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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7JMH | 22394 | 2021-01-07 | 2020-07-31 | 4.5 | 5.68 | — | 4.4 | 0.005 | 1.02 | 0.0 | 0.05 | 10.48 | 0.01 | 1.373 | 9.38 | 0.46 | 11.7 | 88.2 | 0.1 | -4.60 | 0.56 | 0.31 | — | 4.3 | 0.005 | 1.21 | 22.0 | 0.05 | 14.43 | 0.01 | 1.973 | 22.73 | 7.87 | 12.0 | 87.8 | 0.2 | -3.15 | 2.10 | 0.81 | 0.66 | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 7JM7 | 22389 | 2021-01-06 | 2020-07-31 | 2.82 | 3.04 | — | 3.0 | 0.004 | 0.78 | 0.0 | 0.19 | 13.32 | 0.01 | 1.957 | 5.41 | 1.17 | 2.1 | 97.9 | 0.0 | 1.63 | 0.53 | 0.76 | 2.53 | 3.0 | 0.002 | 0.61 | 0.0 | 0.12 | 12.85 | 0.00 | 2.047 | 6.28 | 0.07 | 2.4 | 97.6 | 0.0 | 1.84 | 0.54 | 0.55 | 0.77 | 2.67 | 28596 | 1802 | 16 | 0 | 38 | 36 | 14054 | logfile |
✔ | 7JMJ | 22396 | 2021-01-07 | 2020-07-31 | 4.5 | 5.51 | — | 4.3 | 0.007 | 1.08 | 0.0 | 0.05 | 10.58 | 0.01 | 1.373 | 9.84 | 0.62 | 11.3 | 88.5 | 0.3 | -4.67 | 0.56 | 0.32 | — | 4.4 | 0.005 | 1.20 | 16.0 | 0.05 | 14.78 | 0.01 | 1.981 | 21.26 | 7.64 | 10.6 | 89.1 | 0.2 | -3.00 | 1.67 | 0.80 | 0.66 | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 7JMi | 22395 | 2021-01-08 | 2020-07-31 | 4.5 | 6.62 | — | 4.3 | 0.004 | 0.92 | 0.0 | 0.05 | 10.07 | 0.01 | 1.373 | 7.44 | 0.31 | 10.5 | 89.3 | 0.2 | -4.79 | 0.58 | 0.34 | — | 4.4 | 0.004 | 1.11 | 12.0 | 0.05 | 13.57 | 0.01 | 2.013 | 20.71 | 5.54 | 10.9 | 88.9 | 0.2 | -2.73 | 1.03 | 0.83 | 0.71 | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 7JMF | 22392 | 2021-01-07 | 2020-07-31 | 4.5 | 5.06 | — | 4.7 | 0.005 | 0.99 | 0.0 | 0.05 | 10.23 | 0.01 | 1.373 | 8.03 | 0.36 | 11.2 | 88.6 | 0.2 | -4.91 | 0.54 | 0.27 | — | 7.9 | 0.005 | 1.27 | 24.0 | 0.05 | 15.52 | 0.01 | 2.035 | 23.06 | 10.74 | 11.5 | 88.1 | 0.4 | -3.38 | 1.75 | 0.72 | 0.46 | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 7JM6 | 22386 | 2021-01-06 | 2020-07-31 | 2.92 | 2.96 | — | 2.9 | 0.005 | 0.79 | 0.0 | 0.18 | 13.49 | 0.00 | 1.907 | 5.82 | 0.72 | 2.3 | 97.7 | 0.0 | 1.30 | 0.58 | 0.81 | 3.97 | 2.9 | 0.003 | 0.52 | 0.0 | 0.04 | 13.39 | 0.00 | 1.943 | 6.01 | 0.00 | 2.3 | 97.7 | 0.0 | 1.69 | 1.15 | 0.59 | 0.82 | 3.71 | 21084 | 1334 | 6 | 0 | 12 | 72 | 10504 | logfile |
