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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7JG7 | 22313 | 2022-07-04 | 2020-07-18 | 3.5 | 2.41 | 3.57 | 3.4 | 0.008 | 1.54 | 0.0 | 0.00 | 6.82 | 0.01 | 2.433 | 0.00 | 0.00 | 2.9 | 96.9 | 0.1 | -0.73 | 0.63 | 0.55 | — | 2.3 | 0.006 | 1.15 | 0.0 | 0.00 | 7.25 | 0.01 | 2.136 | 3.94 | 0.00 | 14.0 | 85.9 | 0.1 | -2.12 | 1.65 | 0.74 | 0.72 | — | 19316 | 4818 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 7JG6 | 22312 | 2022-07-04 | 2020-07-18 | 3.7 | 2.39 | 3.79 | 2.2 | 0.008 | 1.40 | 0.0 | 0.00 | 6.55 | 0.01 | 2.433 | 0.00 | 0.00 | 2.9 | 97.0 | 0.1 | -0.59 | 0.62 | 0.54 | — | 2.3 | 0.003 | 0.91 | 0.0 | 0.00 | 5.94 | 0.00 | 2.230 | 1.09 | 0.00 | 10.6 | 89.3 | 0.1 | -1.07 | 1.66 | 0.70 | 0.68 | — | 19320 | 4819 | 20 | 0 | 11 | 0 | 0 | logfile |
✘ | 6UXB | 20932 | 2022-07-03 | 2019-11-07 | 4.9 | 5.50 | — | 6.0 | 0.005 | 0.77 | 0.0 | 0.06 | 4.56 | 0.00 | 2.627 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -2.56 | 0.74 | 0.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10344 | 2104 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JBS | 6478 | 2022-07-02 | 2015-10-13 | 2.9 | 3.04 | — | 3.2 | 0.010 | 1.32 | 0.0 | 0.06 | 8.67 | 0.01 | 2.510 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | 0.51 | 0.21 | 0.76 | 4.15 | 3.0 | 0.004 | 0.63 | 0.0 | 0.04 | 18.27 | 0.00 | 2.222 | 7.93 | 3.29 | 1.7 | 98.3 | 0.0 | 0.83 | 1.30 | 0.22 | 0.81 | 3.95 | 1401 | 175 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 6UXA | 20931 | 2022-07-03 | 2019-11-07 | 4.5 | 5.05 | — | 6.0 | 0.005 | 0.77 | 0.0 | 0.06 | 4.56 | 0.00 | 2.628 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -2.56 | 0.71 | 0.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10344 | 2104 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QK6 | 14039 | 2022-07-02 | 2021-12-17 | 2.27 | 2.34 | 2.17 | 2.3 | 0.011 | 1.84 | 0.0 | 0.09 | 9.70 | 0.01 | 2.520 | 0.00 | 0.00 | 6.4 | 93.6 | 0.0 | -1.99 | 0.37 | 0.79 | 7.78 | 2.3 | 0.002 | 0.57 | 0.0 | 0.05 | 15.85 | 0.00 | 2.385 | 4.06 | 0.69 | 5.8 | 94.2 | 0.0 | -2.20 | 1.44 | 0.38 | 0.85 | 7.07 | 2469 | 162 | 3 | 0 | 0 | 0 | 1278 | logfile |
