17.69 | 0.01 | 2.063 | 10.86 | 6.67 | 6.3 | 93.7 | 0.0 | -1.70 | 0.79 | 0.81 | 1.98 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 15.86 | 0.00 | 1.980 | 11.23 | 1.28 | 5.1 | 94.8 | 0.0 | -0.47 | 1.25 | 0.80 | 0.83 | 1.93 | 43154 | 5106 | 22 | 142 | 34 | 0 | 0 | logfile |
✘ | 8JH3 | 36252 | 2024-04-17 | 2023-05-22 | 3.7 | 3.96 | 3.80 | 3.6 | 0.005 | 0.71 | 0.0 | 0.04 | 19.21 | 0.00 | 1.149 | 8.81 | 0.35 | 3.2 | 96.7 | 0.1 | -0.79 | 0.73 | 0.60 | 1.47 | 3.7 | 0.007 | 0.80 | 0.0 | 0.04 | 20.43 | 0.01 | 1.912 | 16.35 | 1.41 | 5.4 | 94.6 | 0.0 | 0.02 | 0.91 | 0.84 | 0.76 | 1.61 | 43416 | 4655 | 29 | 313 | 9 | 0 | 0 | logfile |
✘ | 6oQW | 20172 | 2024-04-16 | 2019-04-29 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -2.30 | — | — | 2.57 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 15.86 | 0.00 | 1.972 | 8.60 | 2.15 | 3.0 | 97.0 | 0.0 | 0.85 | — | 0.78 | 0.87 | 2.29 | 36901 | 4847 | 28 | 0 | 12 | 0 | 0 | logfile |
✘ | 7PQH | 13594 | 2024-04-15 | 2021-09-17 | 3.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -1.40 | — | — | 0.79 | 1.6 | 0.004 | 0.75 | 0.0 | 0.04 | 16.47 | 0.00 | 2.086 | 15.28 | 2.18 | 6.7 | 93.3 | 0.0 | -0.42 | — | 0.68 | 0.68 | 0.68 | 102671 | 12832 | 12 | 0 | 0 | 0 | 0 | logfile |
✘ | 6QUM | 4640 | 2024-04-17 | 2019-02-27 | 3.25 | 3.47 | — | 3.4 | 0.007 | 1.10 | 0.0 | 0.06 | 10.75 | 0.01 | 2.095 | 4.88 | 0.82 | 6.7 | 93.2 | 0.0 | -3.78 | 0.83 | 0.87 | 2.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 44900 | 5874 | 27 | 0 | 3 | 0 | 0 | logfile |
✘ | 8F6T | 28890 | 2024-04-05 | 2022-11-17 | 2.76 | 3.61 | 2.91 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 12.87 | 0.00 | 2.119 | 4.79 | 0.00 | 5.4 | 94.6 | 0.0 | 0.80 | 0.65 | 0.86 | 3.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3473 | 428 | 1 | 0 | 4 | 0 | 0 | logfile |
✘ | 7X76 | 33033 | 2024-04-07 | 2022-03-09 | 3.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64334 | 3793 | 18 | 168 | 15 | 0 | 31436 | logfile |
✘ | 8EAo | 27792 | 2024-04-10 | 2022-08-29 | 3.2 | 4.04 | 3.15 | 20.0 | 0.003 | 0.60 | 0.0 | 0.05 | 14.09 | 0.00 | 2.197 | 10.56 | 0.10 | 3.6 | 96.4 | 0.0 | 1.03 | 0.18 | 0.04 | -0.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 71628 | 8964 | 24 | 0 | 0 | 0 | 0 | logfile |
✘ | 6EVW | 3961 | 2024-04-16 | 2017-11-02 | 4.4 | 4.34 | — | 4.3 | 0.005 | 0.84 | 0.0 | 0.05 | 11.54 | 0.01 | 2.091 | 6.08 | 0.00 | 5.0 | 95.0 | 0.0 | -4.53 | 0.86 | 0.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40536 | 5112 | 24 | 0 | 24 | 0 | 0 | logfile |
✘ | 7WTG | 32785 | 2024-04-05 | 2022-02-04 | 3.8 | 3.93 | — | 3.9 | 0.006 | 1.20 | 0.0 | 0.07 | 14.44 | 0.01 | 2.297 | 4.61 | 0.00 | 9.1 | 90.9 | 0.0 | -2.94 | 0.67 | 0.73 | 2.60 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3318 | 425 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7K45 | 22660 | 2024-04-05 | 2020-09-14 | 3.7 | 3.90 | 3.76 | 3.9 | 0.014 | 1.42 | 0.0 | 0.08 | 9.35 | 0.01 | 2.568 | 0.35 | 0.00 | 2.2 | 97.8 | 0.0 | 0.92 | 0.79 | 0.78 | 4.02 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3038 | 419 | 4 | 0 | 2 | 0 | 0 | logfile |
✘ | 7NDC | 12283 | 2024-04-14 | 2021-01-30 | 4.1 | 4.42 | — | 4.2 | 0.003 | 0.56 | 0.0 | 0.04 | 11.86 | 0.00 | 2.118 | 3.57 | 0.37 | 3.9 | 96.1 | 0.0 | -0.43 | 0.83 | 0.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30645 | 3852 | 27 | 0 | 54 | 0 | 0 | logfile |
✘ | 7NUR | 12600 | 2024-04-06 | 2021-03-13 | 3.125 | 3.29 | — | 3.3 | 0.007 | 0.77 | 0.0 | 0.05 | 14.31 | 0.01 | 2.174 | 5.26 | 0.11 | 7.7 | 92.0 | 0.3 | -4.11 | 0.77 | 0.87 | 3.09 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8245 | 1044 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 6PEE | 20315 | 2024-04-16 | 2019-06-20 | 3.42 | 3.27 | — | 3.5 | 0.007 | 0.87 | 0.0 | 0.05 | 13.95 | 0.01 | 2.186 | 3.14 | 0.34 | 5.8 | 94.2 | 0.0 | -3.95 | 0.84 | 0.86 | 2.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40440 | 5175 | 30 | 0 | 45 | 0 | 0 | logfile |
✘ | 6PCi | 20301 | 2024-04-10 | 2019-06-17 | 4.12 | 4.25 | — | 4.1 | 0.009 | 1.05 | 0.0 | 0.06 | 10.80 | 0.01 | 2.268 | 6.36 | 0.00 | 6.8 | 93.2 | 0.0 | -2.72 | 0.85 | 0.84 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18828 | 2382 | 24 | 0 | 27 | 0 | 0 | logfile |
✘ | 6MN7 | 9166 | 2024-04-11 | 2018-10-01 | 4.8 | 5.01 | — | 5.0 | 0.016 | 2.23 | 12.0 | 0.12 | 17.86 | 0.02 | 1.395 | 35.74 | 0.57 | 8.6 | 89.4 | 2.0 | -2.34 | 0.50 | 0.19 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21447 | 2418 | 66 | 0 | 192 | 0 | 0 | logfile |
✘ | 7RH6 | 24456 | 2024-04-14 | 2021-07-16 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 90627 | 5901 | 42 | 0 | 60 | 0 | 43188 | logfile |
✘ | 7SRR | 25402 | 2024-04-07 | 2021-11-08 | 2.9 | 2.20 | — | 2.0 | 0.005 | 0.67 | 0.0 | 0.05 | 12.70 | 0.00 | 2.196 | 3.95 | 0.12 | 3.4 | 96.6 | 0.0 | 0.15 | 0.80 | 0.78 | 3.23 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8394 | 1119 | 5 | 0 | 1 | 0 | 0 | logfile |