✔ | 7JMG | 22393 | 2021-01-08 | 2020-07-31 | 4.5 | 7.15 | — | 4.3 | 0.005 | 0.93 | 0.0 | 0.05 | 9.82 | 0.01 | 1.373 | 7.33 | 0.27 | 10.3 | 89.6 | 0.1 | -4.77 | 0.57 | 0.34 | — | 4.6 | 0.004 | 1.06 | 12.0 | 0.05 | 13.57 | 0.01 | 2.064 | 20.07 | 5.46 | 10.4 | 89.6 | 0.1 | -2.87 | 1.65 | 0.83 | 0.71 | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 7JMC | 22391 | 2021-01-07 | 2020-07-31 | 2.5 | 2.76 | 2.68 | 2.7 | 0.009 | 0.75 | 0.0 | 0.06 | 13.91 | 0.01 | 2.249 | 2.74 | 0.57 | 1.6 | 98.4 | 0.0 | 3.40 | 0.62 | 0.82 | 4.76 | 2.7 | 0.002 | 0.49 | 0.0 | 0.04 | 14.30 | 0.00 | 2.170 | 5.65 | 0.90 | 1.4 | 98.6 | 0.0 | 3.71 | 0.57 | 0.62 | 0.83 | 4.10 | 39828 | 2304 | 36 | 0 | 144 | 168 | 18576 | logfile |
✔ | 7JLW | 22382 | 2021-01-07 | 2020-07-30 | 2.5 | 2.52 | 2.49 | 2.5 | 0.009 | 1.07 | 0.0 | 0.07 | 15.05 | 0.00 | 2.377 | 3.99 | 1.14 | 1.1 | 98.9 | 0.0 | 0.51 | 0.62 | 0.82 | 4.64 | 2.5 | 0.002 | 0.48 | 0.0 | 0.04 | 15.49 | 0.00 | 2.070 | 6.86 | 1.23 | 0.8 | 99.2 | 0.0 | 3.32 | 1.01 | 0.64 | 0.83 | 4.06 | 40284 | 2316 | 36 | 0 | 132 | 204 | 18720 | logfile |
✔ | 7CN9 | 30419 | 2021-01-06 | 2020-07-30 | 4.7 | 4.78 | — | 4.7 | 0.010 | 1.16 | 0.0 | 0.07 | 15.31 | 0.01 | 1.927 | 46.00 | 2.39 | 21.4 | 77.5 | 1.1 | -5.89 | 0.53 | 0.74 | — | 4.7 | 0.005 | 0.87 | 0.0 | 0.05 | 13.39 | 0.01 | 1.986 | 24.94 | 0.04 | 13.9 | 86.0 | 0.1 | -3.21 | 1.40 | 0.51 | 0.71 | — | 24052 | 3058 | 19 | 0 | 56 | 0 | 0 | logfile |
✔ | 7JM3 | 22384 | 2021-01-15 | 2020-07-30 | 3.4 | 3.43 | — | 3.4 | 0.013 | 0.96 | 0.0 | 0.06 | 15.30 | 0.01 | 0.521 | 21.42 | 0.00 | 10.1 | 89.5 | 0.4 | -6.47 | 0.55 | 0.72 | 1.95 | 3.4 | 0.003 | 0.69 | 0.0 | 0.04 | 15.12 | 0.00 | 1.974 | 11.02 | 0.04 | 7.4 | 92.6 | 0.0 | -0.84 | 1.28 | 0.59 | 0.79 | 2.78 | 235260 | 15060 | 60 | 0 | 0 | 0 | 118860 | logfile |
✔ | 7CN2 | 30414 | 2021-01-07 | 2020-07-29 | 3.43 | 3.94 | — | 4.0 | 0.006 | 1.06 | 5.0 | 0.06 | 15.71 | 0.01 | 1.385 | 8.80 | 4.47 | 7.9 | 91.5 | 0.6 | -3.95 | 0.37 | 0.80 | 2.16 | 3.9 | 0.003 | 0.68 | 0.0 | 0.04 | 13.82 | 0.00 | 2.135 | 8.97 | 0.06 | 7.3 | 92.5 | 0.1 | -1.65 | 0.74 | 0.36 | 0.78 | 2.42 | 32841 | 4233 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZXJ | 11522 | 2021-01-07 | 2020-07-29 | 3.5 | 3.86 | — | 3.8 | 0.016 | 1.30 | 3.0 | 0.07 | 12.15 | 0.01 | 2.048 | 17.98 | 0.26 | 8.3 | 91.1 | 0.6 | -3.10 | 0.69 | 0.79 | 2.28 | 3.8 | 0.003 | 0.70 | 0.0 | 0.05 | 12.50 | 0.00 | 2.011 | 9.47 | 0.00 | 3.8 | 96.2 | 0.0 | -0.29 | 0.64 | 0.68 | 0.78 | 2.07 | 38244 | 5099 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZXK | 11523 | 2021-01-07 | 2020-07-29 | 3.8 | 4.20 | — | 4.0 | 0.011 | 1.21 | 2.0 | 