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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PAG | 13269 | 2023-08-09 | 2021-07-29 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.75 | 0.0 | 0.05 | 13.86 | 0.01 | 2.177 | 12.66 | 0.00 | 6.3 | 93.7 | 0.0 | -1.70 | 0.30 | 0.60 | — | 4.2 | 0.004 | 1.05 | 0.0 | 0.05 | 16.63 | 0.00 | 2.144 | 20.38 | 0.23 | 10.5 | 89.5 | 0.0 | -3.28 | 1.36 | 0.34 | 0.68 | — | 4040 | 509 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7XUN | 33475 | 2024-02-13 | 2022-05-19 | 3.4 | 3.91 | 3.41 | 3.8 | 0.002 | 0.57 | 0.0 | 0.04 | 13.72 | 0.00 | 2.129 | 11.02 | 0.00 | 4.1 | 95.9 | 0.0 | -0.92 | 0.72 | 0.76 | 0.33 | 3.8 | 0.004 | 0.68 | 0.0 | 0.05 | 15.88 | 0.00 | 2.137 | 13.82 | 2.77 | 5.2 | 94.8 | 0.0 | -0.25 | 1.11 | 0.73 | 0.78 | 0.26 | 5591 | 741 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PAG | 13269 | 2024-03-10 | 2021-07-29 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.75 | 0.0 | 0.05 | 13.81 | 0.01 | 2.177 | 12.66 | 0.00 | 6.3 | 93.7 | 0.0 | -1.70 | 0.30 | 0.60 | — | 4.2 | 0.004 | 1.01 | 0.0 | 0.05 | 16.56 | 0.00 | 2.166 | 19.75 | 3.20 | 9.1 | 90.9 | 0.0 | -3.22 | 1.27 | 0.33 | 0.68 | — | 4040 | 509 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7PAG | 13269 | 2023-07-03 | 2021-07-29 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.75 | 0.0 | 0.05 | 13.86 | 0.01 | 2.177 | 12.66 | 0.00 | 6.3 | 93.7 | 0.0 | -1.70 | 0.30 | 0.60 | — | 4.2 | 0.004 | 1.05 | 0.0 | 0.05 | 16.63 | 0.00 | 2.144 | 20.38 | 0.23 | 10.5 | 89.5 | 0.0 | -3.28 | 1.36 | 0.34 | 0.68 | — | 4040 | 509 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7PAG | 13269 | 2023-10-03 | 2021-07-29 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.75 | 0.0 | 0.05 | 13.86 | 0.01 | 2.177 | 12.66 | 0.00 | 6.3 | 93.7 | 0.0 | -1.70 | 0.30 | 0.60 | — | 4.2 | 0.004 | 1.05 | 0.0 | 0.05 | 16.63 | 0.00 | 2.144 | 20.38 | 0.23 | 10.5 | 89.5 | 0.0 | -3.28 | 1.36 | 0.34 | 0.68 | — | 4040 | 509 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7XUN | 33475 | 2024-01-17 | 2022-05-19 | 3.4 | 3.91 | 3.41 | 3.8 | 0.002 | 0.57 | 0.0 | 0.04 | 13.72 | 0.00 | 2.129 | 11.02 | 0.00 | 4.1 | 95.9 | 0.0 | -0.92 | 0.72 | 0.76 | 0.33 | 3.8 | 0.004 | 0.68 | 0.0 | 0.05 | 15.88 | 0.00 | 2.137 | 13.82 | 2.77 | 5.2 | 94.8 | 0.0 | -0.25 | 1.11 | 0.73 | 0.78 | 0.26 | 5591 | 741 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UES | 20755 | 2023-08-09 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 17.15 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.76 | — | 3.3 | 0.007 | 0.87 | 0.0 | 0.04 | 21.14 | 0.01 | 1.785 | 36.43 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.34 | 0.88 | 0.83 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |
✔ | 7PAG | 13269 | 2024-02-13 | 2021-07-29 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.75 | 0.0 | 0.05 | 13.81 | 0.01 | 2.177 | 12.66 | 0.00 | 6.3 | 93.7 | 0.0 | -1.70 | 0.30 | 0.60 | — | 4.2 | 0.004 | 1.01 | 0.0 | 0.05 | 16.56 | 0.00 | 2.166 | 19.75 | 3.20 | 9.1 | 90.9 | 0.0 | -3.22 | 1.27 | 0.33 | 0.68 | — | 4040 | 509 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7PAG | 13269 | 2024-04-05 | 2021-07-29 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.75 | 0.0 | 0.05 | 13.81 | 0.01 | 2.177 | 12.66 | 0.00 | 6.3 | 93.7 | 0.0 | -1.70 | 0.30 | 0.60 | — | 4.2 | 0.004 | 1.01 | 0.0 | 0.05 | 16.56 | 0.00 | 2.166 | 19.75 | 3.20 | 9.1 | 90.9 | 0.0 | -3.22 | 1.27 | 0.33 | 0.68 | — | 4040 | 509 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7VH3 | 31985 | 2023-07-06 | 2021-09-20 | 3.6 | 3.70 | — | 3.7 | 0.005 | 1.09 | 0.0 | 0.06 | 11.49 | 0.01 | 2.257 | 7.95 | 0.90 | 8.5 | 91.0 | 0.4 | -4.84 | 0.68 | 0.69 | 1.85 | 3.6 | 0.003 | 0.72 | 0.0 | 0.04 | 15.45 | 0.00 | 2.153 | 13.94 | 0.21 | 8.1 | 91.8 | 0.1 | -1.28 | 