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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8iJB | 35484 | 2024-04-06 | 2023-02-27 | 3.23 | 3.78 | 1.14 | 3.6 | 0.006 | 1.54 | 20.0 | 0.11 | 19.14 | 0.02 | 1.921 | 16.10 | 8.31 | 8.3 | 91.4 | 0.3 | -1.26 | 0.65 | 0.80 | 2.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8842 | 1136 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 8J5A | 35984 | 2024-04-14 | 2023-04-21 | 1.19 | 1.12 | 1.22 | 1.2 | 0.014 | 1.48 | 0.0 | 0.08 | 13.93 | 0.01 | 1.560 | 8.49 | 3.21 | 0.6 | 99.4 | 0.0 | 3.37 | 0.51 | 0.66 | 8.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 56208 | 4128 | 24 | 0 | 24 | 3384 | 17040 | logfile |
✘ | 7EFD | 31084 | 2024-04-05 | 2021-03-21 | 1.77 | 1.78 | 1.82 | 1.9 | 0.033 | 3.16 | 12.0 | 0.09 | 15.32 | 0.02 | 0.001 | 1.61 | 2.15 | 1.7 | 97.5 | 0.8 | -0.54 | 0.74 | 0.82 | 5.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4004 | 480 | 4 | 0 | 4 | 156 | 0 | logfile |
✘ | 8CGU | 16651 | 2024-04-15 | 2023-02-06 | 1.89 | 1.60 | 1.82 | 1.8 | 0.009 | 1.59 | 1.0 | 0.11 | 22.08 | 0.02 | 1.895 | 0.38 | 0.38 | 2.4 | 97.6 | 0.0 | -0.61 | 0.60 | 0.81 | 6.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35196 | 1266 | 31 | 1078 | 87 | 1871 | 0 | logfile |
✘ | 8T6R | 41078 | 2024-04-16 | 2023-06-17 | 1.78 | 1.90 | 1.85 | 1.9 | 0.006 | 0.89 | 0.0 | 0.06 | 15.76 | 0.01 | 2.121 | 4.24 | 1.88 | 2.0 | 98.0 | 0.0 | 0.87 | 0.74 | 0.80 | 7.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 142800 | 18120 | 60 | 0 | 0 | 0 | 0 | logfile |
✘ | 8BQV | 16188 | 2024-04-06 | 2023-01-18 | 2.0 | 1.96 | 1.89 | 1.9 | 0.008 | 1.01 | 0.0 | 0.07 | 8.75 | 0.00 | 0.000 | 15.01 | 0.00 | 6.8 | 93.2 | 0.0 | -2.59 | 0.54 | 0.77 | 8.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8595 | 1155 | 45 | 0 | 105 | 120 | 0 | logfile |
✘ | 8CU8 | 26996 | 2024-04-15 | 2022-05-16 | 1.91 | 2.52 | 1.91 | 2.2 | 0.005 | 0.65 | 0.0 | 0.05 | 13.91 | 0.01 | 2.043 | 0.74 | 0.00 | 0.6 | 99.4 | 0.0 | 1.28 | 0.87 | 0.93 | 5.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35271 | 4032 | 72 | 0 | 24 | 2271 | 0 | logfile |
✘ | 8CAN | 16531 | 2024-04-10 | 2023-01-24 | 1.93 | 1.75 | 1.93 | 1.9 | 0.002 | 0.40 | 0.0 | 0.04 | 9.00 | 0.00 | 2.041 | 2.66 | 0.16 | 0.9 | 99.1 | 0.0 | 1.63 | 0.70 | 0.81 | 6.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 71225 | 4104 | 21 | 0 | 27 | 3170 | 33930 | logfile |
✘ | 7Z15 | 14441 | 2024-04-17 | 2022-02-24 | 1.93 | 2.40 | 1.98 | 2.3 | 0.012 | 1.01 | 9.0 | 0.06 | 15.88 | 0.01 | 1.723 | 3.87 | 0.83 | 1.6 | 98.4 | 0.0 | 1.32 | 0.83 | 0.86 | 6.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 46112 | 2888 | 32 | 0 | 16 | 1171 | 22357 | logfile |
✘ | 6SAG | 10130 | 2024-04-05 | 2019-07-16 | 2.0 | 2.11 | 2.01 | 2.1 | 0.004 | 0.65 | 0.0 | 0.04 | 13.90 | 0.00 | 0.351 | 2.79 | 0.00 | 2.6 | 97.4 | 0.0 | -0.33 | 0.58 | 0.86 | 6.64 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 54080 | 6120 | 240 | 120 | 240 | 2840 | 0 | logfile |
