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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6GJ3 | 0010 | 2024-04-09 | 2018-05-15 | 4.3 | 4.02 | — | 3.9 | 0.008 | 1.19 | 0.0 | 0.06 | 10.34 | 0.01 | 2.248 | 5.14 | 0.37 | 13.5 | 86.2 | 0.3 | -4.76 | 0.71 | 0.78 | — | 3.9 | 0.003 | 0.71 | 0.0 | 0.04 | 12.15 | 0.01 | 2.272 | 9.39 | 0.00 | 9.3 | 90.7 | 0.0 | -1.52 | 0.73 | 0.71 | 0.77 | — | 17405 | 2194 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GJ3 | 0010 | 2023-07-08 | 2018-05-15 | 4.3 | 4.02 | — | 3.9 | 0.008 | 1.19 | 0.0 | 0.06 | 10.34 | 0.01 | 2.248 | 5.14 | 0.37 | 13.5 | 86.2 | 0.3 | -4.76 | 0.71 | 0.78 | — | 3.9 | 0.003 | 0.73 | 0.0 | 0.04 | 12.36 | 0.01 | 2.209 | 10.28 | 0.00 | 10.8 | 89.2 | 0.0 | -1.74 | 0.76 | 0.71 | 0.78 | — | 17405 | 2194 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GJ3 | 0010 | 2024-02-17 | 2018-05-15 | 4.3 | 4.02 | — | 3.9 | 0.008 | 1.19 | 0.0 | 0.06 | 10.34 | 0.01 | 2.248 | 5.14 | 0.37 | 13.5 | 86.2 | 0.3 | -4.76 | 0.71 | 0.78 | — | 3.9 | 0.003 | 0.71 | 0.0 | 0.04 | 12.15 | 0.01 | 2.272 | 9.39 | 0.00 | 9.3 | 90.7 | 0.0 | -1.52 | 0.73 | 0.71 | 0.77 | — | 17405 | 2194 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GJ3 | 0010 | 2023-11-17 | 2018-05-15 | 4.3 | 4.02 | — | 3.9 | 0.008 | 1.19 | 0.0 | 0.06 | 10.34 | 0.01 | 2.248 | 5.14 | 0.37 | 13.5 | 86.2 | 0.3 | -4.76 | 0.71 | 0.78 | — | 3.9 | 0.003 | 0.73 | 0.0 | 0.04 | 12.36 | 0.01 | 2.209 | 10.28 | 0.00 | 10.8 | 89.2 | 0.0 | -1.74 | 0.76 | 0.71 | 0.78 | — | 17405 | 2194 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GJ3 | 0010 | 2024-03-17 | 2018-05-15 | 4.3 | 4.02 | — | 3.9 | 0.008 | 1.19 | 0.0 | 0.06 | 10.34 | 0.01 | 2.248 | 5.14 | 0.37 | 13.5 | 86.2 | 0.3 | -4.76 | 0.71 | 0.78 | — | 3.9 | 0.003 | 0.71 | 0.0 | 0.04 | 12.15 | 0.01 | 2.272 | 9.39 | 0.00 | 9.3 | 90.7 | 0.0 | -1.52 | 0.73 | 0.71 | 0.77 | — | 17405 | 2194 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GJ3 | 0010 | 2023-08-15 | 2018-05-15 | 4.3 | 4.02 | — | 3.9 | 0.008 | 1.19 | 0.0 | 0.06 | 10.34 | 0.01 | 2.248 | 5.14 | 0.37 | 13.5 | 86.2 | 0.3 | -4.76 | 0.71 | 0.78 | — | 3.9 | 0.003 | 0.73 | 0.0 | 0.04 | 12.36 | 0.01 | 2.209 | 10.28 | 0.00 | 10.8 | 89.2 | 0.0 | -1.74 | 0.76 | 0.71 | 0.78 | — | 17405 | 2194 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GJ3 | 0010 | 2023-10-08 | 2018-05-15 | 4.3 | 4.02 | — | 3.9 | 0.008 | 1.19 | 0.0 | 0.06 | 10.34 | 0.01 | 2.248 | 5.14 | 0.37 | 13.5 | 