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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ZiR | 14738 | 2024-02-13 | 2022-04-08 | 2.5 | 2.51 | 2.04 | 2.7 | 0.002 | 0.34 | 0.0 | 0.03 | 9.02 | 0.00 | 2.317 | 1.65 | 0.00 | 2.0 | 98.0 | 0.0 | -3.82 | 0.48 | 0.90 | 7.46 | 2.7 | 0.003 | 0.46 | 0.0 | 0.04 | 12.13 | 0.00 | 2.312 | 0.55 | 0.00 | 3.7 | 96.3 | 0.0 | -3.81 | 1.03 | 0.51 | 0.93 | 7.87 | 2120 | 255 | 10 | 0 | 0 | 50 | 0 | logfile |
✔ | 7JG8 | 22314 | 2023-12-12 | 2020-07-18 | 3.3 | 2.35 | 3.37 | 3.3 | 0.009 | 1.50 | 0.0 | 0.20 | 9.46 | 0.01 | 2.424 | 0.51 | 0.00 | 3.2 | 96.6 | 0.2 | -1.30 | 0.62 | 0.55 | — | 3.4 | 0.004 | 0.90 | 0.0 | 0.08 | 7.14 | 0.00 | 2.237 | 0.59 | 0.00 | 10.4 | 89.6 | 0.1 | -0.98 | 1.26 | 0.72 | 0.71 | — | 19573 | 4827 | 26 | 0 | 7 | 0 | 0 | logfile |
✔ | 8Q9i | 18282 | 2024-01-17 | 2023-08-20 | 2.56 | 2.01 | 2.38 | 2.2 | 0.011 | 1.80 | 0.0 | 0.08 | 11.44 | 0.01 | 2.520 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -1.34 | 0.29 | 0.75 | 7.51 | 2.2 | 0.003 | 0.59 | 0.0 | 0.05 | 16.79 | 0.00 | 2.225 | 0.59 | 0.52 | 0.5 | 99.5 | 0.0 | -1.59 | 1.47 | 0.37 | 0.86 | 7.22 | 3411 | 219 | 3 | 0 | 0 | 0 | 1740 | logfile |
✔ | 7JG8 | 22314 | 2024-02-17 | 2020-07-18 | 3.3 | 2.35 | 3.37 | 3.3 | 0.009 | 1.50 | 0.0 | 0.20 | 9.46 | 0.01 | 2.424 | 0.51 | 0.00 | 3.2 | 96.6 | 0.2 | -1.30 | 0.62 | 0.55 | — | 3.4 | 0.004 | 0.90 | 0.0 | 0.08 | 7.14 | 0.00 | 2.237 | 0.59 | 0.00 | 10.4 | 89.6 | 0.1 | -0.98 | 1.26 | 0.72 | 0.71 | — | 19573 | 4827 | 26 | 0 | 7 | 0 | 0 | logfile |
✔ | 7JG8 | 22314 | 2024-03-18 | 2020-07-18 | 3.3 | 2.35 | 3.37 | 3.3 | 0.009 | 1.50 | 0.0 | 0.20 | 9.46 | 0.01 | 2.424 | 0.51 | 0.00 | 3.2 | 96.6 | 0.2 | -1.30 | 0.62 | 0.55 | — | 3.4 | 0.004 | 0.90 | 0.0 | 0.08 | 7.14 | 0.00 | 2.237 | 0.59 | 0.00 | 10.4 | 89.6 | 0.1 | -0.98 | 1.26 | 0.72 | 0.71 | — | 19573 | 4827 | 26 | 0 | 7 | 0 | 0 | logfile |
✔ | 7JG8 | 22314 | 2024-04-10 | 2020-07-18 | 3.3 | 2.35 | 3.37 | 3.3 | 0.009 | 1.50 | 0.0 | 0.20 | 9.46 | 0.01 | 2.424 | 0.51 | 0.00 | 3.2 | 96.6 | 0.2 | -1.30 | 0.62 | 0.55 | — | 3.4 | 0.004 | 0.90 | 0.0 | 0.08 | 7.14 | 0.00 | 2.237 | 0.59 | 0.00 | 10.4 | 89.6 | 0.1 | -0.98 | 1.26 | 0.72 | 0.71 | — | 19573 | 4827 | 26 | 0 | 7 | 0 | 0 | logfile |
✔ | 8DXR | 27774 | 2023-11-15 | 2022-08-02 | 4.0 | 4.31 | 4.01 | 4.2 | 0.004 | 0.81 | 0.0 | 0.04 | 5.27 | 0.00 | 2.255 | 1.54 | 0.00 | 11.6 | 88.3 | 0.1 | -0.80 | 0.67 | 0.71 | — | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 3.77 | 0.00 | 2.420 | 0.60 | 0.00 | 8.3 | 91.6 | 0.1 | 1.47 | 0.34 | 0.67 | 0.71 | — | 10435 | 2101 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DXR | 27774 | 2024-01-19 | 2022-08-02 | 4.0 | 4.31 | 4.01 | 4.2 | 0.004 | 0.81 | 0.0 | 0.04 | 5.27 | 0.00 | 2.255 | 1.54 | 0.00 | 11.6 | 88.3 | 0.1 | -0.80 | 0.67 | 0.71 | — | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 3.77 | 0.00 | 2.420 | 0.60 | 0.00 | 8.3 | 91.6 | 