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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7RX5 | 24725 | 2023-09-29 | 2021-08-21 | 3.4 | 3.65 | — | 3.6 | 0.002 | 0.25 | 0.0 | 0.03 | 11.98 | 0.00 | 2.288 | 5.05 | 0.00 | 0.0 | 100.0 | 0.0 | 4.54 | 0.70 | 0.85 | 3.58 | 3.6 | 0.003 | 0.35 | 0.0 | 0.03 | 13.46 | 0.00 | 2.257 | 6.36 | 0.00 | 0.0 | 100.0 | 0.0 | 5.01 | 0.27 | 0.71 | 0.88 | 2.75 | 9120 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RX5 | 24725 | 2024-01-18 | 2021-08-21 | 3.4 | 3.65 | — | 3.6 | 0.002 | 0.25 | 0.0 | 0.03 | 11.98 | 0.00 | 2.288 | 5.05 | 0.00 | 0.0 | 100.0 | 0.0 | 4.54 | 0.70 | 0.85 | 3.58 | 3.6 | 0.002 | 0.33 | 0.0 | 0.03 | 13.43 | 0.00 | 2.264 | 5.87 | 0.00 | 0.0 | 100.0 | 0.0 | 5.24 | 0.23 | 0.71 | 0.87 | 2.92 | 9120 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RX5 | 24725 | 2024-03-14 | 2021-08-21 | 3.4 | 3.65 | — | 3.6 | 0.002 | 0.25 | 0.0 | 0.03 | 11.98 | 0.00 | 2.288 | 5.05 | 0.00 | 0.0 | 100.0 | 0.0 | 4.54 | 0.70 | 0.85 | 3.58 | 3.6 | 0.002 | 0.33 | 0.0 | 0.03 | 13.43 | 0.00 | 2.264 | 5.87 | 0.00 | 0.0 | 100.0 | 0.0 | 5.24 | 0.23 | 0.71 | 0.87 | 2.92 | 9120 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RX5 | 24725 | 2024-04-06 | 2021-08-21 | 3.4 | 3.65 | — | 3.6 | 0.002 | 0.25 | 0.0 | 0.03 | 11.98 | 0.00 | 2.288 | 5.05 | 0.00 | 0.0 | 100.0 | 0.0 | 4.54 | 0.70 | 0.85 | 3.58 | 3.6 | 0.002 | 0.33 | 0.0 | 0.03 | 13.43 | 0.00 | 2.264 | 5.87 | 0.00 | 0.0 | 100.0 | 0.0 | 5.24 | 0.23 | 0.71 | 0.87 | 2.92 | 9120 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RX5 | 24725 | 2023-11-14 | 2021-08-21 | 3.4 | 3.65 | — | 3.6 | 0.002 | 0.25 | 0.0 | 0.03 | 11.98 | 0.00 | 2.288 | 5.05 | 0.00 | 0.0 | 100.0 | 0.0 | 4.54 | 0.70 | 0.85 | 3.58 | 3.6 | 0.003 | 0.35 | 0.0 | 0.03 | 13.46 | 0.00 | 2.257 | 6.36 | 0.00 | 0.0 | 100.0 | 0.0 | 5.01 | 0.27 | 0.71 | 0.88 | 2.75 | 9120 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RX5 | 24725 | 2024-02-14 | 2021-08-21 | 3.4 | 3.65 | — | 3.6 | 0.002 | 0.25 | 0.0 | 0.03 | 11.98 | 0.00 | 2.288 | 5.05 | 0.00 | 0.0 | 100.0 | 0.0 | 4.54 | 0.70 | 0.85 | 3.58 | 3.6 | 0.002 | 0.33 | 0.0 | 0.03 | 13.43 | 0.00 | 2.264 | 5.87 | 0.00 | 0.0 | 100.0 | 0.0 | 5.24 | 0.23 | 0.71 | 0.87 | 2.92 | 9120 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RX5 | 24725 | 2023-10-04 | 2021-08-21 | 3.4 | 3.65 | — | 3.6 | 0.002 | 0.25 | 0.0 | 0.03 | 11.98 | 0.00 | 2.288 | 5.05 | 0.00 | 0.0 | 100.0 | 0.0 | 4.54 | 0.70 | 0.85 | 3.58 | 