The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6o1o | 0454 | 2021-01-06 | 2019-02-21 | 3.8 | 4.00 | — | 3.6 | 0.008 | 1.55 | 0.0 | 0.07 | 15.00 | 0.01 | 2.295 | 4.58 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.72 | 0.70 | — | 3.6 | 0.013 | 1.79 | 0.0 | 0.07 | 14.18 | 0.00 | 1.994 | 33.65 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.72 | 0.76 | 0.75 | — | 15193 | 0 | 14 | 66 | 2757 | 0 | 0 | logfile |
✔ | 6PoM | 20416 | 2021-01-05 | 2019-07-04 | 4.9 | 5.01 | — | 5.0 | 0.003 | 0.64 | 0.0 | 0.03 | 17.29 | 0.00 | 2.075 | 3.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.61 | 0.64 | — | 5.0 | 0.010 | 1.28 | 0.0 | 0.06 | 21.79 | 0.01 | 1.928 | 59.11 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.80 | 0.74 | 0.80 | — | 4937 | 0 | 2 | 230 | 0 | 0 | 0 | logfile |
✔ | 6QYZ | 4680 | 2021-01-05 | 2019-03-10 | 4.6 | 2.98 | — | 6.0 | 0.009 | 1.14 | 0.0 | 0.04 | 24.59 | 0.01 | 1.934 | 53.60 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.68 | 0.53 | — | 2.9 | 0.006 | 1.16 | 0.0 | 0.07 | 28.21 | 0.01 | 2.052 | 71.65 | 0.00 | 0.0 | 0.0 | 0.0 | — | 4.55 | 0.73 | 0.67 | — | 7300 | 0 | 5 | 345 | 0 | 0 | 0 | logfile |
✔ | 6UET | 20756 | 2021-01-05 | 2019-09-23 | 4.1 | 4.91 | — | 5.1 | 0.010 | 1.58 | 0.0 | 0.07 | 17.24 | 0.02 | 1.977 | 4.64 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.62 | 0.73 | — | 5.0 | 0.007 | 0.97 | 0.0 | 0.05 | 22.88 | 0.01 | 1.754 | 51.75 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.81 | 0.64 | 0.78 | — | 3869 | 0 | 1 | 119 | 1 | 0 | 1291 | logfile |
✔ | 4UQ8 | 2676 | 2021-01-06 | 2014-06-21 | 4.95 | 5.05 | 4.64 | 4.9 | 0.012 | 2.07 | 23.0 | 1.38 | 6.71 | 0.01 | 1.032 | 64.12 | 25.00 | 0.0 | 0.0 | 0.0 | — | 0.57 | 0.75 | — | 4.9 | 0.013 | 2.52 | 0.0 | 0.41 | 5.92 | 0.00 | 2.134 | 43.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.30 | 0.61 | 0.83 | — | 28647 | 33 | 54 | 0 | 5686 | 0 | 0 | logfile |
✔ | 6oEH | 20020 | 2021-01-07 | 2019-03-27 | 3.8 | 3.93 | — | 3.7 | 0.010 | 1.38 | 0.0 | 0.07 | 11.62 | 0.01 | 2.381 | 2.81 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.38 | 0.77 | — | 3.7 | 0.007 | 1.05 | 0.0 | 0.04 | 5.10 | 0.00 | 2.207 | 12.93 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.57 | 0.37 | 0.76 | — | 32900 | 0 | 14 | 0 | 6580 | 0 | 0 | logfile |
