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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7KoD | 22972 | 2023-02-26 | 2020-11-08 | 1.655 | 2.30 | — | 1.9 | 0.001 | 0.33 | 0.0 | 0.03 | 8.49 | 0.00 | 2.288 | 0.80 | 0.00 | 1.1 | 98.9 | 0.0 | 6.14 | 0.91 | 0.91 | 8.16 | 2.0 | 0.005 | 0.49 | 0.0 | 0.04 | 13.86 | 0.00 | 1.860 | 2.84 | 0.22 | 0.6 | 99.4 | 0.0 | 5.19 | 0.83 | 0.87 | 0.93 | 8.00 | 68186 | 4128 | 48 | 0 | 0 | 1727 | 32643 | logfile |
✔ | 7UUR | 26801 | 2023-02-21 | 2022-04-28 | 1.67 | 1.76 | 1.67 | 1.8 | 0.061 | 2.45 | 4.0 | 0.98 | 14.57 | 0.01 | 1.674 | 7.19 | 0.44 | 2.5 | 97.2 | 0.2 | -0.89 | 0.76 | 0.87 | 7.87 | 1.8 | 0.007 | 2.49 | 2.0 | 0.07 | 14.70 | 0.01 | 1.611 | 10.87 | 0.29 | 2.1 | 97.9 | 0.0 | 0.19 | 0.27 | 0.77 | 0.88 | 7.79 | 13683 | 1668 | 12 | 0 | 18 | 603 | 0 | logfile |
✘ | 7A5V | 11657 | 2023-02-23 | 2020-08-22 | 1.7 | 1.73 | 1.69 | 1.8 | 0.014 | 1.59 | 0.0 | 0.09 | 13.54 | 0.02 | 0.000 | 2.35 | 0.48 | 2.2 | 97.8 | 0.0 | -0.05 | 0.61 | 0.79 | 6.90 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21155 | 2275 | 30 | 0 | 85 | 1015 | 0 | logfile |
✔ | 5K12 | 8194 | 2023-02-21 | 2016-05-17 | 1.8 | 2.40 | — | 2.8 | 0.008 | 0.97 | 0.0 | 0.06 | 10.27 | 0.01 | 2.051 | 19.79 | 0.82 | 3.8 | 96.2 | 0.0 | -2.53 | 0.66 | 0.74 | 5.80 | 2.8 | 0.003 | 0.56 | 0.0 | 0.04 | 15.71 | 0.01 | 2.213 | 9.95 | 0.27 | 1.9 | 98.1 | 0.0 | 2.18 | 0.90 | 0.71 | 0.89 | 3.52 | 14856 | 1764 | 12 | 0 | 0 | 1086 | 0 | logfile |
✔ | 7QKY | 14057 | 2023-02-17 | 2021-12-19 | 1.86 | 2.10 | 1.91 | 2.0 | 0.011 | 1.75 | 3.0 | 0.09 | 12.76 | 0.01 | 2.522 | 1.04 | 0.61 | 4.7 | 95.3 | 0.0 | -3.08 | 0.33 | 0.75 | 8.32 | 2.0 | 0.004 | 0.74 | 0.0 | 0.05 | 16.56 | 0.00 | 2.028 | 5.37 | 0.61 | 6.2 | 93.8 | 0.0 | -3.22 | 1.00 | 0.39 | 0.84 | 7.47 | 5760 | 396 | 6 | 0 | 0 | 0 | 2862 | logfile |
✔ | 7o6Q | 12740 | 2023-02-18 | 2021-04-12 | 1.88 | 2.21 | — | 1.9 | 0.010 | 0.71 | 0.0 | 0.05 | 12.80 | 0.01 | 2.115 | 4.83 | 1.25 | 3.2 | 96.8 | 0.0 | -1.61 | 0.88 | 0.85 | 7.59 | 1.9 | 0.002 | 0.47 | 0.0 | 0.04 | 14.51 | 0.00 | 2.189 | 4.72 | 1.63 | 0.8 | 99.2 | 0.0 | 3.42 | 0.36 | 0.90 | 0.90 | 6.06 | 7999 | 997 | 8 | 0 | 0 | 399 | 0 | logfile |