3.6 | 0.003 | 0.35 | 0.0 | 0.03 | 13.46 | 0.00 | 2.257 | 6.36 | 0.00 | 0.0 | 100.0 | 0.0 | 5.01 | 0.27 | 0.71 | 0.88 | 2.75 | 9120 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RX5 | 24725 | 2023-08-11 | 2021-08-21 | 3.4 | 3.65 | — | 3.6 | 0.002 | 0.25 | 0.0 | 0.03 | 11.98 | 0.00 | 2.288 | 5.05 | 0.00 | 0.0 | 100.0 | 0.0 | 4.54 | 0.70 | 0.85 | 3.58 | 3.6 | 0.003 | 0.35 | 0.0 | 0.03 | 13.46 | 0.00 | 2.257 | 6.36 | 0.00 | 0.0 | 100.0 | 0.0 | 5.01 | 0.27 | 0.71 | 0.88 | 2.75 | 9120 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oHD | 16880 | 2024-03-23 | 2023-03-21 | 3.1 | 3.56 | 3.03 | 3.2 | 0.001 | 0.31 | 0.0 | 0.03 | 21.90 | 0.00 | 1.823 | 2.53 | 0.46 | 1.7 | 98.3 | 0.0 | 2.80 | 0.90 | 0.91 | 3.55 | 3.2 | 0.004 | 0.49 | 0.0 | 0.03 | 21.88 | 0.00 | 1.835 | 5.53 | 1.61 | 2.3 | 97.6 | 0.0 | 1.60 | 0.29 | 0.90 | 0.93 | 3.68 | 146745 | 8224 | 62 | 3742 | 225 | 0 | 0 | logfile |
✔ | 8CWY | 27031 | 2024-02-24 | 2022-05-19 | 3.34 | 3.58 | 3.35 | 3.6 | 0.002 | 0.32 | 0.0 | 0.03 | 8.10 | 0.00 | 2.026 | 6.16 | 0.02 | 0.8 | 99.2 | 0.0 | 5.71 | 0.53 | 0.63 | 1.88 | 3.6 | 0.003 | 0.42 | 0.0 | 0.03 | 11.83 | 0.00 | 2.268 | 6.08 | 0.91 | 0.6 | 99.4 | 0.0 | 6.58 | 1.16 | 0.56 | 0.74 | 1.33 | 43620 | 6300 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CWY | 27031 | 2024-03-24 | 2022-05-19 | 3.34 | 3.58 | 3.35 | 3.6 | 0.002 | 0.32 | 0.0 | 0.03 | 8.10 | 0.00 | 2.026 | 6.16 | 0.02 | 0.8 | 99.2 | 0.0 | 5.71 | 0.53 | 0.63 | 1.88 | 3.6 | 0.003 | 0.42 | 0.0 | 0.03 | 11.83 | 0.00 | 2.268 | 6.08 | 0.91 | 0.6 | 99.4 | 0.0 | 6.58 | 1.16 | 0.56 | 0.74 | 1.33 | 43620 | 6300 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PHP | 17670 | 2024-02-24 | 2023-06-20 | 2.56 | 2.99 | 2.40 | 2.8 | 0.001 | 0.32 | 0.0 | 0.04 | 12.91 | 0.00 | 2.357 | 1.69 | 0.00 | 1.5 | 98.5 | 0.0 | 1.55 | 0.77 | 0.89 | 3.59 | 2.8 | 0.003 | 0.56 | 0.0 | 0.04 | 15.67 | 0.00 | 2.173 | 6.09 | 1.71 | 2.0 | 98.0 | 0.0 | 1.80 | 1.35 | 0.76 | 0.91 | 3.20 | 40812 | 4968 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZT | 24777 | 2024-02-13 | 2021-08-27 | 2.35 | 2.27 | — | 2.1 | 0.005 | 0.32 | 0.0 | 0.03 | 14.89 | 0.00 | 2.388 | 3.83 | 0.00 | 2.9 | 97.1 | 0.0 | 2.81 | 0.77 | 0.79 | 2.62 | 2.0 | 0.003 | 0.32 | 0.0 | 0.03 | 15.53 | 0.00 | 2.337 | 5.44 | 0.35 | 0.0 | 100.0 | 0.0 | 6.28 | 0.23 | 0.80 | 0.83 | 2.93 | 2451 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZT | 24777 | 2024-03-10 | 2021-08-27 | 2.35 | 2.27 | — | 2.1 | 0.005 | 