✔ | 5G2Y | 3332 | 2021-01-05 | 2016-04-16 | 4.5 | 4.38 | — | 3.8 | 0.001 | 0.22 | 0.0 | 0.01 | 11.90 | 0.00 | 2.269 | 2.32 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.28 | — | 3.7 | 0.007 | 1.00 | 0.0 | 0.05 | 23.93 | 0.01 | 1.967 | 73.15 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.27 | 0.88 | 0.77 | — | 13494 | 0 | 1 | 630 | 0 | 0 | 0 | logfile |
✔ | 6LHV | 0900 | 2021-01-05 | 2019-12-10 | 4.59 | 4.86 | — | 4.4 | 0.010 | 1.38 | 0.0 | 0.05 | 5.37 | 0.00 | 1.654 | 9.63 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.70 | 0.60 | — | 4.4 | 0.009 | 1.32 | 0.0 | 0.04 | 6.42 | 0.00 | 2.069 | 50.52 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.59 | 0.85 | 0.81 | — | 8456 | 0 | 3 | 0 | 1707 | 0 | 0 | logfile |
✔ | 6UES | 20755 | 2021-01-05 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 17.15 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.77 | — | 3.3 | 0.007 | 0.89 | 0.0 | 0.04 | 21.25 | 0.01 | 1.834 | 37.21 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.33 | 0.87 | 0.82 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |
✔ | 6oEF | 20020 | 2021-01-07 | 2019-03-27 | 3.8 | 3.98 | — | 3.8 | 0.007 | 1.67 | 0.0 | 0.07 | 11.76 | 0.01 | 2.376 | 3.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.47 | 0.78 | — | 3.8 | 0.006 | 1.18 | 0.0 | 0.05 | 5.88 | 0.00 | 2.195 | 7.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.60 | 0.48 | 0.79 | — | 51240 | 0 | 14 | 0 | 10248 | 0 | 0 | logfile |
✔ | 6oDJ | 20021 | 2021-01-06 | 2019-03-26 | 3.5 | 3.75 | — | 3.7 | 0.009 | 1.50 | 0.0 | 0.07 | 11.32 | 0.01 | 2.438 | 2.03 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.81 | 0.81 | — | 3.6 | 0.012 | 1.74 | 0.0 | 0.06 | 7.95 | 0.00 | 2.065 | 11.87 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.66 | 0.81 | 0.84 | — | 25415 | 0 | 17 | 0 | 5083 | 0 | 0 | logfile |
✔ | 6LHW | 0901 | 2021-01-05 | 2019-12-10 | 4.84 | 5.29 | — | 4.6 | 0.008 | 1.37 | 1.0 | 0.05 | 5.28 | 0.00 | 1.530 | 14.43 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.64 | 0.56 | — | 4.7 | 0.007 | 1.25 | 0.0 | 0.04 | 6.28 | 0.00 | 2.051 | 40.84 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.27 | 0.83 | 0.79 | — | 7644 | 0 | 3 | 0 | 1541 | 0 | 0 | logfile |
✔ | 6X5i | 22051 | 2021-01-05 | 2020-05-26 | 4.3 | 4.27 | — | 4.0 | 0.061 | 3.17 | 210.0 | 0.20 | 28.86 | 0.00 | 2.206 | 29.57 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.70 | 0.70 | — | 4.0 | 0.010 | 1.57 | 210.0 | 0.14 | 27.11 | 0.00 | 1.555 | 68.00 | 0.00 | 0.0 | 0.0 | 0.0 | — | 4.23 | 0.68 | 0.74 | — | 4480 | 70 | 70 | 0 | 280 | 0 | 0 | logfile |