✔ | 7P6A | 13223 | 2023-02-17 | 2021-07-15 | 1.9 | 1.91 | 1.88 | 1.9 | 0.004 | 0.72 | 0.0 | 0.06 | 12.30 | 0.01 | 2.247 | 3.33 | 0.00 | 3.8 | 96.2 | 0.0 | -3.07 | 0.51 | 0.86 | 7.13 | 1.9 | 0.003 | 0.65 | 0.0 | 0.05 | 14.15 | 0.00 | 2.293 | 4.99 | 0.00 | 4.7 | 95.3 | 0.0 | -2.61 | 0.38 | 0.55 | 0.89 | 7.74 | 4166 | 540 | 10 | 0 | 0 | 76 | 0 | logfile |
✔ | 6ZGL | 11210 | 2023-02-21 | 2020-06-19 | 1.9 | 1.87 | — | 1.9 | 0.013 | 1.55 | 0.0 | 0.12 | 15.52 | 0.01 | 2.196 | 9.00 | 3.73 | 1.1 | 98.9 | 0.0 | 0.13 | 0.73 | 0.83 | 7.03 | 1.9 | 0.003 | 0.52 | 0.0 | 0.04 | 15.83 | 0.00 | 2.114 | 4.28 | 0.93 | 0.9 | 99.1 | 0.0 | 3.77 | 0.76 | 0.75 | 0.83 | 7.09 | 15760 | 1848 | 24 | 0 | 0 | 964 | 0 | logfile |
✔ | 7QEQ | 13937 | 2023-02-23 | 2021-12-03 | 1.9 | 2.38 | 1.89 | 2.1 | 0.009 | 0.61 | 0.0 | 0.04 | 12.54 | 0.00 | 2.181 | 2.19 | 1.18 | 1.1 | 98.9 | 0.0 | 1.60 | 0.82 | 0.90 | 4.56 | 2.1 | 0.003 | 0.59 | 0.0 | 0.04 | 14.16 | 0.00 | 2.210 | 2.94 | 1.18 | 1.8 | 98.2 | 0.0 | 3.97 | 0.99 | 0.82 | 0.92 | 4.15 | 19313 | 2268 | 36 | 0 | 60 | 305 | 0 | logfile |
✘ | 7UT6 | 26756 | 2023-02-22 | 2022-04-26 | 1.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16442 | 1998 | 12 | 0 | 8 | 415 | 0 | logfile |
✘ | 7UT7 | 26757 | 2023-02-22 | 2022-04-26 | 1.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16442 | 1998 | 12 | 0 | 8 | 415 | 0 | logfile |
✔ | 7QK5 | 14038 | 2023-02-19 | 2021-12-17 | 1.92 | 1.67 | 1.83 | 2.2 | 0.011 | 1.89 | 4.0 | 0.10 | 10.96 | 0.01 | 2.401 | 0.10 | 0.00 | 4.5 | 95.5 | 0.0 | -1.58 | 0.32 | 0.78 | 6.85 | 2.2 | 0.004 | 0.63 | 0.0 | 0.05 | 18.16 | 0.01 | 2.237 | 3.82 | 1.88 | 3.9 | 96.1 | 0.0 | -1.69 | 1.47 | 0.36 | 0.82 | 7.53 | 10485 | 666 | 18 | 0 | 36 | 0 | 5337 | logfile |
✔ | 7N8o | 24239 | 2023-02-22 | 2021-06-15 | 1.93 | 1.73 | — | 1.9 | 0.024 | 2.36 | 0.0 | 0.10 | 20.29 | 0.01 | 1.522 | 14.75 | 1.91 | 3.0 | 96.9 | 0.1 | 0.75 | 0.73 | 0.75 | 5.48 | 1.8 | 0.005 | 0.83 | 0.0 | 0.05 | 18.83 | 0.01 | 2.005 | 12.99 | 1.51 | 3.0 | 97.0 | 0.0 | 0.85 | 0.34 | 0.75 | 0.77 | 5.43 | 54656 | 5544 | 113 | 0 | 228 | 1236 | 0 | logfile |
✘ | 7D1T | 30547 | 2023-02-21 | 2020-09-15 | 1.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52994 | 5312 | 108 | 0 | 196 | 2432 | 0 | logfile |