0.32 | 0.0 | 0.03 | 14.89 | 0.00 | 2.388 | 3.83 | 0.00 | 2.9 | 97.1 | 0.0 | 2.81 | 0.77 | 0.79 | 2.62 | 2.0 | 0.003 | 0.32 | 0.0 | 0.03 | 15.53 | 0.00 | 2.337 | 5.44 | 0.35 | 0.0 | 100.0 | 0.0 | 6.28 | 0.23 | 0.80 | 0.83 | 2.93 | 2451 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PHP | 17670 | 2023-10-19 | 2023-06-20 | 2.56 | 2.99 | 2.40 | 2.8 | 0.001 | 0.32 | 0.0 | 0.04 | 12.91 | 0.00 | 2.357 | 1.69 | 0.00 | 1.5 | 98.5 | 0.0 | 1.55 | 0.77 | 0.89 | 3.59 | 2.8 | 0.002 | 0.51 | 0.0 | 0.04 | 15.75 | 0.00 | 2.185 | 6.11 | 1.09 | 1.9 | 98.1 | 0.0 | 2.08 | 1.36 | 0.75 | 0.90 | 2.84 | 40812 | 4968 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G2X | 3331 | 2024-03-17 | 2016-04-16 | 3.8 | 3.49 | — | 3.4 | 0.001 | 0.32 | 0.0 | 0.02 | 21.03 | 0.00 | 2.219 | 4.36 | 0.45 | 19.7 | 74.4 | 5.9 | -5.72 | 0.51 | 0.30 | -0.09 | 3.3 | 0.007 | 1.02 | 0.0 | 0.05 | 25.19 | 0.01 | 1.900 | 45.40 | 4.54 | 22.7 | 76.1 | 1.3 | -5.20 | 2.37 | 0.80 | 0.67 | 0.25 | 19072 | 487 | 3 | 704 | 0 | 0 | 0 | logfile |
✔ | 5G2X | 3331 | 2024-02-17 | 2016-04-16 | 3.8 | 3.49 | — | 3.4 | 0.001 | 0.32 | 0.0 | 0.02 | 21.03 | 0.00 | 2.219 | 4.36 | 0.45 | 19.7 | 74.4 | 5.9 | -5.72 | 0.51 | 0.30 | -0.09 | 3.3 | 0.007 | 1.02 | 0.0 | 0.05 | 25.19 | 0.01 | 1.900 | 45.40 | 4.54 | 22.7 | 76.1 | 1.3 | -5.20 | 2.37 | 0.80 | 0.67 | 0.25 | 19072 | 487 | 3 | 704 | 0 | 0 | 0 | logfile |
✔ | 8PHP | 17670 | 2023-08-25 | 2023-06-20 | 2.56 | 2.99 | 2.40 | 2.8 | 0.001 | 0.32 | 0.0 | 0.04 | 12.91 | 0.00 | 2.357 | 1.69 | 0.00 | 1.5 | 98.5 | 0.0 | 1.55 | 0.77 | 0.89 | 3.59 | 2.8 | 0.002 | 0.51 | 0.0 | 0.04 | 15.75 | 0.00 | 2.185 | 6.11 | 1.09 | 1.9 | 98.1 | 0.0 | 2.08 | 1.36 | 0.75 | 0.90 | 2.84 | 40812 | 4968 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G2X | 3331 | 2023-08-15 | 2016-04-16 | 3.8 | 3.49 | — | 3.4 | 0.001 | 0.32 | 0.0 | 0.02 | 11.56 | 0.00 | 2.219 | 4.36 | 0.45 | 19.7 | 74.4 | 5.9 | -5.72 | 0.51 | 0.30 | -0.09 | 3.3 | 0.005 | 0.87 | 0.0 | 0.04 | 19.17 | 0.01 | 1.949 | 36.81 | 0.45 | 21.6 | 77.1 | 1.3 | -5.19 | 1.94 | 0.80 | 0.66 | 0.50 | 19072 | 487 | 3 | 704 | 0 | 0 | 0 | logfile |
✔ | 5G2X | 3331 | 2023-07-09 | 2016-04-16 | 3.8 | 3.49 | — | 3.4 | 0.001 | 0.32 | 0.0 | 0.02 | 11.56 | 0.00 | 2.219 | 4.36 | 0.45 | 19.7 | 74.4 | 5.9 | -5.72 | 0.51 | 0.30 | -0.09 | 3.3 | 0.005 | 0.87 | 0.0 | 0.04 | 19.17 | 0.01 | 1.949 | 36.81 | 0.45 | 21.6 | 77.1 | 1.3 | -5.19 | 1.94 | 0.80 | 0.66 | 0.50 | 19072 | 487 | 3 | 704 | 0 | 0 | 0 | logfile |