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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6o7K | 0643 | 2024-04-06 | 2019-03-08 | 4.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -2.76 | — | — | — | 4.1 | 0.010 | 0.91 | 0.0 | 0.05 | 22.81 | 0.01 | 2.040 | 33.34 | 0.04 | 10.7 | 88.8 | 0.5 | -2.23 | — | 0.90 | 0.84 | — | 57748 | 2934 | 25 | 1622 | 0 | 0 | 0 | logfile |
✘ | 7PQH | 13594 | 2024-04-15 | 2021-09-17 | 3.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -1.40 | — | — | 0.79 | 1.6 | 0.004 | 0.75 | 0.0 | 0.04 | 16.47 | 0.00 | 2.086 | 15.28 | 2.18 | 6.7 | 93.3 | 0.0 | -0.42 | — | 0.68 | 0.68 | 0.68 | 102671 | 12832 | 12 | 0 | 0 | 0 | 0 | logfile |
✘ | 8JH3 | 36252 | 2024-04-17 | 2023-05-22 | 3.7 | 3.96 | 3.80 | 3.6 | 0.005 | 0.71 | 0.0 | 0.04 | 19.21 | 0.00 | 1.149 | 8.81 | 0.35 | 3.2 | 96.7 | 0.1 | -0.79 | 0.73 | 0.60 | 1.47 | 3.7 | 0.007 | 0.80 | 0.0 | 0.04 | 20.43 | 0.01 | 1.912 | 16.35 | 1.41 | 5.4 | 94.6 | 0.0 | 0.02 | 0.91 | 0.84 | 0.76 | 1.61 | 43416 | 4655 | 29 | 313 | 9 | 0 | 0 | logfile |
✘ | 7RE3 | 24432 | 2024-04-17 | 2021-07-12 | 3.33 | 3.71 | — | 3.5 | 0.006 | 1.05 | 6.0 | 0.05 | 17.69 | 0.01 | 2.063 | 10.86 | 6.67 | 6.3 | 93.7 | 0.0 | -1.70 | 0.79 | 0.81 | 1.98 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 15.86 | 0.00 | 1.980 | 11.23 | 1.28 | 5.1 | 94.8 | 0.0 | -0.47 | 1.25 | 0.80 | 0.83 | 1.93 | 43154 | 5106 | 22 | 142 | 34 | 0 | 0 | logfile |
✘ | 6oQW | 20172 | 2024-04-16 | 2019-04-29 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -2.30 | — | — | 2.57 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 15.86 | 0.00 | 1.972 | 8.60 | 2.15 | 3.0 | 97.0 | 0.0 | 0.85 | — | 0.78 | 0.87 | 2.29 | 36901 | 4847 | 28 | 0 | 12 | 0 | 0 | logfile |
✘ | 8DR0 | 27667 | 2024-04-17 | 2022-07-20 | 2.42 | 3.22 | 2.49 | 3.0 | 0.008 | 0.56 | 0.0 | 0.04 | 17.94 | 0.00 | 2.058 | 3.70 | 1.04 | 1.4 | 98.6 | 0.0 | 2.09 | 0.87 | 0.85 | 3.77 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 17.94 | 0.00 | 1.919 | 4.56 | 0.91 | 1.9 | 98.1 | 0.0 | 1.83 | 1.78 | 0.80 | 0.86 | 3.73 | 42882 | 2608 | 15 | 41 | 8 | 0 | 21368 | logfile |
✘ | 7WSU | 32767 | 2024-04-07 | 2022-02-01 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9440 | 1202 | 4 | 0 | 8 | 0 | 0 | logfile |
