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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DRN | 27678 | 2023-09-28 | 2022-07-21 | 4.12 | 4.23 | 4.09 | 4.2 | 0.004 | 0.98 | 0.0 | 0.05 | 15.67 | 0.01 | 2.264 | 18.85 | 0.26 | 6.6 | 93.4 | 0.0 | -2.70 | 0.54 | 0.68 | — | 4.1 | 0.004 | 0.80 | 0.0 | 0.05 | 13.82 | 0.00 | 2.159 | 26.35 | 0.00 | 7.1 | 92.9 | 0.0 | -2.04 | 1.90 | 0.59 | 0.73 | — | 6578 | 811 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 7JMH | 22394 | 2024-04-08 | 2020-07-31 | 4.5 | 5.68 | — | 4.4 | 0.005 | 1.02 | 0.0 | 0.05 | 10.48 | 0.01 | 1.373 | 9.43 | 0.46 | 11.7 | 88.2 | 0.1 | -4.60 | 0.56 | 0.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✘ | 7EYA | 31380 | 2024-03-10 | 2021-05-30 | 3.77 | 3.98 | — | 4.0 | 0.008 | 1.01 | 0.0 | 0.04 | 16.97 | 0.01 | 2.142 | 8.20 | 0.00 | 7.6 | 92.2 | 0.2 | -2.30 | 0.60 | 0.77 | 2.21 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4629 | 576 | 5 | 0 | 3 | 0 | 0 | logfile |
✔ | 8DRN | 27678 | 2024-02-13 | 2022-07-21 | 4.12 | 4.23 | 4.09 | 4.2 | 0.004 | 0.98 | 0.0 | 0.05 | 15.67 | 0.01 | 2.264 | 18.85 | 0.26 | 6.6 | 93.4 | 0.0 | -2.70 | 0.54 | 0.68 | — | 4.1 | 0.003 | 0.77 | 0.0 | 0.05 | 13.56 | 0.00 | 2.180 | 23.60 | 0.00 | 7.6 | 92.4 | 0.0 | -1.85 | 1.54 | 0.59 | 0.73 | — | 6578 | 811 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 7EYA | 31380 | 2024-02-13 | 2021-05-30 | 3.77 | 3.98 | — | 4.0 | 0.008 | 1.01 | 0.0 | 0.04 | 16.97 | 0.01 | 2.142 | 8.20 | 0.00 | 7.6 | 92.2 | 0.2 | -2.30 | 0.60 | 0.77 | 2.21 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4629 | 576 | 5 | 0 | 3 | 0 | 0 | logfile |
✘ | 7EYA | 31380 | 2024-01-17 | 2021-05-30 | 3.77 | 3.98 | — | 4.0 | 0.008 | 1.01 | 0.0 | 0.04 | 16.97 | 0.01 | 2.142 | 8.20 | 0.00 | 7.6 | 92.2 | 0.2 | -2.30 | 0.60 | 0.77 | 2.21 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4629 | 576 | 5 | 0 | 3 | 0 | 0 | logfile |
✔ | 8DRN | 27678 | 2024-01-17 | 2022-07-21 | 4.12 | 4.23 | 4.09 | 4.2 | 0.004 | 0.98 | 0.0 | 0.05 | 15.67 | 0.01 | 2.264 | 18.85 | 0.26 | 6.6 | 93.4 | 0.0 | -2.70 | 0.54 | 0.68 | — | 4.1 | 0.003 | 0.77 | 0.0 | 0.05 | 13.56 | 0.00 | 2.180 | 23.60 | 0.00 | 7.6 | 92.4 | 0.0 | -1.85 | 1.54 | 0.59 | 0.73 | — | 6578 | 811 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N9Q | 24259 | 2023-10-03 | 2021-06-18 | 4.6 | 4.92 | — | 2.3 | 0.002 | 0.88 | 0.0 | 0.00 | 5.65 | 0.00 | 2.600 | 0.00 | 0.00 | 8.9 | 90.3 | 0.8 | -1.59 | 0.79 | 0.69 | — | 2.5 | 0.003 | 1.00 | 0.0 | 0.00 | 5.05 | 0.00 | 2.580 | 6.76 | 0.00 | 12.3 | 86.7 | 0.9 | -4.51 | 2.40 | 0.85 | 0.81 | — | 6945 | 2315 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 7EYA | 31380 | 2024-04-05 | 2021-05-30 | 3.77 | 3.98 | — | 4.0 | 0.008 | 1.01 | 0.0 | 0.04 | 16.97 | 0.01 | 2.142 | 8.20 | 0.00 | 7.6 | 92.2 | 0.2 | -2.30 | 0.60 | 0.77 | 2.21 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4629 | 576 | 5 | 0 | 3 | 0 | 0 | logfile |
✘ | 6VL6 | 21231 | 2023-10-10 | 2020-01-22 | 4.6 | 5.00 | 4.54 | 4.6 | 0.019 | 1.46 | 0.0 | 0.09 | 11.38 | 0.01 | 2.431 | 0.59 | 0.00 | 0.9 | 99.1 | 0.0 | 0.45 | 0.87 | 0.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21504 | 2640 | 24 | 0 | 0 | 0 | 0 | logfile |
