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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6QJT | 4567 | 2023-07-17 | 2019-01-24 | 3.74 | 4.09 | 3.65 | 3.9 | 0.005 | 0.85 | 0.0 | 0.05 | 9.40 | 0.01 | 2.298 | 3.56 | 0.00 | 5.4 | 94.6 | 0.0 | -3.36 | 0.78 | 0.85 | 2.29 | 3.9 | 0.003 | 0.70 | 0.0 | 0.04 | 13.65 | 0.00 | 2.250 | 10.42 | 0.12 | 3.4 | 96.6 | 0.0 | 0.86 | 2.38 | 0.79 | 0.86 | 2.08 | 38460 | 4932 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VZ4 | 32220 | 2024-03-15 | 2021-11-15 | 1.89 | 1.72 | — | 1.9 | 0.010 | 1.17 | 0.0 | 0.08 | 28.81 | 0.00 | 2.167 | 2.63 | 0.97 | 1.6 | 98.4 | 0.0 | 0.11 | 0.75 | 0.82 | 7.08 | 1.9 | 0.004 | 0.63 | 0.0 | 0.04 | 28.12 | 0.00 | 2.311 | 4.46 | 1.13 | 0.7 | 99.3 | 0.0 | 2.95 | 0.80 | 0.77 | 0.86 | 7.59 | 11843 | 746 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 6QJT | 4567 | 2023-10-18 | 2019-01-24 | 3.74 | 4.09 | 3.65 | 3.9 | 0.005 | 0.85 | 0.0 | 0.05 | 9.40 | 0.01 | 2.298 | 3.56 | 0.00 | 5.4 | 94.6 | 0.0 | -3.36 | 0.78 | 0.85 | 2.29 | 3.9 | 0.003 | 0.70 | 0.0 | 0.04 | 13.65 | 0.00 | 2.250 | 10.42 | 0.12 | 3.4 | 96.6 | 0.0 | 0.86 | 2.38 | 0.79 | 0.86 | 2.08 | 38460 | 4932 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VZ4 | 32220 | 2023-08-12 | 2021-11-15 | 1.89 | 1.72 | — | 1.9 | 0.010 | 1.17 | 0.0 | 0.08 | 29.00 | 0.00 | 2.167 | 2.63 | 0.97 | 1.6 | 98.4 | 0.0 | 0.11 | 0.75 | 0.82 | 7.08 | 1.9 | 0.004 | 0.66 | 0.0 | 0.04 | 28.48 | 0.00 | 2.304 | 4.22 | 0.49 | 0.5 | 99.5 | 0.0 | 2.82 | 0.80 | 0.78 | 0.86 | 7.64 | 11843 | 746 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 7VZ4 | 32220 | 2023-10-05 | 2021-11-15 | 1.89 | 1.72 | — | 1.9 | 0.010 | 1.17 | 0.0 | 0.08 | 29.00 | 0.00 | 2.167 | 2.63 | 0.97 | 1.6 | 98.4 | 0.0 | 0.11 | 0.75 | 0.82 | 7.08 | 1.9 | 0.005 | 0.70 | 0.0 | 0.04 | 28.42 | 0.01 | 2.320 | 4.08 | 0.49 | 0.5 | 99.5 | 0.0 | 2.76 | 0.80 | 0.78 | 0.86 | 7.64 | 11843 | 746 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 7PD4 | 13330 | 2023-12-08 | 2021-08-04 | 4.9 | 4.13 | — | 7.8 | 0.005 | 0.87 | 0.0 | 0.05 | 14.59 | 0.00 | 2.035 | 38.59 | 0.00 | 11.7 | 88.3 | 0.0 | -4.80 | 0.73 | 0.72 | — | 7.8 | 0.003 | 0.78 | 0.0 | 0.04 | 13.56 | 0.00 | 2.126 | 18.85 | 0.00 | 5.8 | 94.2 | 0.0 | -0.39 | 1.28 | 0.73 | 0.73 | — | 6676 | 842 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UUS | 20901 | 2024-01-18 | 2019-10-31 | 2.4 | 2.10 | 2.30 | 2.4 | 0.002 | 0.50 | 0.0 | 0.04 | 17.13 | 0.00 | 2.214 | 7.50 | 3.27 | 2.8 | 97.2 | 0.0 | -2.25 | 0.57 | 0.73 | 