✘ | 7JMG | 22393 | 2024-04-08 | 2020-07-31 | 4.5 | 7.15 | — | 4.3 | 0.005 | 0.93 | 0.0 | 0.05 | 9.82 | 0.01 | 1.373 | 7.38 | 0.27 | 10.3 | 89.6 | 0.1 | -4.77 | 0.57 | 0.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✘ | 7SPi | 24771 | 2024-04-06 | 2021-11-02 | 2.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 7P00 | 13140 | 2024-04-06 | 2021-06-29 | 2.71 | 2.90 | — | 3.0 | 0.012 | 1.68 | 8.0 | 0.11 | 12.35 | 0.01 | 2.236 | 4.97 | 0.81 | 3.4 | 96.6 | 0.0 | -0.50 | 0.68 | 0.82 | 3.71 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9110 | 1144 | 7 | 0 | 2 | 0 | 0 | logfile |
✘ | 7JMJ | 22396 | 2024-04-08 | 2020-07-31 | 4.5 | 5.51 | — | 4.3 | 0.007 | 1.08 | 0.0 | 0.05 | 10.58 | 0.01 | 1.373 | 9.90 | 0.62 | 11.3 | 88.5 | 0.3 | -4.67 | 0.56 | 0.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✘ | 7MGW | 23830 | 2024-04-05 | 2021-04-13 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6223 | 765 | 5 | 0 | 18 | 0 | 0 | logfile |
✘ | 7DWQ | 30882 | 2024-04-10 | 2021-01-17 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19961 | 1943 | 18 | 0 | 100 | 0 | 0 | logfile |
✘ | 7JMF | 22392 | 2024-04-08 | 2020-07-31 | 4.5 | 5.06 | — | 4.7 | 0.005 | 0.98 | 0.0 | 0.05 | 10.23 | 0.01 | 1.373 | 8.08 | 0.36 | 11.2 | 88.6 | 0.2 | -4.91 | 0.54 | 0.27 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✘ | 6U5K | 20648 | 2024-04-06 | 2019-08-27 | 3.5 | 3.54 | — | 3.5 | 0.005 | 0.78 | 0.0 | 0.05 | 12.14 | 0.01 | 2.210 | 5.29 | 3.00 | 7.0 | 93.0 | 0.0 | -5.23 | 0.53 | 0.83 | 2.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 110106 | 14520 | 54 | 0 | 0 | 0 | 0 | logfile |
✘ | 7TJQ | 25929 | 2024-04-14 | 2022-01-16 | 3.13 | 2.03 | — | 2.0 | 0.004 | 0.77 | 0.0 | 0.05 | 13.28 | 0.01 | 2.288 | 1.08 | 1.03 | 4.5 | 95.5 | 0.0 | -0.55 | 0.75 | 0.75 | 3.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20538 | 2679 | 21 | 0 | 12 | 0 | 0 | logfile |
✘ | 7ZDB | 14640 | 2024-04-06 | 2022-03-29 | 3.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8803 | 1122 | 4 | 0 | 6 | 0 | 0 | logfile |
✘ | 7K3V | 22657 | 2024-04-16 | 2020-09-14 | 1.34 | 1.44 | — | 1.4 | 0.005 | 0.79 | 0.0 | 0.04 | 21.25 | 0.00 | 0.211 | 2.71 | 0.00 | 1.2 | 98.8 | 0.0 | 3.60 | 0.69 | 0.78 | 8.90 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38406 | 4128 | 72 | 0 | 334 | 2672 | 0 | logfile |
✘ | 6PV6 | 20486 | 2024-04-09 | 2019-07-19 | 4.5 | 5.79 | — | 3.8 | 0.006 | 1.04 | 0.0 | 0.05 | 10.65 | 0.01 | 1.373 | 9.47 | 0.31 | 11.0 | 88.9 | 0.1 | -4.72 | 0.60 | 0.39 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✘ | 7TF7 | 25864 | 2024-04-16 | 2022-01-06 | 2.13 | 2.24 | — | 2.2 | 0.004 | 0.61 | 0.0 | 0.04 | 15.42 | 0.00 | 2.187 | 5.57 | 1.43 | 2.5 | 97.4 | 0.1 | 1.01 | 0.47 | 0.70 | 5.40 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39976 | 4980 | 12 | 0 | 0 | 0 | 0 | logfile |