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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8JFK | 36212 | 2024-04-12 | 2023-05-18 | 2.9 | 2.21 | 3.14 | 1.4 | 0.007 | 1.25 | 18.0 | 0.06 | 17.18 | 0.01 | 1.745 | 22.22 | 2.29 | 2.5 | 97.5 | 0.0 | -0.34 | 0.68 | 0.69 | 1.41 | 1.3 | 0.005 | 0.85 | 0.0 | 0.05 | 17.84 | 0.01 | 2.077 | 20.90 | 4.32 | 3.4 | 96.6 | 0.0 | -0.25 | 1.22 | 0.70 | 0.71 | 1.47 | 81428 | 10140 | 24 | 0 | 8 | 0 | 0 | logfile |
✔ | 7A6B | 11669 | 2024-04-12 | 2020-08-25 | 1.33 | 1.21 | — | 1.3 | 0.015 | 1.60 | 24.0 | 0.12 | 16.78 | 0.01 | 1.893 | 4.97 | 4.17 | 1.2 | 98.8 | 0.0 | 2.52 | 0.52 | 0.65 | 9.13 | 1.3 | 0.002 | 0.60 | 0.0 | 0.04 | 14.49 | 0.00 | 2.224 | 2.85 | 1.79 | 1.8 | 98.2 | 0.0 | 4.85 | 0.38 | 0.75 | 0.86 | 9.05 | 41494 | 4152 | 72 | 0 | 32 | 3854 | 0 | logfile |
✔ | 7N5D | 24186 | 2023-12-12 | 2021-06-05 | 2.8 | 2.25 | — | 1.3 | 0.023 | 1.52 | 0.0 | 0.09 | 9.91 | 0.01 | 2.378 | 0.32 | 0.00 | 1.1 | 98.9 | 0.0 | 1.83 | 0.84 | 0.83 | 4.14 | 1.3 | 0.003 | 0.64 | 0.0 | 0.04 | 16.00 | 0.00 | 2.173 | 6.93 | 1.62 | 1.9 | 98.1 | 0.0 | 2.44 | 0.66 | 0.82 | 0.82 | 3.20 | 20593 | 2612 | 14 | 0 | 7 | 0 | 0 | logfile |
✔ | 7N5D | 24186 | 2024-02-18 | 2021-06-05 | 2.8 | 2.25 | — | 1.3 | 0.023 | 1.52 | 0.0 | 0.09 | 9.91 | 0.01 | 2.378 | 0.32 | 0.00 | 1.1 | 98.9 | 0.0 | 1.83 | 0.84 | 0.83 | 4.14 | 1.3 | 0.003 | 0.60 | 0.0 | 0.04 | 16.13 | 0.00 | 2.208 | 6.93 | 2.87 | 1.9 | 98.1 | 0.0 | 2.55 | 0.64 | 0.82 | 0.83 | 3.12 | 20593 | 2612 | 14 | 0 | 7 | 0 | 0 | logfile |
✔ | 7FiJ | 31599 | 2024-01-17 | 2021-07-31 | 3.8 | 2.32 | — | 1.8 | 0.001 | 0.41 | 0.0 | 0.04 | 8.02 | 0.00 | 2.344 | 3.95 | 0.00 | 4.1 | 95.9 | 0.0 | 1.10 | 0.58 | 0.50 | 3.05 | 1.3 | 0.006 | 0.86 | 0.0 | 0.05 | 12.15 | 0.00 | 2.164 | 13.33 | 11.25 | 16.5 | 83.5 | 0.0 | -1.70 | 0.74 | 0.62 | 0.56 | 2.72 | 3061 | 561 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N5D | 24186 | 2023-07-10 | 2021-06-05 | 2.8 | 2.25 | — | 1.3 | 0.023 | 1.52 | 0.0 | 0.09 | 9.91 | 0.01 | 2.378 | 0.32 | 0.00 | 1.1 | 98.9 | 0.0 | 1.83 | 0.84 | 0.83 | 4.14 | 1.3 | 0.003 | 0.64 | 0.0 | 0.04 | 16.00 | 0.00 | 2.173 | 6.93 | 1.62 | 1.9 | 98.1 | 0.0 | 2.44 | 0.66 | 0.82 | 0.82 | 3.20 | 20593 | 2612 | 14 | 0 | 7 | 0 | 0 | logfile |
✔ | 8iKJ | 35514 | 2024-03-10 | 2023-02-28 | 3.2 | 2.32 | — | 1.5 | 0.005 | 0.70 | 0.0 | 0.08 | 12.44 | 0.01 | 2.162 | 5.92 | 0.00 | 3.0 | 97.0 | 0.0 | 1.60 | 0.77 | 0.75 | 2.35 | 1.4 | 0.005 | 0.75 | 0.0 | 0.04 | 13.85 | 0.01 | 2.158 | 10.89 | 1.54 | 3.4 | 96.6 | 0.0 | 1.48 | 1.06 | 0.80 | 0.79 | 2.21 | 4200 | 532 | 2 | 0 | 3 | 0 | 0 | logfile |