1.66 | 0.70 | 0.73 | 1.52 | 12749 | 1612 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PAG | 13269 | 2024-01-17 | 2021-07-29 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.75 | 0.0 | 0.05 | 13.81 | 0.01 | 2.177 | 12.66 | 0.00 | 6.3 | 93.7 | 0.0 | -1.70 | 0.30 | 0.60 | — | 4.2 | 0.004 | 1.01 | 0.0 | 0.05 | 16.56 | 0.00 | 2.166 | 19.75 | 3.20 | 9.1 | 90.9 | 0.0 | -3.22 | 1.27 | 0.33 | 0.68 | — | 4040 | 509 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7PAG | 13269 | 2023-09-28 | 2021-07-29 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.75 | 0.0 | 0.05 | 13.86 | 0.01 | 2.177 | 12.66 | 0.00 | 6.3 | 93.7 | 0.0 | -1.70 | 0.30 | 0.60 | — | 4.2 | 0.004 | 1.05 | 0.0 | 0.05 | 16.63 | 0.00 | 2.144 | 20.38 | 0.23 | 10.5 | 89.5 | 0.0 | -3.28 | 1.36 | 0.34 | 0.68 | — | 4040 | 509 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7PAG | 13269 | 2023-11-13 | 2021-07-29 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.75 | 0.0 | 0.05 | 13.86 | 0.01 | 2.177 | 12.66 | 0.00 | 6.3 | 93.7 | 0.0 | -1.70 | 0.30 | 0.60 | — | 4.2 | 0.004 | 1.05 | 0.0 | 0.05 | 16.63 | 0.00 | 2.144 | 20.38 | 0.23 | 10.5 | 89.5 | 0.0 | -3.28 | 1.36 | 0.34 | 0.68 | — | 4040 | 509 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7PAG | 13269 | 2023-12-07 | 2021-07-29 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.75 | 0.0 | 0.05 | 13.81 | 0.01 | 2.177 | 12.66 | 0.00 | 6.3 | 93.7 | 0.0 | -1.70 | 0.30 | 0.60 | — | 4.2 | 0.006 | 1.13 | 0.0 | 0.06 | 16.44 | 0.01 | 2.132 | 22.28 | 0.68 | 13.3 | 86.7 | 0.0 | -3.67 | 1.35 | 0.34 | 0.69 | — | 4040 | 509 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6UES | 20755 | 2024-04-05 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 26.31 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.76 | — | 3.3 | 0.007 | 0.89 | 0.0 | 0.04 | 27.66 | 0.01 | 1.797 | 37.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.86 | 0.88 | 0.83 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |
✔ | 6UES | 20755 | 2023-07-03 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 17.15 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.76 | — | 3.3 | 0.007 | 0.87 | 0.0 | 0.04 | 21.14 | 0.01 | 1.785 | 36.43 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.34 | 0.88 | 0.83 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |
✔ | 7VH3 | 31985 | 2024-04-08 | 2021-09-20 | 3.6 | 3.70 | — | 3.7 | 0.005 | 1.09 | 0.0 | 0.06 | 11.49 | 0.01 | 2.257 | 7.95 | 0.90 | 8.5 | 91.0 | 0.4 | -4.84 | 0.68 | 0.69 | 1.85 | 3.6 | 0.003 | 0.71 | 0.0 | 0.04 | 15.69 | 0.00 | 2.158 | 13.90 | 3.33 | 8.0 | 92.0 | 0.1 | -1.43 | 1.66 | 0.70 | 0.73 | 1.07 | 12749 | 1612 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5W1R | 8751 | 2023-12-13 | 2017-06-04 | 4.4 | 4.48 | — | 4.4 | 0.006 | 1.21 | 2.0 | 0.06 | 14.97 | 0.01 | 1.238 | 42.66 | 1.30 | 15.6 | 79.1 | 5.4 | -5.31 | 0.66 | 0.69 | — | 4.4 | 0.003 | 0.91 | 0.0 | 0.04 | 13.29 | 0.01 | 2.114 | 13.00 | 0.04 | 9.3 | 89.9 | 0.7 | -1.87 | 1.91 | 0.66 | 0.69 | — | 25559 | 3563 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XUN | 33475 | 2024-04-05 | 2022-05-19 | 3.4 | 3.91 | 3.41 | 3.8 | 0.002 | 0.57 | 0.0 | 0.04 | 13.72 | 0.00 | 2.129 | 11.02 | 0.00 | 4.1 | 95.9 | 0.0 | -0.92 | 0.72 | 0.76 | 0.33 | 3.8 | 0.004 | 0.68 | 0.0 | 0.05 | 15.88 | 0.00 | 2.137 | 13.82 | 2.77 | 5.2 | 94.8 | 0.0 | -0.25 | 1.11 | 0.73 | 0.78 | 0.26 | 5591 | 741 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XUN | 33475 | 2024-03-10 | 2022-05-19 | 3.4 | 3.91 | 3.41 | 3.8 | 0.002 | 0.57 | 0.0 | 0.04 | 13.72 | 0.00 | 2.129 | 11.02 | 0.00 | 4.1 | 95.9 | 0.0 | -0.92 | 0.72 | 0.76 | 0.33 | 3.8 | 0.004 | 0.68 | 0.0 | 0.05 | 15.88 | 0.00 | 2.137 | 13.82 | 2.77 | 5.2 | 94.8 | 0.0 | -0.25 | 1.11 | 0.73 | 0.78 | 0.26 | 5591 | 741 | 1 | 0 | 0 | 0 | 0 | logfile |