✔ | 7MiJ | 23853 | 2023-02-24 | 2021-04-17 | 1.98 | 1.95 | — | 2.0 | 0.010 | 1.38 | 4.0 | 0.05 | 19.92 | 0.01 | 2.320 | 3.08 | 0.18 | 2.8 | 97.2 | 0.0 | -3.96 | 0.75 | 0.81 | 5.48 | 2.0 | 0.002 | 0.51 | 0.0 | 0.04 | 18.05 | 0.00 | 2.213 | 4.43 | 0.92 | 2.6 | 97.4 | 0.0 | 1.38 | 1.08 | 0.75 | 0.80 | 4.57 | 23010 | 2556 | 12 | 0 | 38 | 328 | 0 | logfile |
✔ | 6SAG | 10130 | 2023-02-21 | 2019-07-16 | 2.0 | 2.11 | 2.01 | 2.1 | 0.004 | 0.65 | 0.0 | 0.04 | 12.99 | 0.00 | 0.351 | 2.79 | 0.00 | 2.6 | 97.4 | 0.0 | -0.33 | 0.58 | 0.86 | 6.64 | 2.1 | 0.004 | 0.66 | 0.0 | 0.04 | 15.32 | 0.01 | 2.026 | 3.22 | 1.43 | 2.9 | 97.1 | 0.0 | 1.37 | 0.73 | 0.60 | 0.90 | 6.95 | 54080 | 6120 | 240 | 120 | 240 | 2840 | 0 | logfile |
✔ | 6WX6 | 21951 | 2023-02-26 | 2020-05-09 | 2.0 | 2.11 | 2.08 | 2.1 | 0.006 | 0.69 | 0.0 | 0.04 | 14.94 | 0.00 | 2.277 | 0.00 | 0.00 | 1.2 | 98.8 | 0.0 | 1.60 | 0.77 | 0.88 | 7.70 | 2.1 | 0.003 | 0.52 | 0.0 | 0.03 | 16.21 | 0.00 | 2.020 | 2.93 | 0.69 | 1.2 | 98.8 | 0.0 | 4.75 | 0.53 | 0.79 | 0.90 | 7.39 | 68332 | 4128 | 56 | 0 | 8 | 2420 | 32664 | logfile |
✔ | 7oAE | 12775 | 2023-02-20 | 2021-04-19 | 2.0 | 2.65 | — | 2.2 | 0.008 | 0.53 | 0.0 | 0.05 | 9.44 | 0.00 | 2.440 | 0.99 | 0.00 | 2.6 | 97.4 | 0.0 | 0.22 | 0.77 | 0.91 | 6.46 | 2.2 | 0.002 | 0.50 | 0.0 | 0.04 | 15.02 | 0.00 | 2.263 | 6.20 | 0.54 | 1.4 | 98.6 | 0.0 | 0.51 | 2.66 | 0.78 | 0.93 | 6.32 | 12768 | 1680 | 42 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QEY | 13944 | 2023-02-19 | 2021-12-03 | 2.0 | 2.46 | — | 2.2 | 0.009 | 0.57 | 0.0 | 0.03 | 10.74 | 0.00 | 2.199 | 3.57 | 2.35 | 1.7 | 98.3 | 0.0 | 1.74 | 0.77 | 0.90 | 5.27 | 2.1 | 0.004 | 0.68 | 0.0 | 0.04 | 13.34 | 0.00 | 2.160 | 4.49 | 1.12 | 2.3 | 97.7 | 0.0 | 3.13 | 0.56 | 0.78 | 0.93 | 4.39 | 9467 | 1092 | 18 | 0 | 30 | 281 | 0 | logfile |
✔ | 7RCV | 24407 | 2023-02-22 | 2021-07-08 | 2.01 | 1.78 | — | 1.9 | 0.024 | 2.35 | 0.0 | 0.10 | 20.33 | 0.01 | 1.915 | 13.92 | 1.99 | 2.6 | 97.4 | 0.0 | 0.92 | 0.78 | 0.79 | 5.10 | 1.9 | 0.004 | 0.81 | 0.0 | 0.05 | 18.81 | 0.01 | 2.061 | 12.36 | 1.93 | 2.6 | 97.4 | 0.0 | 0.83 | 0.91 | 0.81 | 0.84 | 5.21 | 54656 | 5544 | 114 | 0 | 228 | 1236 | 0 | logfile |