86.2 | 0.3 | -4.76 | 0.71 | 0.78 | — | 3.9 | 0.003 | 0.73 | 0.0 | 0.04 | 12.36 | 0.01 | 2.209 | 10.28 | 0.00 | 10.8 | 89.2 | 0.0 | -1.74 | 0.76 | 0.71 | 0.78 | — | 17405 | 2194 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GJZ | 0012 | 2023-11-15 | 2018-05-17 | 4.06 | 4.32 | 3.49 | 4.1 | 0.011 | 1.11 | 0.0 | 0.05 | 10.30 | 0.01 | 2.008 | 13.98 | 0.00 | 10.8 | 88.9 | 0.3 | -4.09 | 0.66 | 0.79 | — | 4.1 | 0.004 | 0.81 | 0.0 | 0.04 | 12.00 | 0.00 | 1.986 | 33.37 | 0.00 | 12.2 | 87.7 | 0.1 | -1.11 | 1.51 | 0.67 | 0.80 | — | 10503 | 682 | 4 | 28 | 2 | 0 | 4402 | logfile |
✔ | 6GJZ | 0012 | 2023-12-09 | 2018-05-17 | 4.06 | 4.32 | 3.49 | 4.1 | 0.011 | 1.11 | 0.0 | 0.05 | 14.16 | 0.01 | 2.008 | 13.98 | 0.00 | 10.8 | 88.9 | 0.3 | -4.09 | 0.66 | 0.79 | — | 4.1 | 0.003 | 0.75 | 0.0 | 0.04 | 14.43 | 0.00 | 2.031 | 26.13 | 0.00 | 9.9 | 89.9 | 0.1 | -0.44 | 1.49 | 0.67 | 0.80 | — | 10503 | 682 | 4 | 28 | 2 | 0 | 4402 | logfile |
✔ | 6GJZ | 0012 | 2023-09-30 | 2018-05-17 | 4.06 | 4.32 | 3.49 | 4.1 | 0.011 | 1.11 | 0.0 | 0.05 | 10.30 | 0.01 | 2.008 | 13.98 | 0.00 | 10.8 | 88.9 | 0.3 | -4.09 | 0.66 | 0.79 | — | 4.1 | 0.004 | 0.81 | 0.0 | 0.04 | 12.00 | 0.00 | 1.986 | 33.37 | 0.00 | 12.2 | 87.7 | 0.1 | -1.11 | 1.51 | 0.67 | 0.80 | — | 10503 | 682 | 4 | 28 | 2 | 0 | 4402 | logfile |
✔ | 6GJZ | 0012 | 2024-03-15 | 2018-05-17 | 4.06 | 4.32 | 3.49 | 4.1 | 0.011 | 1.11 | 0.0 | 0.05 | 14.45 | 0.01 | 2.008 | 13.98 | 0.00 | 10.8 | 88.9 | 0.3 | -4.09 | 0.66 | 0.79 | — | 4.1 | 0.004 | 0.78 | 0.0 | 0.04 | 14.84 | 0.00 | 2.008 | 29.30 | 0.00 | 11.3 | 88.6 | 0.1 | -0.62 | 1.50 | 0.67 | 0.80 | — | 10503 | 682 | 4 | 28 | 2 | 0 | 4402 | logfile |
✔ | 6GJZ | 0012 | 2024-02-14 | 2018-05-17 | 4.06 | 4.32 | 3.49 | 4.1 | 0.011 | 1.11 | 0.0 | 0.05 | 14.45 | 0.01 | 2.008 | 13.98 | 0.00 | 10.8 | 88.9 | 0.3 | -4.09 | 0.66 | 0.79 | — | 4.1 | 0.004 | 0.78 | 0.0 | 0.04 | 14.84 | 0.00 | 2.008 | 29.30 | 0.00 | 11.3 | 88.6 | 0.1 | -0.62 | 1.50 | 0.67 | 0.80 | — | 10503 | 682 | 4 | 28 | 2 | 0 | 4402 | logfile |
✔ | 6GJZ | 0012 | 2023-10-05 | 2018-05-17 | 4.06 | 4.32 | 3.49 | 4.1 | 0.011 | 1.11 | 0.0 | 0.05 | 10.30 | 0.01 | 2.008 | 13.98 | 0.00 | 10.8 | 88.9 | 0.3 | -4.09 | 0.66 | 0.79 | — | 4.1 | 0.004 | 0.81 | 0.0 | 0.04 | 12.00 | 0.00 | 1.986 | 33.37 | 0.00 | 12.2 | 87.7 | 0.1 | -1.11 | 1.51 | 0.67 | 0.80 | — | 10503 | 682 | 4 | 28 | 2 | 0 | 4402 | logfile |
