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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6RJU | 4906 | 2024-02-13 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 3.9 | 0.003 | 0.66 | 0.0 | 0.03 | 15.97 | 0.00 | 2.278 | 7.54 | 1.01 | 7.0 | 93.0 | 0.0 | -0.88 | 1.30 | 0.30 | 0.04 | 1.02 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 6RJU | 4906 | 2023-12-07 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 3.9 | 0.003 | 0.71 | 0.0 | 0.03 | 16.08 | 0.00 | 2.061 | 8.55 | 1.01 | 6.2 | 93.8 | 0.0 | -1.13 | 1.35 | 0.28 | 0.06 | -0.23 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 6RJU | 4906 | 2023-08-09 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 9.8 | 0.003 | 0.63 | 0.0 | 0.03 | 15.97 | 0.00 | 2.424 | 6.03 | 0.00 | 6.2 | 93.8 | 0.0 | -0.13 | 1.31 | 0.27 | 0.05 | 0.48 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 6RJU | 4906 | 2023-09-27 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 9.8 | 0.003 | 0.63 | 0.0 | 0.03 | 15.97 | 0.00 | 2.424 | 6.03 | 0.00 | 6.2 | 93.8 | 0.0 | -0.13 | 1.31 | 0.27 | 0.05 | 0.48 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 6RJU | 4906 | 2023-10-02 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 9.8 | 0.003 | 0.63 | 0.0 | 0.03 | 15.97 | 0.00 | 2.424 | 6.03 | 0.00 | 6.2 | 93.8 | 0.0 | -0.13 | 1.31 | 0.27 | 0.05 | 0.48 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 6RJU | 4906 | 2024-03-10 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 3.9 | 0.003 | 0.66 | 0.0 | 0.03 | 15.97 | 0.00 | 2.278 | 7.54 | 1.01 | 7.0 | 93.0 | 0.0 | -0.88 | 1.30 | 0.30 | 0.04 | 1.02 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 6RJU | 4906 | 2024-04-05 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 3.9 | 0.003 | 0.66 | 0.0 | 0.03 | 15.97 | 0.00 | 2.278 | 7.54 | 1.01 | 7.0 | 93.0 | 0.0 | -0.88 | 1.30 | 0.30 | 0.04 | 1.02 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 6RJU | 4906 | 2024-01-17 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 3.9 | 0.003 | 0.72 | 0.0 | 0.03 | 15.77 | 0.00 | 2.078 | 9.55 | 2.02 | 7.0 | 93.0 | 0.0 | -1.27 | 1.29 | 0.30 | 0.05 | 1.45 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 6RJU | 4906 | 2023-07-03 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 9.8 | 0.003 | 0.63 | 0.0 | 0.03 | 15.97 | 0.00 | 2.424 | 6.03 | 0.00 | 6.2 | 93.8 | 0.0 | -0.13 | 1.31 | 0.27 | 0.05 | 0.48 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 6RJU | 4906 | 2023-11-13 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 9.8 | 0.003 | 0.63 | 0.0 | 0.03 | 15.97 | 0.00 | 2.424 | 6.03 | 0.00 | 6.2 | 93.8 | 0.0 | -0.13 | 1.31 | 0.27 | 0.05 | 0.48 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 8iEN | 35387 | 2024-03-11 | 2023-02-15 | 3.25 | 3.66 | 3.30 | 7.2 | 0.004 | 1.21 | 0.0 | 0.04 | 14.04 | 0.00 | 2.168 | 8.43 | 0.24 | 5.0 | 94.9 | 0.1 | -2.18 | 0.18 | 0.00 | -0.05 | 3.5 | 0.003 | 1.04 | 0.0 | 0.04 | 16.13 | 0.01 | 2.094 | 16.86 | 1.18 | 8.4 | 91.6 | 0.0 | -1.45 | 1.69 | 0.35 | 0.28 | 0.69 | 7678 | 991 | 2 | 0 | 4 | 0 | 0 | logfile |
