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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6VXM | 21444 | 2024-03-16 | 2020-02-22 | 3.06 | 3.76 | — | 3.4 | 0.018 | 1.02 | 0.0 | 0.05 | 12.84 | 0.00 | 2.208 | 5.67 | 0.00 | 3.9 | 96.1 | 0.0 | -2.02 | 0.75 | 0.81 | 2.38 | 3.4 | 0.003 | 0.48 | 0.0 | 0.04 | 13.16 | 0.00 | 2.287 | 4.14 | 1.18 | 2.5 | 97.5 | 0.0 | 2.03 | 1.19 | 0.72 | 0.85 | 2.46 | 15064 | 1939 | 14 | 0 | 21 | 0 | 0 | logfile |
✔ | 6VXM | 21444 | 2024-04-09 | 2020-02-22 | 3.06 | 3.76 | — | 3.4 | 0.018 | 1.02 | 0.0 | 0.05 | 12.84 | 0.00 | 2.208 | 5.67 | 0.00 | 3.9 | 96.1 | 0.0 | -2.02 | 0.75 | 0.81 | 2.38 | 3.4 | 0.003 | 0.48 | 0.0 | 0.04 | 13.16 | 0.00 | 2.287 | 4.14 | 1.18 | 2.5 | 97.5 | 0.0 | 2.03 | 1.19 | 0.72 | 0.85 | 2.46 | 15064 | 1939 | 14 | 0 | 21 | 0 | 0 | logfile |
✔ | 6VXM | 21444 | 2023-10-07 | 2020-02-22 | 3.06 | 3.76 | — | 3.4 | 0.018 | 1.02 | 0.0 | 0.05 | 12.84 | 0.00 | 2.208 | 5.67 | 0.00 | 3.9 | 96.1 | 0.0 | -2.02 | 0.75 | 0.81 | 2.38 | 3.4 | 0.005 | 0.54 | 0.0 | 0.04 | 13.28 | 0.00 | 2.275 | 3.95 | 0.19 | 2.6 | 97.4 | 0.0 | 1.59 | 1.19 | 0.72 | 0.84 | 2.40 | 15064 | 1939 | 14 | 0 | 21 | 0 | 0 | logfile |
✔ | 6VXM | 21444 | 2023-11-16 | 2020-02-22 | 3.06 | 3.76 | — | 3.4 | 0.018 | 1.02 | 0.0 | 0.05 | 12.84 | 0.00 | 2.208 | 5.67 | 0.00 | 3.9 | 96.1 | 0.0 | -2.02 | 0.75 | 0.81 | 2.38 | 3.4 | 0.005 | 0.54 | 0.0 | 0.04 | 13.28 | 0.00 | 2.275 | 3.95 | 0.19 | 2.6 | 97.4 | 0.0 | 1.59 | 1.19 | 0.72 | 0.84 | 2.40 | 15064 | 1939 | 14 | 0 | 21 | 0 | 0 | logfile |
✔ | 6VXM | 21444 | 2023-12-10 | 2020-02-22 | 3.06 | 3.76 | — | 3.4 | 0.018 | 1.02 | 0.0 | 0.05 | 12.84 | 0.00 | 2.208 | 5.67 | 0.00 | 3.9 | 96.1 | 0.0 | -2.02 | 0.75 | 0.81 | 2.38 | 3.4 | 0.005 | 0.54 | 0.0 | 0.04 | 13.28 | 0.00 | 2.275 | 3.95 | 0.19 | 2.6 | 97.4 | 0.0 | 1.59 | 1.19 | 0.72 | 0.84 | 2.40 | 15064 | 1939 | 14 | 0 | 21 | 0 | 0 | logfile |
✔ | 7XEW | 33161 | 2024-02-17 | 2022-03-31 | 2.59 | 3.02 | 2.88 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 13.28 | 0.01 | 2.210 | 10.97 | 1.10 | 5.5 | 94.0 | 0.5 | 0.26 | 0.75 | 0.85 | 2.67 | 3.0 | 0.003 | 0.68 | 0.0 | 0.04 | 16.01 | 0.00 | 2.268 | 8.04 | 3.72 | 4.3 | 95.5 | 0.2 | 1.02 | 0.45 | 0.73 | 0.86 | 2.36 | 19988 | 2456 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XEW | 33161 | 2024-03-18 | 2022-03-31 | 2.59 | 3.02 | 2.88 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 13.28 | 0.01 | 2.210 | 10.97 | 1.10 | 5.5 | 94.0 | 0.5 | 0.26 | 0.75 | 0.85 | 2.67 | 3.0 | 0.003 | 