0.07 | 12.01 | 0.01 | 1.950 | 20.26 | 0.34 | 7.9 | 91.7 | 0.4 | -2.91 | 0.70 | 0.76 | 1.72 | 4.1 | 0.003 | 0.71 | 0.0 | 0.05 | 12.56 | 0.00 | 2.097 | 9.65 | 0.02 | 3.9 | 96.1 | 0.0 | -0.22 | 1.31 | 0.69 | 0.76 | 1.73 | 42292 | 5772 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZXL | 11524 | 2021-01-07 | 2020-07-29 | 4.2 | 4.71 | — | 4.5 | 0.017 | 1.38 | 0.0 | 0.07 | 11.91 | 0.01 | 1.897 | 31.52 | 0.10 | 8.0 | 91.6 | 0.4 | -2.81 | 0.75 | 0.77 | — | 4.5 | 0.003 | 0.73 | 0.0 | 0.05 | 12.33 | 0.00 | 1.971 | 14.20 | 0.00 | 4.6 | 95.4 | 0.0 | -0.38 | 0.79 | 0.75 | 0.77 | — | 42172 | 5772 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZWV | 11497 | 2021-01-06 | 2020-07-28 | 3.5 | 3.91 | 3.55 | 3.7 | 0.009 | 1.34 | 0.0 | 0.10 | 15.28 | 0.01 | 2.025 | 2.97 | 1.74 | 5.0 | 95.0 | 0.0 | -1.71 | 0.83 | 0.82 | 2.19 | 3.7 | 0.005 | 0.63 | 0.0 | 0.05 | 14.45 | 0.00 | 2.171 | 8.37 | 0.08 | 4.7 | 95.3 | 0.0 | -0.16 | 0.70 | 0.84 | 0.84 | 2.38 | 24015 | 2955 | 21 | 0 | 63 | 0 | 0 | logfile |
✔ | 7JK4 | 22361 | 2021-01-06 | 2020-07-27 | 3.4 | 3.91 | 3.45 | 3.6 | 0.006 | 0.95 | 0.0 | 0.05 | 17.55 | 0.01 | 2.102 | 4.61 | 0.32 | 4.1 | 95.9 | 0.0 | -2.88 | 0.87 | 0.88 | 2.64 | 3.6 | 0.003 | 0.55 | 0.0 | 0.04 | 16.82 | 0.00 | 1.989 | 7.65 | 0.00 | 2.2 | 97.8 | 0.0 | 1.78 | 1.04 | 0.88 | 0.88 | 2.38 | 21717 | 2531 | 13 | 68 | 8 | 0 | 0 | logfile |
✔ | 7JK2 | 22359 | 2021-01-06 | 2020-07-27 | 3.2 | 3.80 | 3.18 | 3.4 | 0.006 | 0.92 | 0.0 | 0.05 | 17.56 | 0.01 | 2.092 | 4.03 | 0.23 | 3.5 | 96.5 | 0.0 | -3.50 | 0.85 | 0.86 | 2.35 | 3.4 | 0.002 | 0.57 | 0.0 | 0.04 | 16.16 | 0.00 | 2.079 | 6.98 | 0.00 | 2.5 | 97.5 | 0.0 | 1.64 | 1.09 | 0.86 | 0.86 | 2.13 | 21619 | 2523 | 13 | 66 | 8 | 0 | 0 | logfile |
✔ | 7JK6 | 22363 | 2021-01-06 | 2020-07-27 | 4.0 | 4.53 | 3.98 | 4.0 | 0.008 | 1.27 | 0.0 | 0.07 | 14.68 | 0.01 | 1.967 | 5.90 | 0.24 | 4.4 | 95.6 | 0.0 | -2.89 | 0.87 | 0.78 | — | 4.0 | 0.003 | 0.67 | 0.0 | 0.04 | 13.93 | 0.00 | 1.994 | 10.79 | 0.00 | 2.8 | 97.2 | 0.0 | 1.16 | 1.21 | 0.88 | 0.79 | — | 15161 | 1887 | 9 | 0 | 6 | 0 | 0 | logfile |
✔ | 7JK3 | 22360 | 2021-01-06 | 2020-07-27 | 3.4 | 4.04 | 3.41 | 3.5 | 0.005 | 0.87 | 0.0 | 0.05 | 17.58 | 0.01 | 1.709 | 3.67 | 0.18 | 3.1 | 96.9 | 0.0 | -3.87 | 0.89 | 0.87 | 2.19 | 3.6 | 0.004 | 0.57 | 0.0 | 0.04 | 17.01 | 0.00 | 1.911 | 8.15 | 0.00 | 3.0 | 97.0 | 0.0 | 1.57 | 1.02 | 0.90 | 0.88 | 2.22 | 21661 | 2528 | 13 | 66 | 8 | 0 | 0 | logfile |