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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7JV2 | 22491 | 2023-08-09 | 2020-08-20 | 3.5 | 3.49 | 3.41 | 3.7 | 0.015 | 1.39 | 0.0 | 0.08 | 11.43 | 0.01 | 2.587 | 0.00 | 1.32 | 3.6 | 96.4 | 0.0 | 0.82 | 0.69 | 0.74 | 3.48 | 3.7 | 0.004 | 0.72 | 0.0 | 0.04 | 14.90 | 0.00 | 2.223 | 14.03 | 0.44 | 5.5 | 94.5 | 0.0 | -0.83 | 1.27 | 0.71 | 0.77 | 3.76 | 2151 | 282 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QKX | 14056 | 2023-08-10 | 2021-12-19 | 3.16 | 3.10 | 2.99 | 3.2 | 0.011 | 1.82 | 0.0 | 0.09 | 10.51 | 0.01 | 2.523 | 0.00 | 0.00 | 3.3 | 96.7 | 0.0 | -1.48 | 0.39 | 0.79 | 6.00 | 3.2 | 0.003 | 0.57 | 0.0 | 0.05 | 13.15 | 0.00 | 2.100 | 3.96 | 0.00 | 1.6 | 98.4 | 0.0 | -1.71 | 1.18 | 0.40 | 0.85 | 5.25 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 7QK6 | 14039 | 2023-08-09 | 2021-12-17 | 2.27 | 2.34 | 2.17 | 2.3 | 0.011 | 1.84 | 0.0 | 0.09 | 9.70 | 0.01 | 2.520 | 0.00 | 0.00 | 6.4 | 93.6 | 0.0 | -1.99 | 0.37 | 0.79 | 7.78 | 2.3 | 0.002 | 0.59 | 0.0 | 0.05 | 15.99 | 0.00 | 2.381 | 4.46 | 0.69 | 5.8 | 94.2 | 0.0 | -2.24 | 1.45 | 0.38 | 0.85 | 7.07 | 2469 | 162 | 3 | 0 | 0 | 0 | 1278 | logfile |
✔ | 7R4T | 14316 | 2023-08-10 | 2022-02-09 | 2.75 | 2.72 | 2.62 | 2.8 | 0.011 | 1.77 | 0.0 | 0.09 | 11.86 | 0.01 | 2.520 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -2.02 | 0.42 | 0.84 | 4.94 | 2.8 | 0.004 | 0.55 | 0.0 | 0.05 | 15.87 | 0.00 | 2.374 | 2.12 | 0.76 | 2.7 | 97.3 | 0.0 | -1.45 | 2.29 | 0.42 | 0.89 | 6.04 | 7074 | 456 | 6 | 0 | 0 | 0 | 3606 | logfile |
✔ | 8oRF | 17122 | 2023-08-09 | 2023-04-13 | 2.5 | 2.71 | 2.32 | 2.7 | 0.010 | 1.27 | 0.0 | 0.07 | 11.76 | 0.01 | 2.508 | 0.00 | 0.00 | 5.1 | 94.9 | 0.0 | -2.82 | 0.31 | 0.74 | 5.59 | 2.7 | 0.004 | 0.61 | 0.0 | 0.05 | 17.12 | 0.00 | 2.097 | 5.38 | 1.52 | 4.0 | 96.0 | 0.0 | -3.23 | 1.23 | 0.38 | 0.82 | 5.50 | 4653 | 303 | 3 | 0 | 0 | 0 | 2382 | logfile |
✔ | 7QK3 | 14030 | 2023-08-09 | 2021-12-17 | 2.44 | 2.73 | 2.35 | 2.7 | 0.010 | 2.07 | 0.0 | 0.11 | 12.55 | 0.01 | 2.519 | 0.00 | 0.00 | 3.4 | 96.6 | 0.0 | -3.04 | 0.38 | 0.77 | 5.65 | 2.7 | 0.003 | 0.72 | 0.0 | 0.05 | 16.27 | 0.00 | 2.309 | 2.92 | 0.64 | 2.8 | 97.2 | 0.0 | -2.78 | 2.36 | 0.39 | 0.82 | 5.18 | 2742 | 183 | 3 | 0 | 0 | 0 | 1407 | logfile |