0.68 | 0.0 | 0.04 | 16.01 | 0.00 | 2.268 | 8.04 | 3.72 | 4.3 | 95.5 | 0.2 | 1.02 | 0.45 | 0.73 | 0.86 | 2.36 | 19988 | 2456 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XEW | 33161 | 2024-04-10 | 2022-03-31 | 2.59 | 3.02 | 2.88 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 13.28 | 0.01 | 2.210 | 10.97 | 1.10 | 5.5 | 94.0 | 0.5 | 0.26 | 0.75 | 0.85 | 2.67 | 3.0 | 0.003 | 0.68 | 0.0 | 0.04 | 16.01 | 0.00 | 2.268 | 8.04 | 3.72 | 4.3 | 95.5 | 0.2 | 1.02 | 0.45 | 0.73 | 0.86 | 2.36 | 19988 | 2456 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XEW | 33161 | 2023-07-09 | 2022-03-31 | 2.59 | 3.02 | 2.88 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 13.28 | 0.01 | 2.210 | 10.97 | 1.10 | 5.5 | 94.0 | 0.5 | 0.26 | 0.75 | 0.85 | 2.67 | 3.0 | 0.003 | 0.67 | 0.0 | 0.04 | 16.08 | 0.00 | 2.306 | 7.85 | 2.80 | 4.1 | 95.8 | 0.2 | 1.06 | 0.46 | 0.73 | 0.86 | 2.29 | 19988 | 2456 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XEW | 33161 | 2023-08-16 | 2022-03-31 | 2.59 | 3.02 | 2.88 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 13.28 | 0.01 | 2.210 | 10.97 | 1.10 | 5.5 | 94.0 | 0.5 | 0.26 | 0.75 | 0.85 | 2.67 | 3.0 | 0.003 | 0.67 | 0.0 | 0.04 | 16.08 | 0.00 | 2.306 | 7.85 | 2.80 | 4.1 | 95.8 | 0.2 | 1.06 | 0.46 | 0.73 | 0.86 | 2.29 | 19988 | 2456 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XEW | 33161 | 2023-10-09 | 2022-03-31 | 2.59 | 3.02 | 2.88 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 13.28 | 0.01 | 2.210 | 10.97 | 1.10 | 5.5 | 94.0 | 0.5 | 0.26 | 0.75 | 0.85 | 2.67 | 3.0 | 0.003 | 0.67 | 0.0 | 0.04 | 16.08 | 0.00 | 2.306 | 7.85 | 2.80 | 4.1 | 95.8 | 0.2 | 1.06 | 0.46 | 0.73 | 0.86 | 2.29 | 19988 | 2456 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XEW | 33161 | 2023-11-17 | 2022-03-31 | 2.59 | 3.02 | 2.88 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 13.28 | 0.01 | 2.210 | 10.97 | 1.10 | 5.5 | 94.0 | 0.5 | 0.26 | 0.75 | 0.85 | 2.67 | 3.0 | 0.003 | 0.67 | 0.0 | 0.04 | 16.08 | 0.00 | 2.306 | 7.85 | 2.80 | 4.1 | 95.8 | 0.2 | 1.06 | 0.46 | 0.73 | 0.86 | 2.29 | 19988 | 2456 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XEW | 33161 | 2023-12-12 | 2022-03-31 | 2.59 | 3.02 | 2.88 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 13.28 | 0.01 | 2.210 | 10.97 | 1.10 | 5.5 | 94.0 | 0.5 | 0.26 | 0.75 | 0.85 | 2.67 | 3.0 | 0.003 | 0.67 | 0.0 | 0.04 | 16.08 | 0.00 | 2.306 | 7.85 | 2.80 | 4.1 | 95.8 | 0.2 | 1.06 | 0.46 | 0.73 | 0.86 | 2.29 | 19988 | 2456 