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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6RLB | 4918 | 2024-02-18 | 2019-05-01 | 4.5 | 4.85 | 4.49 | 4.3 | 0.007 | 0.95 | 0.0 | 0.06 | 4.70 | 0.00 | 2.082 | 0.71 | 0.00 | 4.0 | 95.9 | 0.0 | -1.08 | 0.80 | 0.63 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 5.23 | 0.00 | 2.224 | 3.54 | 0.00 | 11.8 | 88.1 | 0.0 | -0.71 | 1.83 | 0.86 | 0.66 | — | 20407 | 4122 | 14 | 0 | 0 | 0 | 0 | logfile |
✘ | 6i52 | 4410 | 2024-02-13 | 2018-11-12 | 4.7 | 4.78 | — | 8.9 | 0.002 | 0.57 | 0.0 | 0.04 | 16.56 | 0.00 | 2.303 | 10.11 | 5.70 | 11.6 | 87.5 | 0.9 | -4.07 | 0.73 | 0.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3856 | 432 | 4 | 20 | 0 | 0 | 0 | logfile |
✔ | 7oRM | 13042 | 2023-08-15 | 2021-06-06 | 3.3 | 3.39 | — | 3.4 | 0.004 | 0.70 | 1.0 | 0.05 | 13.36 | 0.00 | 2.004 | 6.24 | 0.20 | 3.2 | 96.8 | 0.0 | 0.73 | 0.82 | 0.85 | 2.64 | 3.4 | 0.003 | 0.52 | 0.0 | 0.04 | 14.74 | 0.00 | 1.966 | 6.96 | 0.15 | 3.3 | 96.7 | 0.0 | 1.27 | 0.36 | 0.82 | 0.87 | 2.23 | 18369 | 2145 | 4 | 40 | 2 | 0 | 0 | logfile |
✔ | 7oRM | 13042 | 2023-12-11 | 2021-06-06 | 3.3 | 3.39 | — | 3.4 | 0.004 | 0.70 | 1.0 | 0.05 | 14.12 | 0.00 | 2.004 | 6.24 | 0.20 | 3.2 | 96.8 | 0.0 | 0.73 | 0.82 | 0.85 | 2.64 | 3.4 | 0.004 | 0.54 | 0.0 | 0.04 | 15.34 | 0.00 | 1.928 | 7.34 | 0.10 | 3.7 | 96.3 | 0.0 | 1.18 | 0.36 | 0.82 | 0.87 | 2.40 | 18369 | 2145 | 4 | 40 | 2 | 0 | 0 | logfile |
✔ | 6RLB | 4918 | 2024-04-10 | 2019-05-01 | 4.5 | 4.85 | 4.49 | 4.3 | 0.007 | 0.95 | 0.0 | 0.06 | 4.70 | 0.00 | 2.082 | 0.71 | 0.00 | 4.0 | 95.9 | 0.0 | -1.08 | 0.80 | 0.63 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 5.23 | 0.00 | 2.224 | 3.54 | 0.00 | 11.8 | 88.1 | 0.0 | -0.71 | 1.83 | 0.86 | 0.66 | — | 20407 | 4122 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RLB | 4918 | 2023-08-16 | 2019-05-01 | 4.5 | 4.85 | 4.49 | 4.3 | 0.007 | 0.95 | 0.0 | 0.06 | 4.70 | 0.00 | 2.082 | 0.71 | 0.00 | 4.0 | 95.9 | 0.0 | -1.08 | 0.80 | 0.63 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 5.23 | 0.00 | 2.224 | 3.54 | 0.00 | 11.8 | 88.1 | 0.0 | -0.71 | 1.83 | 0.86 | 0.66 | — | 20407 | 4122 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oRM | 13042 | 2024-03-17 | 2021-06-06 | 3.3 | 3.39 | — | 3.4 | 0.004 | 0.70 | 1.0 | 0.05 | 14.43 | 0.00 | 2.004 | 6.24 | 0.20 | 3.2 | 96.8 | 0.0 | 0.73 | 0.82 | 0.85 | 2.64 | 3.4 | 0.004 | 0.54 | 0.0 | 0.04 | 15.65 | 0.00 | 1.932 | 7.40 | 1.11 | 3.4 | 96.6 | 0.0 | 1.26 | 0.36 | 0.82 | 0.87 | 2.37 | 18369 | 2145 | 4 | 40 | 2 | 0 | 0 | logfile |