✘ | 6VL6 | 21231 | 2023-08-16 | 2020-01-22 | 4.6 | 5.00 | 4.54 | 4.6 | 0.019 | 1.46 | 0.0 | 0.09 | 11.38 | 0.01 | 2.431 | 0.59 | 0.00 | 0.9 | 99.1 | 0.0 | 0.45 | 0.87 | 0.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21504 | 2640 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DRQ | 27681 | 2024-01-17 | 2022-07-21 | 4.16 | 4.28 | 4.60 | 4.1 | 0.004 | 0.89 | 0.0 | 0.05 | 15.60 | 0.01 | 2.283 | 15.85 | 0.00 | 5.9 | 94.1 | 0.0 | -3.30 | 0.39 | 0.56 | — | 4.1 | 0.004 | 0.83 | 0.0 | 0.05 | 13.36 | 0.01 | 2.086 | 24.08 | 0.00 | 7.7 | 92.3 | 0.0 | -2.83 | 1.99 | 0.42 | 0.56 | — | 3321 | 407 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DRN | 27678 | 2024-03-11 | 2022-07-21 | 4.12 | 4.23 | 4.09 | 4.2 | 0.004 | 0.98 | 0.0 | 0.05 | 15.67 | 0.01 | 2.264 | 18.85 | 0.26 | 6.6 | 93.4 | 0.0 | -2.70 | 0.54 | 0.68 | — | 4.1 | 0.003 | 0.77 | 0.0 | 0.05 | 13.56 | 0.00 | 2.180 | 23.60 | 0.00 | 7.6 | 92.4 | 0.0 | -1.85 | 1.54 | 0.59 | 0.73 | — | 6578 | 811 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DRN | 27678 | 2023-08-10 | 2022-07-21 | 4.12 | 4.23 | 4.09 | 4.2 | 0.004 | 0.98 | 0.0 | 0.05 | 15.67 | 0.01 | 2.264 | 18.85 | 0.26 | 6.6 | 93.4 | 0.0 | -2.70 | 0.54 | 0.68 | — | 4.1 | 0.004 | 0.80 | 0.0 | 0.05 | 13.82 | 0.00 | 2.159 | 26.35 | 0.00 | 7.1 | 92.9 | 0.0 | -2.04 | 1.90 | 0.59 | 0.73 | — | 6578 | 811 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DRN | 27678 | 2023-07-04 | 2022-07-21 | 4.12 | 4.23 | 4.09 | 4.2 | 0.004 | 0.98 | 0.0 | 0.05 | 15.67 | 0.01 | 2.264 | 18.85 | 0.26 | 6.6 | 93.4 | 0.0 | -2.70 | 0.54 | 0.68 | — | 4.1 | 0.004 | 0.80 | 0.0 | 0.05 | 13.82 | 0.00 | 2.159 | 26.35 | 0.00 | 7.1 | 92.9 | 0.0 | -2.04 | 1.90 | 0.59 | 0.73 | — | 6578 | 811 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N9Q | 24259 | 2023-09-28 | 2021-06-18 | 4.6 | 4.92 | — | 2.3 | 0.002 | 0.88 | 0.0 | 0.00 | 5.65 | 0.00 | 2.600 | 0.00 | 0.00 | 8.9 | 90.3 | 0.8 | -1.59 | 0.79 | 0.69 | — | 2.5 | 0.003 | 1.00 | 0.0 | 0.00 | 5.05 | 0.00 | 2.580 | 6.76 | 0.00 | 12.3 | 86.7 | 0.9 | -4.51 | 2.40 | 0.85 | 0.81 | — | 6945 | 2315 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DRN | 27678 | 2024-04-06 | 2022-07-21 | 4.12 | 4.23 | 4.09 | 4.2 | 0.004 | 0.98 | 0.0 | 0.05 | 15.67 | 0.01 | 2.264 | 18.85 | 0.26 | 6.6 | 93.4 | 0.0 | -2.70 | 0.54 | 0.68 | — | 4.1 | 0.003 | 0.77 | 0.0 | 0.05 | 13.56 | 0.00 | 2.180 | 23.60 | 0.00 | 7.6 | 92.4 | 0.0 | -1.85 | 1.54 | 0.59 | 0.73 | — | 6578 | 811 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8F7D | 28903 | 2024-02-13 | 2022-11-18 | 4.2 | 4.28 | 4.25 | 4.2 | 0.005 | 1.00 | 0.0 | 0.05 | 15.55 | 0.01 | 2.264 | 19.74 | 0.53 | 6.7 | 93.3 | 0.0 | -2.71 | 0.60 | 0.60 | — | 4.2 | 0.003 | 0.81 | 0.0 | 0.05 | 13.45 | 0.00 | 2.149 | 23.01 | 0.00 | 5.9 | 94.1 | 0.0 | -2.78 | 1.95 | 0.65 | 0.68 | — | 6578 | 811 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DRo | 27679 | 2023-07-04 | 2022-07-21 | 4.06 | 4.13 | 4.38 | 4.1 | 0.004 | 0.96 | 0.0 | 0.05 | 15.27 | 0.01 | 2.265 | 14.83 | 0.40 | 7.3 | 92.7 | 0.0 | -3.39 | 0.46 | 0.53 | — | 4.1 | 0.003 | 0.83 | 0.0 | 0.05 | 13.69 | 0.01 | 2.116 | 23.12 | 0.00 | 9.9 | 90.1 | 0.0 | -2.68 | 2.67 | 0.46 | 0.53 | — | 6642 | 814 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DRo | 27679 | 2024-04-06 | 2022-07-21 | 4.06 | 4.13 | 4.38 | 4.1 | 0.004 | 0.96 | 0.0 | 0.05 | 15.27 | 0.01 | 2.265 | 14.83 | 0.40 | 7.3 | 92.7 | 0.0 | -3.39 | 0.46 | 0.53 | — | 4.1 | 0.003 | 0.79 | 0.0 | 0.04 | 13.73 | 0.01 | 2.171 | 19.16 | 0.00 | 9.0 | 91.0 | 0.0 | -2.44 | 2.62 | 0.45 | 0.51 | — | 6642 | 814 | 2 | 0 | 0 | 0 | 0 | logfile |