✔ | 7T2G | 25612 | 2024-01-17 | 2021-12-04 | 2.5 | 1.71 | — | 1.4 | 0.007 | 0.88 | 0.0 | 0.05 | 12.03 | 0.01 | 2.214 | 13.39 | 1.00 | 3.5 | 96.5 | 0.0 | 0.61 | 0.80 | 0.81 | 5.15 | 1.4 | 0.003 | 0.57 | 0.0 | 0.04 | 14.59 | 0.00 | 2.145 | 11.70 | 2.00 | 2.1 | 97.9 | 0.0 | 0.68 | 0.37 | 0.80 | 0.81 | 4.59 | 6922 | 898 | 4 | 0 | 3 | 8 | 0 | logfile |
✔ | 7oTo | 13063 | 2024-04-07 | 2021-06-10 | 3.4 | 2.27 | — | 1.3 | 0.013 | 1.84 | 0.0 | 0.11 | 15.72 | 0.01 | 1.799 | 3.86 | 0.00 | 1.5 | 98.5 | 0.0 | 2.59 | 0.76 | 0.74 | 1.63 | 1.4 | 0.003 | 0.61 | 0.0 | 0.04 | 17.27 | 0.00 | 1.939 | 7.96 | 2.77 | 2.6 | 97.3 | 0.1 | 1.25 | 0.69 | 0.80 | 0.78 | 1.77 | 10333 | 1313 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8iKJ | 35514 | 2024-04-05 | 2023-02-28 | 3.2 | 2.32 | — | 1.5 | 0.005 | 0.70 | 0.0 | 0.08 | 12.44 | 0.01 | 2.162 | 5.92 | 0.00 | 3.0 | 97.0 | 0.0 | 1.60 | 0.77 | 0.75 | 2.35 | 1.4 | 0.005 | 0.75 | 0.0 | 0.04 | 13.85 | 0.01 | 2.158 | 10.89 | 1.54 | 3.4 | 96.6 | 0.0 | 1.48 | 1.06 | 0.80 | 0.79 | 2.21 | 4200 | 532 | 2 | 0 | 3 | 0 | 0 | logfile |
✔ | 8R5o | 18935 | 2024-04-05 | 2023-11-17 | 2.49 | 2.13 | — | 1.4 | 0.002 | 0.45 | 0.0 | 0.04 | 11.77 | 0.00 | 2.042 | 4.11 | 0.44 | 2.7 | 97.2 | 0.0 | 0.35 | 0.83 | 0.86 | 5.83 | 1.4 | 0.005 | 0.60 | 0.0 | 0.05 | 15.23 | 0.01 | 1.988 | 5.46 | 1.32 | 3.2 | 96.8 | 0.0 | 0.79 | 0.68 | 0.84 | 0.87 | 5.50 | 54473 | 6680 | 41 | 0 | 3 | 255 | 0 | logfile |
✔ | 7T2G | 25612 | 2024-02-13 | 2021-12-04 | 2.5 | 1.71 | — | 1.4 | 0.007 | 0.88 | 0.0 | 0.05 | 12.03 | 0.01 | 2.214 | 13.39 | 1.00 | 3.5 | 96.5 | 0.0 | 0.61 | 0.80 | 0.81 | 5.15 | 1.4 | 0.003 | 0.57 | 0.0 | 0.04 | 14.59 | 0.00 | 2.145 | 11.70 | 2.00 | 2.1 | 97.9 | 0.0 | 0.68 | 0.37 | 0.80 | 0.81 | 4.59 | 6922 | 898 | 4 | 0 | 3 | 8 | 0 | logfile |
✔ | 7RRP | 24665 | 2023-11-18 | 2021-08-10 | 1.27 | 1.32 | — | 1.4 | 0.003 | 0.61 | 0.0 | 0.04 | 14.22 | 0.00 | 2.007 | 2.86 | 0.00 | 2.4 | 97.6 | 0.0 | 4.01 | 0.63 | 0.76 | 9.05 | 1.4 | 0.004 | 0.70 | 0.0 | 0.04 | 14.36 | 0.01 | 2.041 | 1.86 | 0.00 | 1.8 | 98.2 | 0.0 | 3.90 | 0.41 | 0.70 | 0.83 | 9.05 | 72254 | 4128 | 72 | 0 | 278 | 2496 | 34080 | logfile |