✔ | 7oRM | 13042 | 2023-07-09 | 2021-06-06 | 3.3 | 3.39 | — | 3.4 | 0.004 | 0.70 | 1.0 | 0.05 | 13.36 | 0.00 | 2.004 | 6.24 | 0.20 | 3.2 | 96.8 | 0.0 | 0.73 | 0.82 | 0.85 | 2.64 | 3.4 | 0.003 | 0.52 | 0.0 | 0.04 | 14.74 | 0.00 | 1.966 | 6.96 | 0.15 | 3.3 | 96.7 | 0.0 | 1.27 | 0.36 | 0.82 | 0.87 | 2.23 | 18369 | 2145 | 4 | 40 | 2 | 0 | 0 | logfile |
✔ | 7oRM | 13042 | 2023-10-09 | 2021-06-06 | 3.3 | 3.39 | — | 3.4 | 0.004 | 0.70 | 1.0 | 0.05 | 13.36 | 0.00 | 2.004 | 6.24 | 0.20 | 3.2 | 96.8 | 0.0 | 0.73 | 0.82 | 0.85 | 2.64 | 3.4 | 0.005 | 0.58 | 0.0 | 0.04 | 14.75 | 0.00 | 1.901 | 7.29 | 0.20 | 3.9 | 96.1 | 0.0 | 0.96 | 0.36 | 0.82 | 0.87 | 2.42 | 18369 | 2145 | 4 | 40 | 2 | 0 | 0 | logfile |
✔ | 7oRM | 13042 | 2023-11-17 | 2021-06-06 | 3.3 | 3.39 | — | 3.4 | 0.004 | 0.70 | 1.0 | 0.05 | 13.36 | 0.00 | 2.004 | 6.24 | 0.20 | 3.2 | 96.8 | 0.0 | 0.73 | 0.82 | 0.85 | 2.64 | 3.4 | 0.005 | 0.58 | 0.0 | 0.04 | 14.75 | 0.00 | 1.901 | 7.29 | 0.20 | 3.9 | 96.1 | 0.0 | 0.96 | 0.36 | 0.82 | 0.87 | 2.42 | 18369 | 2145 | 4 | 40 | 2 | 0 | 0 | logfile |
✔ | 5K7L | 8215 | 2023-11-19 | 2016-05-26 | 3.78 | 6.37 | — | 3.6 | 0.008 | 1.36 | 20.0 | 0.07 | 13.27 | 0.00 | 2.315 | 9.11 | 0.35 | 7.3 | 92.6 | 0.1 | -0.20 | 0.75 | 0.79 | 1.04 | 3.6 | 0.003 | 0.70 | 0.0 | 0.04 | 13.79 | 0.00 | 2.151 | 11.88 | 0.22 | 4.0 | 96.0 | 0.0 | 1.44 | 2.35 | 0.75 | 0.80 | 0.78 | 24696 | 3372 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 6RLB | 4918 | 2024-03-18 | 2019-05-01 | 4.5 | 4.85 | 4.49 | 4.3 | 0.007 | 0.95 | 0.0 | 0.06 | 4.70 | 0.00 | 2.082 | 0.71 | 0.00 | 4.0 | 95.9 | 0.0 | -1.08 | 0.80 | 0.63 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 5.23 | 0.00 | 2.224 | 3.54 | 0.00 | 11.8 | 88.1 | 0.0 | -0.71 | 1.83 | 0.86 | 0.66 | — | 20407 | 4122 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RLB | 4918 | 2023-07-10 | 2019-05-01 | 4.5 | 4.85 | 4.49 | 4.3 | 0.007 | 0.95 | 0.0 | 0.06 | 4.70 | 0.00 | 2.082 | 0.71 | 0.00 | 4.0 | 95.9 | 0.0 | -1.08 | 0.80 | 0.63 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 5.23 | 0.00 | 2.224 | 3.54 | 0.00 | 11.8 | 88.1 | 0.0 | -0.71 | 1.83 | 0.86 | 0.66 | — | 20407 | 4122 | 14 | 0 | 0 | 0 | 0 | logfile |