✔ | 3J2P | 5499 | 2021-01-05 | 2012-11-30 | 3.6 | 3.28 | — | 3.4 | 0.009 | 1.92 | 0.0 | 0.12 | 17.49 | 0.02 | 2.155 | 106.12 | 20.13 | 29.7 | 46.3 | 24.1 | -7.75 | 0.42 | 0.79 | 1.08 | 3.4 | 0.003 | 0.85 | 0.0 | 0.04 | 15.17 | 0.00 | 1.891 | 70.25 | 0.10 | 18.4 | 78.3 | 3.3 | -3.88 | 1.04 | 0.39 | 0.71 | 1.67 | 9890 | 1134 | 6 | 0 | 6 | 0 | 1086 | logfile |
✘ | 5A9Z | 6396 | 2021-01-13 | 2015-07-23 | 4.7 | 4.83 | — | 4.7 | 0.013 | 1.89 | 26.0 | 0.14 | 23.31 | 0.03 | 0.000 | 196.22 | 29.15 | 25.1 | 49.6 | 25.2 | -7.73 | 0.81 | 0.65 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 150547 | 6671 | 58 | 4527 | 131 | 0 | 0 | logfile |
✔ | 6o9J | 0661 | 2021-01-11 | 2019-03-14 | 3.9 | 3.92 | — | 3.9 | 0.006 | 1.25 | 25.0 | 0.10 | 17.39 | 0.01 | 0.154 | 54.15 | 23.17 | 26.6 | 58.7 | 14.7 | -7.10 | 0.74 | 0.66 | 0.16 | 3.9 | 0.009 | 1.11 | 3.0 | 0.05 | 16.92 | 0.01 | 1.174 | 33.19 | 0.11 | 24.0 | 73.2 | 2.8 | -4.72 | 2.20 | 0.80 | 0.77 | 0.63 | 142682 | 5731 | 53 | 4564 | 0 | 0 | 0 | logfile |
✔ | 3J06 | 5185 | 2021-01-08 | 2011-04-26 | 3.3 | 2.88 | — | 3.5 | 0.011 | 2.34 | 441.0 | 0.15 | 21.08 | 0.01 | 1.607 | 78.71 | 14.71 | 21.1 | 65.4 | 13.5 | -7.24 | 0.56 | 0.80 | 1.90 | 3.2 | 0.003 | 0.81 | 0.0 | 0.04 | 17.73 | 0.01 | 2.219 | 15.71 | 0.84 | 5.4 | 92.7 | 1.9 | -2.47 | 1.60 | 0.54 | 0.75 | 2.52 | 62916 | 7595 | 98 | 147 | 0 | 0 | 0 | logfile |
✔ | 6oSM | 20186 | 2021-01-05 | 2019-05-01 | 3.4 | 3.31 | — | 3.4 | 0.012 | 1.45 | 0.0 | 0.09 | 14.06 | 0.00 | 2.183 | 28.91 | 14.88 | 34.5 | 65.5 | 0.0 | -5.34 | 0.46 | 0.74 | 2.68 | 3.4 | 0.006 | 1.14 | 0.0 | 0.06 | 14.13 | 0.00 | 2.238 | 20.19 | 0.00 | 25.3 | 74.7 | 0.0 | -4.55 | 3.39 | 0.48 | 0.74 | 2.99 | 4100 | 600 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RoW | 4975 | 2021-01-07 | 2019-05-13 | 4.5 | 4.52 | 4.16 | 4.2 | 0.016 | 1.50 | 0.0 | 0.07 | 14.46 | 0.01 | 1.848 | 45.07 | 0.00 | 30.3 | 68.7 | 1.0 | -6.95 | 0.81 | 0.74 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 13.63 | 0.00 | 1.911 | 12.50 | 0.05 | 12.4 | 87.4 | 0.1 | -2.08 | 1.51 | 0.82 | 0.73 | — | 43049 | 3129 | 7 | 0 | 0 | 0 | 20156 | logfile |
✔ | 3LoS | 5137 | 2021-01-08 | 2010-02-04 | 4.3 | 2.98 | — | 3.0 | 0.008 | 2.45 | 224.0 | 0.19 | 19.87 | 0.01 | 2.259 | 86.73 | 23.89 | 17.4 | 68.9 | 13.8 | -6.57 | 0.57 | 0.49 | — | 3.2 | 0.004 | 1.14 | 0.0 | 0.05 | 15.82 | 0.01 | 2.101 | 22.74 | 0.00 | 19.0 | 77.1 | 3.9 | -4.25 | 1.46 | 0.60 | 0.52 | — | 63712 | 8512 | 16 | 0 | 0 | 0 | 0 | logfile |