✘ | 8G6Y | 29788 | 2024-04-14 | 2023-02-16 | 2.09 | 1.85 | 2.01 | 1.9 | 0.007 | 0.87 | 0.0 | 0.05 | 23.23 | 0.02 | 1.446 | 5.72 | 3.72 | 3.5 | 96.3 | 0.2 | -1.60 | 0.73 | 0.86 | 6.08 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 93683 | 3175 | 69 | 3037 | 250 | 3460 | 0 | logfile |
✘ | 8P76 | 17519 | 2024-04-05 | 2023-05-30 | 2.0 | 1.89 | 2.02 | 2.0 | 0.006 | 0.63 | 0.0 | 0.04 | 17.10 | 0.00 | 2.258 | 6.57 | 0.90 | 1.3 | 98.5 | 0.2 | 1.97 | 0.66 | 0.79 | 5.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5261 | 630 | 7 | 0 | 2 | 151 | 0 | logfile |
✘ | 8DBi | 27285 | 2024-04-08 | 2022-06-14 | 2.0 | 2.07 | 2.03 | 2.0 | 0.012 | 1.17 | 0.0 | 0.06 | 18.16 | 0.04 | 1.910 | 5.92 | 1.15 | 4.3 | 95.7 | 0.0 | 0.57 | 0.73 | 0.87 | 6.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14496 | 1854 | 18 | 0 | 30 | 12 | 0 | logfile |
✘ | 7Z18 | 14444 | 2024-04-16 | 2022-02-24 | 1.98 | 2.40 | 2.04 | 2.3 | 0.008 | 0.94 | 0.0 | 0.06 | 15.45 | 0.01 | 1.726 | 3.36 | 1.19 | 1.9 | 98.1 | 0.0 | 1.45 | 0.79 | 0.82 | 5.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37659 | 2432 | 18 | 0 | 10 | 2 | 18660 | logfile |
✘ | 7TU5 | 26126 | 2024-04-16 | 2022-02-02 | 2.1 | 1.97 | 2.06 | 1.8 | 0.009 | 0.85 | 6.0 | 0.06 | 15.88 | 0.01 | 1.910 | 4.33 | 1.54 | 1.4 | 98.6 | 0.0 | 0.64 | 0.84 | 0.82 | 4.27 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19656 | 2574 | 18 | 0 | 6 | 6 | 0 | logfile |
✘ | 7ZZ6 | 15036 | 2024-04-06 | 2022-05-25 | 2.15 | 2.39 | 2.12 | 2.1 | 0.006 | 0.68 | 0.0 | 0.04 | 17.30 | 0.00 | 1.385 | 8.71 | 3.48 | 2.9 | 97.1 | 0.0 | 0.64 | 0.91 | 0.90 | 4.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8257 | 1017 | 6 | 0 | 6 | 157 | 0 | logfile |
✘ | 8PN7 | 17777 | 2024-04-15 | 2023-06-30 | 2.03 | 2.46 | 2.13 | 2.4 | 0.044 | 1.46 | 0.0 | 0.04 | 13.01 | 0.00 | 1.664 | 8.62 | 0.35 | 1.5 | 98.5 | 0.0 | 1.20 | 0.72 | 0.85 | 5.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 34872 | 4308 | 36 | 0 | 12 | 1476 | 0 | logfile |
✘ | 8BQW | 16189 | 2024-04-09 | 2023-01-18 | 2.3 | 2.12 | 2.14 | 2.2 | 0.008 | 1.14 | 0.0 | 0.07 | 8.96 | 0.00 | 0.052 | 12.77 | 0.00 | 9.6 | 90.4 | 0.0 | -3.78 | 0.46 | 0.75 | 7.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17385 | 2310 | 90 | 0 | 270 | 135 | 0 | logfile |
✘ | 7ZYY | 15028 | 2024-04-15 | 2022-05-25 | 2.12 | 2.40 | 2.14 | 2.1 | 0.007 | 0.89 | 0.0 | 0.05 | 17.50 | 0.00 | 2.008 | 4.42 | 1.19 | 2.4 | 97.6 | 0.0 | -0.65 | 0.91 | 0.89 | 4.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 33924 | 4224 | 12 | 0 | 28 | 324 | 0 | logfile |
✘ | 8SR1 | 40717 | 2024-04-17 | 2023-05-05 | 2.18 | 2.37 | 2.20 | 2.3 | 0.009 | 1.11 | 0.0 | 0.05 | 22.92 | 0.01 | 1.795 | 20.32 | 3.93 | 6.0 | 93.5 | 0.5 | 0.61 | 0.68 | 0.66 | 2.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22854 | 2577 | 27 | 0 | 66 | 351 | 0 | logfile |