✔ | 8iEN | 35387 | 2024-01-18 | 2023-02-15 | 3.25 | 3.66 | 3.30 | 7.2 | 0.004 | 1.21 | 0.0 | 0.04 | 14.04 | 0.00 | 2.168 | 8.43 | 0.24 | 5.0 | 94.9 | 0.1 | -2.18 | 0.18 | 0.00 | -0.05 | 3.5 | 0.003 | 1.04 | 0.0 | 0.04 | 16.13 | 0.01 | 2.094 | 16.86 | 1.18 | 8.4 | 91.6 | 0.0 | -1.45 | 1.69 | 0.35 | 0.28 | 0.69 | 7678 | 991 | 2 | 0 | 4 | 0 | 0 | logfile |
✔ | 8iEN | 35387 | 2024-02-13 | 2023-02-15 | 3.25 | 3.66 | 3.30 | 7.2 | 0.004 | 1.21 | 0.0 | 0.04 | 14.04 | 0.00 | 2.168 | 8.43 | 0.24 | 5.0 | 94.9 | 0.1 | -2.18 | 0.18 | 0.00 | -0.05 | 3.5 | 0.003 | 1.04 | 0.0 | 0.04 | 16.13 | 0.01 | 2.094 | 16.86 | 1.18 | 8.4 | 91.6 | 0.0 | -1.45 | 1.69 | 0.35 | 0.28 | 0.69 | 7678 | 991 | 2 | 0 | 4 | 0 | 0 | logfile |
✔ | 8iEN | 35387 | 2024-04-06 | 2023-02-15 | 3.25 | 3.66 | 3.30 | 7.2 | 0.004 | 1.21 | 0.0 | 0.04 | 14.04 | 0.00 | 2.168 | 8.43 | 0.24 | 5.0 | 94.9 | 0.1 | -2.18 | 0.18 | 0.00 | -0.05 | 3.5 | 0.003 | 1.04 | 0.0 | 0.04 | 16.13 | 0.01 | 2.094 | 16.86 | 1.18 | 8.4 | 91.6 | 0.0 | -1.45 | 1.69 | 0.35 | 0.28 | 0.69 | 7678 | 991 | 2 | 0 | 4 | 0 | 0 | logfile |
✔ | 8J5Y | 33733 | 2024-02-15 | 2023-04-24 | 3.07 | 3.50 | 3.24 | 20.0 | 0.004 | 0.84 | 0.0 | 0.05 | 13.88 | 0.01 | 2.153 | 12.97 | 0.00 | 6.0 | 93.7 | 0.3 | -1.55 | 0.08 | 0.00 | 0.39 | 3.4 | 0.003 | 0.74 | 0.0 | 0.04 | 15.95 | 0.00 | 2.112 | 15.74 | 2.42 | 7.6 | 92.3 | 0.1 | -1.26 | 1.56 | 0.12 | 0.06 | 0.26 | 10905 | 1389 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GYL | 0091 | 2024-04-17 | 2018-06-30 | 4.8 | 4.06 | 4.25 | 12.0 | 0.008 | 0.47 | 0.0 | 0.04 | 11.78 | 0.00 | 0.860 | 9.27 | 0.16 | 6.2 | 92.8 | 1.0 | -3.33 | 0.32 | 0.00 | — | 3.5 | 0.003 | 0.80 | 0.0 | 0.05 | 14.75 | 0.01 | 2.093 | 18.95 | 0.00 | 5.4 | 94.4 | 0.3 | -1.55 | 1.31 | 0.51 | 0.19 | — | 43409 | 5250 | 30 | 112 | 11 | 0 | 0 | logfile |
✘ | 6MiX | 9132 | 2023-07-18 | 2018-09-20 | 3.6 | 4.57 | — | 14.0 | 0.007 | 1.19 | 0.0 | 0.07 | 16.40 | 0.01 | 2.212 | 9.79 | 2.30 | 14.6 | 85.0 | 0.4 | -5.69 | -0.03 | 0.00 | 0.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 43120 | 5348 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GYL | 0091 | 2023-07-18 | 2018-06-30 | 4.8 | 4.06 | 4.25 | 12.0 | 0.008 | 0.47 | 0.0 | 0.04 | 11.68 | 0.00 | 0.860 | 9.27 | 0.16 | 6.2 | 92.8 | 1.0 | -3.33 | 0.32 | 0.00 | — | 3.4 | 0.003 | 0.78 | 0.0 | 0.04 | 14.55 | 0.01 | 2.062 | 20.07 | 0.00 | 6.0 | 93.7 | 0.2 | -1.26 | 1.24 | 0.50 | 0.18 | — | 43409 | 5250 | 30 | 112 | 11 | 0 | 0 | logfile |
✔ | 6GYL | 0091 | 2023-08-25 | 2018-06-30 | 4.8 | 4.06 | 4.25 | 12.0 | 0.008 | 0.47 | 0.0 | 0.04 | 11.68 | 0.00 | 0.860 | 9.27 | 0.16 | 6.2 | 92.8 | 1.0 | -3.33 | 0.32 | 0.00 | — | 3.4 | 0.003 | 0.78 | 0.0 | 0.04 | 14.55 | 0.01 | 2.062 | 20.07 | 0.00 | 6.0 | 93.7 | 0.2 | -1.26 | 1.24 | 0.50 | 0.18 | — | 43409 | 5250 | 30 | 112 | 11 | 0 | 0 | logfile |
✔ | 6GYL | 0091 | 2024-03-24 | 2018-06-30 | 4.8 | 4.06 | 4.25 | 12.0 | 0.008 | 0.47 | 0.0 | 0.04 | 11.78 | 0.00 | 0.860 | 9.27 | 0.16 | 6.2 | 92.8 | 1.0 | -3.33 | 0.32 | 0.00 | — | 3.5 | 0.003 | 0.80 | 0.0 | 0.05 | 14.75 | 0.01 | 2.093 | 18.95 | 0.00 | 5.4 | 94.4 | 0.3 | -1.55 | 1.31 | 0.51 | 0.19 | — | 43409 | 5250 | 30 | 112 | 11 | 0 | 0 | logfile |