✔ | 7QL2 | 14061 | 2023-08-09 | 2021-12-19 | 2.95 | 2.96 | 2.65 | 3.1 | 0.010 | 2.11 | 2.0 | 0.11 | 10.98 | 0.01 | 2.674 | 0.00 | 0.00 | 7.6 | 92.4 | 0.0 | -2.82 | 0.30 | 0.74 | 4.50 | 3.5 | 0.003 | 0.58 | 0.0 | 0.05 | 12.52 | 0.00 | 2.497 | 2.63 | 1.48 | 8.3 | 91.7 | 0.0 | -3.27 | 1.13 | 0.22 | 0.72 | 4.36 | 2286 | 150 | 3 | 0 | 0 | 0 | 1179 | logfile |
✔ | 7UXU | 26862 | 2023-08-10 | 2022-05-06 | 2.74 | 3.09 | 2.80 | 3.1 | 0.007 | 1.01 | 0.0 | 0.06 | 14.12 | 0.01 | 2.519 | 0.00 | 0.00 | 1.9 | 98.1 | 0.0 | -0.46 | 0.58 | 0.88 | 5.36 | 3.0 | 0.002 | 0.52 | 0.0 | 0.04 | 16.52 | 0.00 | 2.133 | 1.60 | 0.62 | 1.7 | 98.3 | 0.0 | 0.38 | 1.29 | 0.54 | 0.86 | 4.10 | 8776 | 536 | 8 | 0 | 4 | 0 | 4268 | logfile |
✔ | 7QKM | 14047 | 2023-08-09 | 2021-12-17 | 2.66 | 2.80 | 2.61 | 2.7 | 0.010 | 1.89 | 1.0 | 0.11 | 12.52 | 0.01 | 2.548 | 0.00 | 0.00 | 7.2 | 92.8 | 0.0 | -1.95 | 0.42 | 0.86 | 6.21 | 2.7 | 0.002 | 0.53 | 0.0 | 0.05 | 16.30 | 0.00 | 1.981 | 4.94 | 0.68 | 4.4 | 95.6 | 0.0 | -1.70 | 1.31 | 0.39 | 0.89 | 5.83 | 5070 | 330 | 6 | 0 | 0 | 0 | 2634 | logfile |
✔ | 7QVC | 14174 | 2023-08-09 | 2022-01-21 | 2.64 | 2.62 | 2.62 | 2.6 | 0.012 | 2.09 | 10.0 | 0.12 | 15.49 | 0.01 | 2.525 | 0.00 | 0.53 | 5.8 | 94.2 | 0.0 | -2.45 | 0.43 | 0.86 | 7.41 | 2.6 | 0.006 | 0.78 | 0.0 | 0.06 | 18.05 | 0.00 | 2.117 | 9.84 | 3.70 | 6.0 | 94.0 | 0.0 | -2.38 | 2.44 | 0.42 | 0.90 | 5.84 | 3255 | 405 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QK1 | 14028 | 2023-08-09 | 2021-12-17 | 3.03 | 3.20 | 2.13 | 3.2 | 0.011 | 1.97 | 2.0 | 0.11 | 12.98 | 0.01 | 2.502 | 0.00 | 0.00 | 5.5 | 94.5 | 0.0 | -1.61 | 0.48 | 0.84 | 4.10 | 3.2 | 0.004 | 0.75 | 0.0 | 0.05 | 16.44 | 0.00 | 2.210 | 6.55 | 0.51 | 3.7 | 96.3 | 0.0 | -1.82 | 3.39 | 0.41 | 0.84 | 4.27 | 3444 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oRG | 17123 | 2023-08-09 | 2023-04-13 | 2.3 | 2.70 | 2.18 | 2.6 | 0.010 | 1.26 | 0.0 | 0.08 | 11.92 | 0.01 | 2.462 | 0.00 | 0.00 | 2.4 | 97.6 | 0.0 | -2.52 | 0.32 | 0.76 | 4.82 | 2.6 | 0.003 | 0.57 | 0.0 | 0.05 | 17.00 | 0.00 | 2.261 | 1.77 | 2.63 | 1.6 | 98.4 | 0.0 | -2.71 | 1.18 | 0.37 | 0.83 | 4.10 | 3966 | 258 | 3 | 0 | 0 | 0 | 2025 | logfile |
✔ | 7QKG | 14041 | 2023-08-09 | 2021-12-17 | 3.36 | 3.19 | 3.09 | 3.4 | 0.010 | 2.03 | 0.0 | 0.10 | 10.76 | 0.01 | 2.528 | 0.00 | 0.00 | 6.4 | 93.6 | 0.0 | -1.98 | 0.38 | 0.80 | 4.23 | 3.5 | 0.003 | 0.59 | 0.0 | 0.05 | 13.27 | 0.00 | 2.236 | 5.27 | 0.00 | 4.5 | 95.5 | 0.0 | -1.51 | 1.16 | 0.36 | 0.83 | 4.87 | 2469 | 162 | 3 | 0 | 0 | 0 | 1278 | logfile |