✘ | 6i52 | 4410 | 2024-01-17 | 2018-11-12 | 4.7 | 4.78 | — | 8.9 | 0.002 | 0.57 | 0.0 | 0.04 | 16.56 | 0.00 | 2.303 | 10.11 | 5.70 | 11.6 | 87.5 | 0.9 | -4.07 | 0.73 | 0.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3856 | 432 | 4 | 20 | 0 | 0 | 0 | logfile |
✔ | 5K7L | 8215 | 2023-12-13 | 2016-05-26 | 3.78 | 6.37 | — | 3.6 | 0.008 | 1.36 | 20.0 | 0.07 | 13.10 | 0.00 | 2.315 | 9.11 | 0.35 | 7.3 | 92.6 | 0.1 | -0.20 | 0.75 | 0.79 | 1.04 | 3.6 | 0.004 | 0.71 | 0.0 | 0.04 | 13.61 | 0.00 | 2.131 | 11.66 | 0.26 | 3.9 | 96.1 | 0.0 | 1.49 | 1.46 | 0.75 | 0.81 | 0.81 | 24696 | 3372 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 7oRM | 13042 | 2024-02-17 | 2021-06-06 | 3.3 | 3.39 | — | 3.4 | 0.004 | 0.70 | 1.0 | 0.05 | 14.43 | 0.00 | 2.004 | 6.24 | 0.20 | 3.2 | 96.8 | 0.0 | 0.73 | 0.82 | 0.85 | 2.64 | 3.4 | 0.004 | 0.54 | 0.0 | 0.04 | 15.65 | 0.00 | 1.932 | 7.40 | 1.11 | 3.4 | 96.6 | 0.0 | 1.26 | 0.36 | 0.82 | 0.87 | 2.37 | 18369 | 2145 | 4 | 40 | 2 | 0 | 0 | logfile |
✔ | 5K7L | 8215 | 2023-08-18 | 2016-05-26 | 3.78 | 6.37 | — | 3.6 | 0.008 | 1.36 | 20.0 | 0.07 | 13.27 | 0.00 | 2.315 | 9.11 | 0.35 | 7.3 | 92.6 | 0.1 | -0.20 | 0.75 | 0.79 | 1.04 | 3.6 | 0.003 | 0.70 | 0.0 | 0.04 | 13.79 | 0.00 | 2.151 | 11.88 | 0.22 | 4.0 | 96.0 | 0.0 | 1.44 | 2.35 | 0.75 | 0.80 | 0.78 | 24696 | 3372 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 7oRM | 13042 | 2024-04-10 | 2021-06-06 | 3.3 | 3.39 | — | 3.4 | 0.004 | 0.70 | 1.0 | 0.05 | 14.43 | 0.00 | 2.004 | 6.24 | 0.20 | 3.2 | 96.8 | 0.0 | 0.73 | 0.82 | 0.85 | 2.64 | 3.4 | 0.004 | 0.54 | 0.0 | 0.04 | 15.65 | 0.00 | 1.932 | 7.40 | 1.11 | 3.4 | 96.6 | 0.0 | 1.26 | 0.36 | 0.82 | 0.87 | 2.37 | 18369 | 2145 | 4 | 40 | 2 | 0 | 0 | logfile |
✔ | 5K7L | 8215 | 2023-10-12 | 2016-05-26 | 3.78 | 6.37 | — | 3.6 | 0.008 | 1.36 | 20.0 | 0.07 | 13.27 | 0.00 | 2.315 | 9.11 | 0.35 | 7.3 | 92.6 | 0.1 | -0.20 | 0.75 | 0.79 | 1.04 | 3.6 | 0.003 | 0.70 | 0.0 | 0.04 | 13.79 | 0.00 | 2.151 | 11.88 | 0.22 | 4.0 | 96.0 | 0.0 | 1.44 | 2.35 | 0.75 | 0.80 | 0.78 | 24696 | 3372 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 6RLB | 4918 | 2023-10-10 | 2019-05-01 | 4.5 | 4.85 | 4.49 | 4.3 | 0.007 | 0.95 | 0.0 | 0.06 | 4.70 | 0.00 | 2.082 | 0.71 | 0.00 | 4.0 | 95.9 | 0.0 | -1.08 | 0.80 | 0.63 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 5.23 | 0.00 | 2.224 | 3.54 | 0.00 | 11.8 | 88.1 | 0.0 | -0.71 | 1.83 | 0.86 | 0.66 | — | 20407 | 4122 | 14 | 0 | 0 | 0 | 0 | logfile |