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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8ED9 | 28033 | 2024-04-14 | 2022-09-03 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 32229 | 3872 | 12 | 0 | 81 | 0 | 0 | logfile |
✘ | 6DQN | 7981 | 2024-04-13 | 2018-06-11 | 3.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 138876 | 8744 | 8 | 0 | 8 | 0 | 69396 | logfile |
✘ | 7VCF | 31890 | 2024-04-16 | 2021-09-02 | 2.5 | 2.41 | 2.38 | 2.3 | 0.007 | 1.08 | 2.0 | 0.13 | 15.16 | 0.01 | 2.057 | 3.71 | 0.19 | 5.5 | 94.3 | 0.2 | -1.21 | 0.79 | 0.81 | 3.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39626 | 4841 | 20 | 0 | 7 | 2 | 0 | logfile |
✘ | 7V8A | 31795 | 2024-04-16 | 2021-08-22 | 2.7 | 3.21 | — | 3.1 | 0.004 | 0.58 | 0.0 | 0.04 | 14.61 | 0.00 | 2.123 | 10.02 | 0.00 | 4.9 | 95.1 | 0.0 | -0.03 | 0.74 | 0.78 | 1.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39922 | 4869 | 50 | 0 | 92 | 0 | 0 | logfile |
✘ | 7CM5 | 30401 | 2024-04-16 | 2020-07-24 | 2.6 | 2.44 | — | 2.7 | 0.003 | 0.77 | 0.0 | 0.04 | 8.24 | 0.01 | 2.309 | 3.65 | 0.00 | 3.8 | 96.2 | 0.0 | -3.70 | 0.75 | 0.77 | 1.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38304 | 4888 | 8 | 0 | 0 | 0 | 0 | logfile |
✘ | 8EDW | 28041 | 2024-04-08 | 2022-09-06 | 3.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14321 | 1804 | 4 | 0 | 28 | 0 | 0 | logfile |
✘ | 6RRS | 4989 | 2024-04-14 | 2019-05-20 | 3.9 | 4.30 | 4.41 | 3.8 | 0.013 | 2.10 | 0.0 | 0.00 | 2.04 | 0.01 | 2.364 | 0.79 | 0.00 | 3.9 | 95.3 | 0.8 | -0.85 | 0.56 | 0.64 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 93060 | 23220 | 180 | 0 | 0 | 0 | 0 | logfile |
✘ | 7JM6 | 22386 | 2024-04-11 | 2020-07-31 | 2.92 | 2.96 | — | 2.9 | 0.005 | 0.79 | 0.0 | 0.18 | 14.55 | 0.00 | 1.907 | 6.01 | 0.72 | 2.3 | 97.7 | 0.0 | 1.30 | 0.58 | 0.81 | 3.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21084 | 1334 | 6 | 0 | 12 | 72 | 10504 | logfile |
✘ | 7CM6 | 30402 | 2024-04-16 | 2020-07-25 | 3.0 | 2.48 | — | 3.0 | 0.004 | 0.82 | 0.0 | 0.05 | 8.99 | 0.01 | 2.281 | 3.06 | 0.00 | 3.6 | 96.4 | 0.0 | -4.13 | 0.72 | 0.74 | 2.21 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38680 | 4888 | 16 | 0 | 8 | 0 | 0 | logfile |
✘ | 6DRC | 7994 | 2024-04-13 | 2018-06-11 | 3.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 138860 | 8744 | 8 | 0 | 16 | 0 | 69384 | logfile |
✘ | 7S3D | 24821 | 2024-04-11 | 2021-09-05 | 2.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 75150 | 7074 | 78 | 0 | 417 | 333 | 0 | logfile |
✘ | 6o2P | 0611 | 2024-04-07 | 2019-02-24 | 3.3 | 3.80 | — | 3.8 | 0.014 | 1.83 | 0.0 | 0.64 | 22.92 | 0.00 | 1.908 | 0.66 | 1.16 | 4.5 | 95.5 | 0.0 | -3.17 | 0.51 | 0.72 | 2.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9767 | 1179 | 3 | 0 | 29 | 0 | 0 | logfile |
✘ | 7S4L | 24830 | 2024-04-16 | 2021-09-09 | 2.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21153 | 2556 | 21 | 0 | 36 | 3 | 0 | logfile |
✘ | 7KKL | 22910 | 2024-04-05 | 2020-10-27 | 2.85 | 3.36 | 2.85 | 3.2 | 0.020 | 1.69 | 0.0 | 0.12 | 9.89 | 0.01 | 2.377 | 0.94 | 0.41 | 1.5 | 98.5 | 0.0 | 0.96 | 0.80 | 0.84 | 4.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52461 | 3360 | 27 | 0 | 63 | 0 | 25437 | logfile |
✘ | 6DR0 | 7987 | 2024-04-14 | 2018-06-11 | 4.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 139988 | 8750 | 8 | 0 | 8 | 0 | 70013 | logfile |
✘ | 7FiX | 31605 | 2024-04-11 | 2021-08-01 | 1.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 73929 | 7137 | 96 | 0 | 444 | 348 | 0 | logfile |
✘ | 7XZH | 33527 | 2024-04-16 | 2022-06-02 | 2.78 | 3.49 | 3.05 | 3.2 | 0.008 | 0.98 | 3.0 | 0.06 | 15.73 | 0.00 | 2.064 | 10.40 | 1.23 | 4.5 | 95.4 | 0.2 | -1.32 | 0.71 | 0.73 | 1.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37073 | 4379 | 12 | 0 | 24 | 0 | 0 | logfile |
✘ | 6DQS | 7983 | 2024-04-13 | 2018-06-11 | 4.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 139314 | 8750 | 8 | 0 | 8 | 0 | 69639 | logfile |
✘ | 6DQJ | 7978 | 2024-04-13 | 2018-06-11 | 3.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 138477 | 8724 | 8 | 0 | 4 | 0 | 69265 | logfile |
✘ | 7T6L | 25718 | 2024-04-10 | 2021-12-14 | 3.7 | 4.01 | — | 3.9 | 0.007 | 1.18 | 0.0 | 0.07 | 15.11 | 0.01 | 2.245 | 5.37 | 0.00 | 4.8 | 95.2 | 0.0 | -4.03 | 0.68 | 0.82 | 1.57 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19412 | 2424 | 4 | 0 | 0 | 0 | 0 | logfile |