✔ | 6GJZ | 0012 | 2024-04-07 | 2018-05-17 | 4.06 | 4.32 | 3.49 | 4.1 | 0.011 | 1.11 | 0.0 | 0.05 | 14.45 | 0.01 | 2.008 | 13.98 | 0.00 | 10.8 | 88.9 | 0.3 | -4.09 | 0.66 | 0.79 | — | 4.1 | 0.004 | 0.78 | 0.0 | 0.04 | 14.84 | 0.00 | 2.008 | 29.30 | 0.00 | 11.3 | 88.6 | 0.1 | -0.62 | 1.50 | 0.67 | 0.80 | — | 10503 | 682 | 4 | 28 | 2 | 0 | 4402 | logfile |
✔ | 6GJZ | 0012 | 2023-08-11 | 2018-05-17 | 4.06 | 4.32 | 3.49 | 4.1 | 0.011 | 1.11 | 0.0 | 0.05 | 10.30 | 0.01 | 2.008 | 13.98 | 0.00 | 10.8 | 88.9 | 0.3 | -4.09 | 0.66 | 0.79 | — | 4.1 | 0.003 | 0.75 | 0.0 | 0.04 | 11.94 | 0.00 | 2.003 | 28.55 | 0.00 | 10.8 | 89.2 | 0.0 | -0.73 | 1.52 | 0.67 | 0.80 | — | 10503 | 682 | 4 | 28 | 2 | 0 | 4402 | logfile |
✔ | 6GJZ | 0012 | 2024-01-19 | 2018-05-17 | 4.06 | 4.32 | 3.49 | 4.1 | 0.011 | 1.11 | 0.0 | 0.05 | 14.16 | 0.01 | 2.008 | 13.98 | 0.00 | 10.8 | 88.9 | 0.3 | -4.09 | 0.66 | 0.79 | — | 4.1 | 0.004 | 0.79 | 0.0 | 0.04 | 14.62 | 0.00 | 1.990 | 30.71 | 0.00 | 11.6 | 88.3 | 0.1 | -0.98 | 1.51 | 0.67 | 0.80 | — | 10503 | 682 | 4 | 28 | 2 | 0 | 4402 | logfile |
✔ | 6GKH | 0023 | 2023-11-15 | 2018-05-21 | 4.06 | 4.18 | 3.92 | 4.1 | 0.006 | 1.49 | 0.0 | 0.05 | 9.62 | 0.00 | 1.641 | 13.64 | 0.00 | 10.0 | 90.0 | 0.0 | -4.26 | 0.61 | 0.79 | — | 4.1 | 0.002 | 1.04 | 0.0 | 0.04 | 11.97 | 0.00 | 1.889 | 23.83 | 0.16 | 8.1 | 91.9 | 0.0 | -0.77 | 1.55 | 0.61 | 0.81 | — | 10587 | 685 | 4 | 30 | 4 | 0 | 4399 | logfile |
✔ | 6GKH | 0023 | 2023-12-09 | 2018-05-21 | 4.06 | 4.18 | 3.92 | 4.1 | 0.006 | 1.49 | 0.0 | 0.05 | 12.89 | 0.00 | 1.641 | 13.64 | 0.00 | 10.0 | 90.0 | 0.0 | -4.26 | 0.61 | 0.79 | — | 4.1 | 0.003 | 1.04 | 0.0 | 0.04 | 14.26 | 0.00 | 1.829 | 22.93 | 0.00 | 8.4 | 91.6 | 0.0 | -0.86 | 1.12 | 0.62 | 0.81 | — | 10587 | 685 | 4 | 30 | 4 | 0 | 4399 | logfile |
✔ | 6GKH | 0023 | 2023-09-30 | 2018-05-21 | 4.06 | 4.18 | 3.92 | 4.1 | 0.006 | 1.49 | 0.0 | 0.05 | 9.62 | 0.00 | 1.641 | 13.64 | 0.00 | 10.0 | 90.0 | 0.0 | -4.26 | 0.61 | 0.79 | — | 4.1 | 0.002 | 1.04 | 0.0 | 0.04 | 11.97 | 0.00 | 1.889 | 23.83 | 0.16 | 8.1 | 91.9 | 0.0 | -0.77 | 1.55 | 0.61 | 0.81 | — | 10587 | 685 | 4 | 30 | 4 | 0 | 4399 | logfile |
✔ | 6GKH | 0023 | 2024-01-19 | 2018-05-21 | 4.06 | 4.18 | 3.92 | 4.1 | 0.006 | 1.49 | 0.0 | 0.05 | 12.89 | 0.00 | 1.641 | 13.64 | 0.00 | 10.0 | 90.0 | 0.0 | -4.26 | 0.61 | 0.79 | — | 4.1 | 0.002 | 1.04 | 0.0 | 0.04 | 14.37 | 0.00 | 1.890 | 20.55 | 0.16 | 8.8 | 91.2 | 0.0 | -0.93 | 1.53 | 0.61 | 0.81 | — | 10587 | 685 | 4 | 30 | 4 | 0 | 4399 | logfile |