✔ | 7RRP | 24665 | 2023-12-12 | 2021-08-10 | 1.27 | 1.32 | — | 1.4 | 0.003 | 0.61 | 0.0 | 0.04 | 14.22 | 0.00 | 2.007 | 2.86 | 0.00 | 2.4 | 97.6 | 0.0 | 4.01 | 0.63 | 0.76 | 9.05 | 1.4 | 0.004 | 0.71 | 0.0 | 0.04 | 14.35 | 0.01 | 2.041 | 1.89 | 0.00 | 1.8 | 98.2 | 0.0 | 3.87 | 0.41 | 0.70 | 0.83 | 9.05 | 72254 | 4128 | 72 | 0 | 278 | 2496 | 34080 | logfile |
✔ | 7oTo | 13063 | 2024-03-15 | 2021-06-10 | 3.4 | 2.27 | — | 1.3 | 0.013 | 1.84 | 0.0 | 0.11 | 15.72 | 0.01 | 1.799 | 3.86 | 0.00 | 1.5 | 98.5 | 0.0 | 2.59 | 0.76 | 0.74 | 1.63 | 1.4 | 0.003 | 0.61 | 0.0 | 0.04 | 17.27 | 0.00 | 1.939 | 7.96 | 2.77 | 2.6 | 97.3 | 0.1 | 1.25 | 0.69 | 0.80 | 0.78 | 1.77 | 10333 | 1313 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7T2G | 25612 | 2024-03-11 | 2021-12-04 | 2.5 | 1.71 | — | 1.4 | 0.007 | 0.88 | 0.0 | 0.05 | 12.03 | 0.01 | 2.214 | 13.39 | 1.00 | 3.5 | 96.5 | 0.0 | 0.61 | 0.80 | 0.81 | 5.15 | 1.4 | 0.003 | 0.57 | 0.0 | 0.04 | 14.59 | 0.00 | 2.145 | 11.70 | 2.00 | 2.1 | 97.9 | 0.0 | 0.68 | 0.37 | 0.80 | 0.81 | 4.59 | 6922 | 898 | 4 | 0 | 3 | 8 | 0 | logfile |
✔ | 7RRP | 24665 | 2023-07-11 | 2021-08-10 | 1.27 | 1.32 | — | 1.4 | 0.003 | 0.61 | 0.0 | 0.04 | 14.22 | 0.00 | 2.007 | 2.86 | 0.00 | 2.4 | 97.6 | 0.0 | 4.01 | 0.63 | 0.76 | 9.05 | 1.4 | 0.004 | 0.70 | 0.0 | 0.04 | 14.36 | 0.01 | 2.041 | 1.86 | 0.00 | 1.8 | 98.2 | 0.0 | 3.90 | 0.41 | 0.70 | 0.83 | 9.05 | 72254 | 4128 | 72 | 0 | 278 | 2496 | 34080 | logfile |
✔ | 7oTo | 13063 | 2024-02-14 | 2021-06-10 | 3.4 | 2.27 | — | 1.3 | 0.013 | 1.84 | 0.0 | 0.11 | 15.72 | 0.01 | 1.799 | 3.86 | 0.00 | 1.5 | 98.5 | 0.0 | 2.59 | 0.76 | 0.74 | 1.63 | 1.4 | 0.003 | 0.61 | 0.0 | 0.04 | 17.27 | 0.00 | 1.939 | 7.96 | 2.77 | 2.6 | 97.3 | 0.1 | 1.25 | 0.69 | 0.80 | 0.78 | 1.77 | 10333 | 1313 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7oTo | 13063 | 2024-01-19 | 2021-06-10 | 3.4 | 2.27 | — | 1.3 | 0.013 | 1.84 | 0.0 | 0.11 | 15.72 | 0.01 | 1.799 | 3.86 | 0.00 | 1.5 | 98.5 | 0.0 | 2.59 | 0.76 | 0.74 | 1.63 | 1.4 | 0.003 | 0.61 | 0.0 | 0.04 | 17.27 | 0.00 | 1.939 | 7.96 | 2.77 | 2.6 | 97.3 | 0.1 | 1.25 | 0.69 | 0.80 | 0.78 | 1.77 | 10333 | 1313 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7RRP | 24665 | 2023-08-17 | 2021-08-10 | 1.27 | 1.32 | — | 1.4 | 0.003 | 0.61 | 0.0 | 0.04 | 14.22 | 0.00 | 2.007 | 2.86 | 0.00 | 2.4 | 97.6 | 0.0 | 4.01 | 0.63 | 0.76 | 9.05 | 1.4 | 0.004 | 0.70 | 0.0 | 0.04 | 14.36 | 0.01 | 2.041 | 1.86 | 0.00 | 1.8 | 98.2 | 0.0 | 3.90 | 0.41 | 0.70 | 0.83 | 9.05 | 72254 | 4128 | 72 | 0 | 278 | 2496 | 34080 | logfile |