3.22 | 2.2 | 0.003 | 0.59 | 0.0 | 0.04 | 17.63 | 0.00 | 2.181 | 9.64 | 3.27 | 3.7 | 96.3 | 0.0 | 0.37 | 0.98 | 0.64 | 0.78 | 3.63 | 9308 | 1190 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UUS | 20901 | 2024-02-14 | 2019-10-31 | 2.4 | 2.10 | 2.30 | 2.4 | 0.002 | 0.50 | 0.0 | 0.04 | 17.13 | 0.00 | 2.214 | 7.50 | 3.27 | 2.8 | 97.2 | 0.0 | -2.25 | 0.57 | 0.73 | 3.22 | 2.2 | 0.003 | 0.59 | 0.0 | 0.04 | 17.63 | 0.00 | 2.181 | 9.64 | 3.27 | 3.7 | 96.3 | 0.0 | 0.37 | 0.98 | 0.64 | 0.78 | 3.63 | 9308 | 1190 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QJT | 4567 | 2024-03-23 | 2019-01-24 | 3.74 | 4.09 | 3.65 | 3.9 | 0.005 | 0.85 | 0.0 | 0.05 | 9.40 | 0.01 | 2.298 | 3.56 | 0.00 | 5.4 | 94.6 | 0.0 | -3.36 | 0.78 | 0.85 | 2.29 | 3.9 | 0.003 | 0.68 | 0.0 | 0.04 | 13.56 | 0.00 | 2.222 | 10.76 | 2.17 | 4.0 | 96.0 | 0.0 | 0.83 | 2.38 | 0.79 | 0.86 | 2.01 | 38460 | 4932 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UUS | 20901 | 2024-03-14 | 2019-10-31 | 2.4 | 2.10 | 2.30 | 2.4 | 0.002 | 0.50 | 0.0 | 0.04 | 17.13 | 0.00 | 2.214 | 7.50 | 3.27 | 2.8 | 97.2 | 0.0 | -2.25 | 0.57 | 0.73 | 3.22 | 2.2 | 0.003 | 0.59 | 0.0 | 0.04 | 17.63 | 0.00 | 2.181 | 9.64 | 3.27 | 3.7 | 96.3 | 0.0 | 0.37 | 0.98 | 0.64 | 0.78 | 3.63 | 9308 | 1190 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QJT | 4567 | 2023-08-24 | 2019-01-24 | 3.74 | 4.09 | 3.65 | 3.9 | 0.005 | 0.85 | 0.0 | 0.05 | 9.40 | 0.01 | 2.298 | 3.56 | 0.00 | 5.4 | 94.6 | 0.0 | -3.36 | 0.78 | 0.85 | 2.29 | 3.9 | 0.003 | 0.70 | 0.0 | 0.04 | 13.65 | 0.00 | 2.250 | 10.42 | 0.12 | 3.4 | 96.6 | 0.0 | 0.86 | 2.38 | 0.79 | 0.86 | 2.08 | 38460 | 4932 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NSC | 12564 | 2024-04-07 | 2021-03-05 | 3.3 | 3.46 | 3.32 | 3.4 | 0.005 | 0.71 | 0.0 | 0.04 | 14.50 | 0.00 | 1.732 | 9.65 | 0.10 | 8.3 | 91.7 | 0.0 | -1.46 | 0.77 | 0.81 | 2.53 | 3.5 | 0.002 | 0.55 | 0.0 | 0.04 | 16.20 | 0.00 | 2.155 | 8.02 | 2.08 | 5.6 | 94.4 | 0.0 | -0.16 | 0.90 | 0.76 | 0.81 | 1.32 | 9327 | 1230 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PD4 | 13330 | 2023-08-10 | 2021-08-04 | 4.9 | 4.13 | — | 7.8 | 0.005 | 0.87 | 0.0 | 0.05 | 14.59 | 0.00 | 2.035 | 38.59 | 0.00 | 11.7 | 88.3 | 0.0 | -4.80 | 0.73 | 0.72 | — | 7.8 | 0.003 | 0.78 | 0.0 | 0.04 | 13.56 | 0.00 | 2.126 | 18.85 | 0.00 | 5.8 | 94.2 | 0.0 | -0.39 | 1.28 | 0.73 | 0.73 | — | 6676 | 842 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NSC | 12564 | 2024-01-18 | 2021-03-05 | 3.3 | 3.46 | 3.32 | 3.4 | 0.005 | 0.71 | 0.0 | 0.04 | 14.50 | 0.00 | 1.732 | 9.65 | 0.10 | 8.3 | 91.7 | 0.0 | -1.46 | 0.77 | 0.81 | 2.53 | 3.5 | 0.002 | 0.55 | 0.0 | 0.04 | 16.20 | 0.00 | 2.155 | 8.02 | 2.08 | 5.6 | 94.4 | 0.0 | -0.16 | 0.90 | 0.76 | 0.81 | 1.32 | 9327 | 1230 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QJT | 4567 | 2024-02-23 | 2019-01-24 | 3.74 | 4.09 | 3.65 | 3.9 | 0.005 | 0.85 | 0.0 | 0.05 | 9.40 | 0.01 | 2.298 | 3.56 | 0.00 | 5.4 | 94.6 | 0.0 | -3.36 | 0.78 | 0.85 | 2.29 | 3.9 | 0.003 | 0.68 | 0.0 | 0.04 | 13.56 | 0.00 | 2.222 | 10.76 | 2.17 | 4.0 | 96.0 | 0.0 | 0.83 | 2.38 | 0.79 | 0.86 | 2.01 | 38460 | 4932 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NSC | 12564 | 2023-08-11 | 2021-03-05 | 3.3 | 3.46 | 3.32 | 3.4 | 0.005 | 0.71 | 0.0 | 0.04 | 14.50 | 0.00 | 1.732 | 9.65 | 0.10 | 8.3 | 91.7 | 0.0 | -1.46 | 0.77 | 0.81 | 2.53 | 3.5 | 0.002 | 0.57 | 0.0 | 0.04 | 16.15 | 0.00 | 2.076 | 7.96 | 0.31 | 5.9 | 94.1 | 0.0 | -0.21 | 0.89 | 0.76 | 0.82 | 1.32 | 9327 | 1230 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NSC | 12564 | 2023-10-04 | 2021-03-05 | 3.3 | 3.46 | 3.32 | 3.4 | 0.005 | 0.71 | 0.0 | 0.04 | 14.50 | 0.00 | 1.732 | 9.65 | 0.10 | 8.3 | 91.7 | 0.0 | -1.46 | 0.77 | 0.81 | 2.53 | 3.5 | 0.002 | 0.57 | 0.0 | 0.04 | 16.15 | 0.00 | 2.076 | 7.96 | 0.31 | 5.9 | 94.1 | 0.0 | -0.21 | 0.89 | 0.76 | 0.82 | 1.32 | 9327 | 1230 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NSC | 12564 | 2023-11-14 | 2021-03-05 | 3.3 | 3.46 | 3.32 | 3.4 | 0.005 | 0.71 | 0.0 | 0.04 | 14.50 | 0.00 | 1.732 | 9.65 | 0.10 | 8.3 | 91.7 | 0.0 | -1.46 | 0.77 | 0.81 | 2.53 | 3.5 | 0.002 | 0.57 | 0.0 | 0.04 | 16.15 | 0.00 | 2.076 | 7.96 | 0.31 | 5.9 | 94.1 | 0.0 | -0.21 | 0.89 | 0.76 | 0.82 | 1.32 | 9327 | 1230 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UUS | 20901 | 2023-09-29 | 2019-10-31 | 2.4 | 2.10 | 2.30 | 2.4 | 0.002 | 0.50 | 0.0 | 0.04 | 17.13 | 0.00 | 2.214 | 7.50 | 3.27 | 2.8 | 97.2 | 0.0 | -2.25 | 0.57 | 0.73 | 3.22 | 2.3 | 0.003 | 0.58 | 0.0 | 0.04 | 17.74 | 0.00 | 2.183 | 9.20 | 1.84 | 3.6 | 96.4 | 0.0 | 0.64 | 1.01 | 0.63 | 0.78 | 3.41 | 9308 | 1190 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6BF8 | 7092 | 2024-03-16 | 2017-10-26 | 4.2 | 4.69 | 4.96 | 7.4 | 0.007 | 1.21 | 0.0 | 0.06 | 11.02 | 0.01 | 2.252 | 7.53 | 0.00 | 3.8 | 96.2 | 0.0 | -4.13 | 0.80 | 0.71 | — | 4.1 | 0.003 | 0.74 | 0.0 | 0.04 | 12.58 | 0.00 | 2.122 | 23.08 | 0.00 | 7.5 | 92.5 | 0.0 | -1.12 | 2.33 | 0.80 | 0.72 | — | 15412 | 1888 | 2 | 0 | 0 | 0 | 0 | logfile |