✔ | 7NCH | 12266 | 2023-08-12 | 2021-01-28 | 3.84 | 3.76 | 3.69 | 3.8 | 0.013 | 1.61 | 2.0 | 0.10 | 14.68 | 0.00 | 2.485 | 0.00 | 0.19 | 9.4 | 90.6 | 0.0 | -3.70 | 0.60 | 0.45 | 2.36 | 3.8 | 0.003 | 0.70 | 2.0 | 0.05 | 15.63 | 0.00 | 1.978 | 9.23 | 0.00 | 11.2 | 88.8 | 0.0 | -4.13 | 1.66 | 0.64 | 0.52 | 2.25 | 11292 | 816 | 12 | 0 | 0 | 0 | 5796 | logfile |
✔ | 7QL3 | 14062 | 2023-08-09 | 2021-12-19 | 3.32 | 3.47 | 3.01 | 3.5 | 0.011 | 2.01 | 8.0 | 0.11 | 12.27 | 0.01 | 2.489 | 0.00 | 0.00 | 7.7 | 92.3 | 0.0 | -3.47 | 0.46 | 0.82 | 4.29 | 3.5 | 0.004 | 0.76 | 0.0 | 0.05 | 13.63 | 0.01 | 2.128 | 5.14 | 0.27 | 4.1 | 95.9 | 0.0 | -2.49 | 1.15 | 0.43 | 0.83 | 4.92 | 3246 | 426 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QJW | 14024 | 2023-08-10 | 2021-12-17 | 2.81 | 2.81 | 1.88 | 2.9 | 0.012 | 2.09 | 0.0 | 0.10 | 11.96 | 0.01 | 2.556 | 0.00 | 0.00 | 2.3 | 96.3 | 1.4 | -1.19 | 0.34 | 0.72 | 5.41 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 15.65 | 0.00 | 2.366 | 4.13 | 1.01 | 2.7 | 97.3 | 0.0 | -1.58 | 1.60 | 0.38 | 0.78 | 4.37 | 7032 | 450 | 6 | 0 | 0 | 0 | 3588 | logfile |
✔ | 7NCA | 12264 | 2023-08-11 | 2021-01-28 | 3.47 | 3.58 | 3.04 | 3.6 | 0.012 | 2.04 | 0.0 | 0.08 | 10.64 | 0.01 | 2.645 | 0.00 | 0.19 | 5.5 | 94.5 | 0.0 | -2.04 | 0.73 | 0.85 | 4.45 | 3.7 | 0.002 | 0.49 | 0.0 | 0.05 | 12.94 | 0.00 | 2.433 | 0.77 | 0.39 | 2.7 | 97.3 | 0.0 | -2.96 | 0.76 | 0.69 | 0.85 | 3.43 | 10428 | 732 | 12 | 0 | 0 | 0 | 5376 | logfile |
✔ | 7QJY | 14026 | 2023-08-09 | 2021-12-17 | 3.14 | 2.93 | 3.08 | 3.1 | 0.011 | 1.87 | 0.0 | 0.09 | 12.32 | 0.01 | 2.519 | 0.00 | 0.25 | 5.7 | 94.3 | 0.0 | -2.50 | 0.38 | 0.82 | 5.27 | 3.1 | 0.007 | 0.81 | 0.0 | 0.05 | 17.02 | 0.00 | 2.151 | 8.68 | 0.76 | 2.3 | 97.7 | 0.0 | -2.24 | 3.43 | 0.35 | 0.83 | 4.41 | 3444 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oG3 | 20051 | 2023-08-09 | 2019-04-01 | 4.1 | 5.37 | — | 6.5 | 0.005 | 1.53 | 0.0 | 0.00 | 0.93 | 0.00 | 2.539 | 0.00 | 0.00 | 0.0 | 99.2 | 0.8 | 0.27 | 0.46 | 0.48 | — | 6.0 | 0.005 | 1.11 | 0.0 | 0.00 | 8.01 | 0.00 | 2.615 | 51.00 | 0.00 | 13.0 | 87.0 | 0.0 | -1.64 | 2.16 | 0.67 | 0.87 | — | 1215 | 396 | 4 | 0 | 9 | 0 | 0 | logfile |
✔ | 6WKT | 21708 | 2023-08-09 | 2020-04-16 | 3.4 | 3.21 | 3.09 | 3.3 | 0.004 | 0.81 | 0.0 | 0.05 | 13.97 | 0.01 | 2.329 | 0.00 | 0.00 | 1.9 | 98.1 | 0.0 | -3.42 | 0.65 | 0.75 | 3.69 | 3.3 | 0.003 | 0.57 | 0.0 | 0.03 | 16.11 | 0.00 | 2.212 | 10.95 | 0.00 | 4.8 | 95.2 | 0.0 | 3.85 | 1.35 | 0.64 | 0.76 | 3.76 | 3152 | 424 | 4 | 0 | 0 | 0 | 0 | logfile |