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JGE | 22324 | 2024-02-17 | 2020-07-19 | 4.0 | 4.23 | — | 4.2 | 0.002 | 0.44 | 0.0 | 0.05 | 13.35 | 0.00 | 2.115 | 14.01 | 0.00 | 3.7 | 96.3 | 0.0 | 1.11 | 0.54 | 0.54 | — | 4.2 | 0.004 | 0.80 | 0.0 | 0.06 | 15.73 | 0.00 | 1.976 | 19.53 | 1.00 | 6.6 | 93.4 | 0.0 | -0.09 | 0.65 | 0.61 | 0.65 | — | 20315 | 1437 | 1 | 0 | 0 | 0 | 8508 | logfile |
✔ | 7JGE | 22324 | 2024-03-18 | 2020-07-19 | 4.0 | 4.23 | — | 4.2 | 0.002 | 0.44 | 0.0 | 0.05 | 13.35 | 0.00 | 2.115 | 14.01 | 0.00 | 3.7 | 96.3 | 0.0 | 1.11 | 0.54 | 0.54 | — | 4.2 | 0.004 | 0.80 | 0.0 | 0.06 | 15.73 | 0.00 | 1.976 | 19.53 | 1.00 | 6.6 | 93.4 | 0.0 | -0.09 | 0.65 | 0.61 | 0.65 | — | 20315 | 1437 | 1 | 0 | 0 | 0 | 8508 | logfile |
✔ | 7JGE | 22324 | 2024-04-10 | 2020-07-19 | 4.0 | 4.23 | — | 4.2 | 0.002 | 0.44 | 0.0 | 0.05 | 13.35 | 0.00 | 2.115 | 14.01 | 0.00 | 3.7 | 96.3 | 0.0 | 1.11 | 0.54 | 0.54 | — | 4.2 | 0.004 | 0.80 | 0.0 | 0.06 | 15.73 | 0.00 | 1.976 | 19.53 | 1.00 | 6.6 | 93.4 | 0.0 | -0.09 | 0.65 | 0.61 | 0.65 | — | 20315 | 1437 | 1 | 0 | 0 | 0 | 8508 | logfile |
✔ | 7JGE | 22324 | 2023-07-09 | 2020-07-19 | 4.0 | 4.23 | — | 4.2 | 0.002 | 0.44 | 0.0 | 0.05 | 13.35 | 0.00 | 2.115 | 14.01 | 0.00 | 3.7 | 96.3 | 0.0 | 1.11 | 0.54 | 0.54 | — | 4.2 | 0.003 | 0.55 | 0.0 | 0.06 | 15.53 | 0.00 | 2.042 | 17.29 | 0.08 | 7.3 | 92.7 | 0.0 | 0.23 | 0.64 | 0.60 | 0.65 | — | 20315 | 1437 | 1 | 0 | 0 | 0 | 8508 | logfile |
✔ | 7JGE | 22324 | 2023-08-16 | 2020-07-19 | 4.0 | 4.23 | — | 4.2 | 0.002 | 0.44 | 0.0 | 0.05 | 13.35 | 0.00 | 2.115 | 14.01 | 0.00 | 3.7 | 96.3 | 0.0 | 1.11 | 0.54 | 0.54 | — | 4.2 | 0.003 | 0.55 | 0.0 | 0.06 | 15.53 | 0.00 | 2.042 | 17.29 | 0.08 | 7.3 | 92.7 | 0.0 | 0.23 | 0.64 | 0.60 | 0.65 | — | 20315 | 1437 | 1 | 0 | 0 | 0 | 8508 | logfile |
✔ | 6K4M | 9915 | 2024-02-21 | 2019-05-24 | 4.5 | 7.82 | — | 7.8 | 0.006 | 1.01 | 0.0 | 0.05 | 17.74 | 0.00 | 2.258 | 13.35 | 0.54 | 1.8 | 98.2 | 0.0 | -4.61 | 0.68 | 0.84 | — | 7.8 | 0.003 | 0.82 | 0.0 | 0.04 | 15.50 | 0.00 | 2.094 | 18.43 | 0.12 | 1.7 | 98.3 | 0.0 | -0.39 | 1.58 | 0.70 | 0.86 | — | 31508 | 3790 | 48 | 0 | 36 | 0 | 0 | logfile |
✔ | 6iRo | 9720 | 2024-03-16 | 2018-11-13 | 3.4 | 3.71 | — | 3.4 | 0.010 | 1.08 | 0.0 | 0.06 | 26.54 | 0.01 | 2.262 | 4.09 | 0.74 | 5.9 | 94.1 | 0.0 | -4.09 | 0.87 | 0.85 | 2.33 | 3.4 | 0.004 | 0.64 | 0.0 | 0.04 | 26.08 | 0.00 | 2.200 | 9.69 | 1.95 | 4.2 | 95.8 | 0.0 | 0.22 | 1.96 | 0.87 | 0.86 | 1.40 | 16108 | 1262 | 12 | 292 | 1 | 0 | 0 | logfile |