✔ | 7N9Q | 24259 | 2022-07-03 | 2021-06-18 | 4.6 | 4.92 | — | 2.3 | 0.002 | 0.88 | 0.0 | 0.00 | 5.65 | 0.00 | 2.600 | 0.00 | 0.00 | 8.9 | 90.3 | 0.8 | -1.59 | 0.79 | 0.69 | — | 2.5 | 0.003 | 1.01 | 0.0 | 0.00 | 5.01 | 0.00 | 2.577 | 6.97 | 0.00 | 13.1 | 86.1 | 0.9 | -4.51 | 2.40 | 0.85 | 0.81 | — | 6945 | 2315 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oG3 | 20051 | 2022-07-02 | 2019-04-01 | 4.1 | 5.37 | — | 6.5 | 0.005 | 1.53 | 0.0 | 0.00 | 0.93 | 0.00 | 2.539 | 0.00 | 0.00 | 0.0 | 99.2 | 0.8 | 0.27 | 0.46 | 0.48 | — | 6.0 | 0.006 | 1.22 | 0.0 | 0.00 | 8.59 | 0.00 | 2.605 | 57.07 | 0.00 | 14.1 | 85.9 | 0.0 | -1.78 | 2.19 | 0.66 | 0.84 | — | 1215 | 396 | 4 | 0 | 9 | 0 | 0 | logfile |
✔ | 6CoZ | 7545 | 2022-07-02 | 2018-03-13 | 3.36 | 4.78 | — | 4.7 | 0.009 | 1.71 | 0.0 | 0.07 | 5.63 | 0.01 | 2.541 | 0.00 | 0.00 | 3.2 | 96.2 | 0.6 | -2.49 | 0.78 | 0.68 | — | 4.4 | 0.003 | 0.82 | 0.0 | 0.04 | 4.96 | 0.00 | 2.368 | 4.42 | 0.00 | 8.3 | 91.7 | 0.0 | -1.63 | 1.58 | 0.82 | 0.76 | — | 1586 | 320 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QL3 | 14062 | 2022-07-03 | 2021-12-19 | 3.32 | 3.47 | 3.01 | 3.5 | 0.011 | 2.01 | 8.0 | 0.11 | 12.27 | 0.01 | 2.489 | 0.00 | 0.00 | 7.7 | 92.3 | 0.0 | -3.47 | 0.46 | 0.82 | 4.29 | 3.5 | 0.015 | 1.83 | 0.0 | 0.05 | 14.38 | 0.01 | 2.106 | 6.20 | 0.27 | 5.6 | 94.4 | 0.0 | -2.93 | 1.15 | 0.44 | 0.84 | 4.92 | 3246 | 426 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QK3 | 14030 | 2022-07-02 | 2021-12-17 | 2.44 | 2.73 | 2.35 | 2.7 | 0.010 | 2.07 | 0.0 | 0.11 | 12.55 | 0.01 | 2.519 | 0.00 | 0.00 | 3.4 | 96.6 | 0.0 | -3.04 | 0.38 | 0.77 | 5.65 | 2.7 | 0.003 | 0.73 | 0.0 | 0.05 | 16.22 | 0.00 | 2.309 | 3.65 | 1.28 | 4.0 | 96.0 | 0.0 | -2.83 | 1.47 | 0.40 | 0.82 | 5.18 | 2742 | 183 | 3 | 0 | 0 | 0 | 1407 | logfile |
✔ | 7QJY | 14026 | 2022-07-03 | 2021-12-17 | 3.14 | 2.93 | 3.08 | 3.1 | 0.011 | 1.87 | 0.0 | 0.09 | 12.32 | 0.01 | 2.519 | 0.00 | 0.25 | 5.7 | 94.3 | 0.0 | -2.50 | 0.38 | 0.82 | 5.27 | 3.1 | 0.008 | 0.87 | 0.0 | 0.05 | 17.16 | 0.01 | 2.116 | 9.11 | 1.26 | 3.4 | 96.6 | 0.0 | -2.45 | 3.42 | 0.36 | 0.84 | 4.60 | 3444 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QL2 | 14061 | 2022-07-02 | 2021-12-19 | 2.95 | 2.96 | 2.65 | 3.1 | 0.010 | 2.11 | 2.0 | 0.11 | 10.98 | 0.01 | 2.674 | 0.00 | 0.00 | 7.6 | 92.4 | 0.0 | -2.82 | 0.30 | 0.74 | 4.50 | 3.4 | 0.005 | 0.63 | 0.0 | 0.05 | 12.52 | 0.01 | 2.550 | 1.75 | 2.96 | 9.0 | 91.0 | 0.0 | -3.01 | 0.80 | 0.25 | 0.74 | 5.06 | 2286 | 150 | 3 | 0 | 0 | 0 | 1179 | logfile |
✔ | 7QKM | 14047 | 2022-07-03 | 2021-12-17 | 2.66 | 2.80 | 2.61 | 2.7 | 0.010 | 1.89 | 1.0 | 0.11 | 12.52 | 0.01 | 2.548 | 0.00 | 0.00 | 7.2 | 92.8 | 0.0 | -1.95 | 0.42 | 0.86 | 6.21 | 2.7 | 0.002 | 0.52 | 0.0 | 0.05 | 16.25 | 0.00 | 1.952 | 5.53 | 1.02 | 4.7 | 95.3 | 0.0 | -1.72 | 2.16 | 0.39 | 0.89 | 6.16 | 5070 | 330 | 6 | 0 | 0 | 0 | 2634 | logfile |
✔ | 7QVC | 14174 | 2022-07-03 | 2022-01-21 | 2.64 | 2.62 | 2.62 | 2.6 | 0.012 | 2.09 | 10.0 | 0.12 | 15.49 | 0.01 | 2.525 | 0.00 | 0.53 | 5.8 | 94.2 | 0.0 | -2.45 | 0.43 | 0.86 | 7.41 | 2.6 | 0.005 | 0.75 | 0.0 | 0.06 | 17.90 | 0.00 | 2.135 | 8.46 | 3.70 | 5.3 | 94.7 | 0.0 | -2.31 | 2.44 | 0.42 | 0.89 | 6.07 | 3255 | 405 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QKW | 14055 | 2022-07-03 | 2021-12-19 | 2.32 | 1.74 | 2.60 | 2.3 | 0.010 | 1.93 | 1.0 | 0.10 | 13.53 | 0.01 | 2.534 | 0.00 | 0.00 | 5.4 | 94.6 | 0.0 | -2.79 | 0.41 | 0.81 | 7.02 | 2.3 | 0.002 | 0.52 | 0.0 | 0.05 | 16.59 | 0.00 | 2.445 | 2.98 | 1.09 | 4.8 | 95.2 | 0.0 | -2.85 | 1.38 | 0.41 | 0.84 | 5.96 | 4707 | 306 | 6 | 0 | 0 | 0 | 2439 | logfile |
✔ | 7QKG | 14041 | 2022-07-02 | 2021-12-17 | 3.36 | 3.19 | 3.09 | 3.4 | 0.010 | 2.03 | 0.0 | 0.10 | 10.76 | 0.01 | 2.528 | 0.00 | 0.00 | 6.4 | 93.6 | 0.0 | -1.98 | 0.38 | 0.80 | 4.23 | 3.5 | 0.003 | 0.60 | 0.0 | 0.05 | 13.51 | 0.00 | 2.262 | 5.27 | 0.00 | 2.6 | 97.4 | 0.0 | -1.55 | 1.17 | 0.36 | 0.83 | 4.87 | 2469 | 162 | 3 | 0 | 0 | 0 | 1278 | logfile |
✔ | 7QVF | 14176 | 2022-07-03 | 2022-01-21 | 3.64 | 3.54 | 3.42 | 4.1 | 0.012 | 2.10 | 22.0 | 0.12 | 15.51 | 0.01 | 2.525 | 0.00 | 0.53 | 6.0 | 94.0 | 0.0 | -2.41 | 0.43 | 0.77 | 3.90 | 3.6 | 0.004 | 0.89 | 0.0 | 0.06 | 16.73 | 0.00 | 2.143 | 15.98 | 1.06 | 6.9 | 93.1 | 0.0 | -2.46 | 3.87 | 0.40 | 0.75 | 3.40 | 6516 | 810 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JV2 | 22491 | 2022-07-02 | 2020-08-20 | 3.5 | 3.49 | 3.41 | 3.7 | 0.015 | 1.39 | 0.0 | 0.08 | 11.43 | 0.01 | 2.587 | 0.00 | 1.32 | 3.6 | 96.4 | 0.0 | 0.82 | 0.69 | 0.74 | 3.48 | 3.7 | 0.004 | 0.74 | 0.0 | 0.04 | 14.94 | 0.00 | 2.254 | 14.51 | 0.44 | 6.9 | 93.1 | 0.0 | -1.07 | 1.28 | 0.70 | 0.77 | 3.71 | 2151 | 282 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WX6 | 21951 | 2022-07-04 | 2020-05-09 | 2.0 | 2.11 | 2.08 | 2.1 | 0.006 | 0.69 | 0.0 | 0.04 | 14.94 | 0.00 | 2.277 | 0.00 | 0.00 | 1.2 | 98.8 | 0.0 | 1.60 | 0.77 | 0.88 | 7.70 | 2.1 | 0.004 | 0.55 | 0.0 | 0.04 | 16.24 | 0.00 | 2.003 | 3.40 | 0.69 | 1.2 | 98.8 | 0.0 | 4.62 | 0.53 | 0.78 | 0.90 | 7.39 | 68332 | 4128 | 56 | 0 | 8 | 2420 | 32664 | logfile |