0.1 | 1.47 | 0.34 | 0.67 | 0.71 | — | 10435 | 2101 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DXR | 27774 | 2023-12-09 | 2022-08-02 | 4.0 | 4.31 | 4.01 | 4.2 | 0.004 | 0.81 | 0.0 | 0.04 | 5.27 | 0.00 | 2.255 | 1.54 | 0.00 | 11.6 | 88.3 | 0.1 | -0.80 | 0.67 | 0.71 | — | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 3.77 | 0.00 | 2.420 | 0.60 | 0.00 | 8.3 | 91.6 | 0.1 | 1.47 | 0.34 | 0.67 | 0.71 | — | 10435 | 2101 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DXR | 27774 | 2024-02-14 | 2022-08-02 | 4.0 | 4.31 | 4.01 | 4.2 | 0.004 | 0.81 | 0.0 | 0.04 | 5.27 | 0.00 | 2.255 | 1.54 | 0.00 | 11.6 | 88.3 | 0.1 | -0.80 | 0.67 | 0.71 | — | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 3.77 | 0.00 | 2.420 | 0.60 | 0.00 | 8.3 | 91.6 | 0.1 | 1.47 | 0.34 | 0.67 | 0.71 | — | 10435 | 2101 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DXR | 27774 | 2023-10-05 | 2022-08-02 | 4.0 | 4.31 | 4.01 | 4.2 | 0.004 | 0.81 | 0.0 | 0.04 | 5.27 | 0.00 | 2.255 | 1.54 | 0.00 | 11.6 | 88.3 | 0.1 | -0.80 | 0.67 | 0.71 | — | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 3.77 | 0.00 | 2.420 | 0.60 | 0.00 | 8.3 | 91.6 | 0.1 | 1.47 | 0.34 | 0.67 | 0.71 | — | 10435 | 2101 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DXR | 27774 | 2024-03-15 | 2022-08-02 | 4.0 | 4.31 | 4.01 | 4.2 | 0.004 | 0.81 | 0.0 | 0.04 | 5.27 | 0.00 | 2.255 | 1.54 | 0.00 | 11.6 | 88.3 | 0.1 | -0.80 | 0.67 | 0.71 | — | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 3.77 | 0.00 | 2.420 | 0.60 | 0.00 | 8.3 | 91.6 | 0.1 | 1.47 | 0.34 | 0.67 | 0.71 | — | 10435 | 2101 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DXR | 27774 | 2023-09-30 | 2022-08-02 | 4.0 | 4.31 | 4.01 | 4.2 | 0.004 | 0.81 | 0.0 | 0.04 | 5.27 | 0.00 | 2.255 | 1.54 | 0.00 | 11.6 | 88.3 | 0.1 | -0.80 | 0.67 | 0.71 | — | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 3.77 | 0.00 | 2.420 | 0.60 | 0.00 | 8.3 | 91.6 | 0.1 | 1.47 | 0.34 | 0.67 | 0.71 | — | 10435 | 2101 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DXR | 27774 | 2024-04-07 | 2022-08-02 | 4.0 | 4.31 | 4.01 | 4.2 | 0.004 | 0.81 | 0.0 | 0.04 | 5.27 | 0.00 | 2.255 | 1.54 | 0.00 | 11.6 | 88.3 | 0.1 | -0.80 | 0.67 | 0.71 | — | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 3.77 | 0.00 | 2.420 | 0.60 | 0.00 | 8.3 | 91.6 | 0.1 | 1.47 | 0.34 | 0.67 | 0.71 | — | 10435 | 2101 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DXR | 27774 | 2023-07-05 | 2022-08-02 | 4.0 | 4.31 | 4.01 | 4.2 | 0.004 | 0.81 | 0.0 | 0.04 | 5.27 | 0.00 | 2.255 | 1.54 | 0.00 | 11.6 | 88.3 | 0.1 | -0.80 | 0.67 | 0.71 | — | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 3.77 | 0.00 | 2.420 | 0.60 | 0.00 | 8.3 | 91.6 | 0.1 | 1.47 | 0.34 | 0.67 | 0.71 | — | 10435 | 2101 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DXR | 27774 | 2023-08-11 | 2022-08-02 | 4.0 | 4.31 | 4.01 | 4.2 | 0.004 | 0.81 | 0.0 | 0.04 | 5.27 | 0.00 | 2.255 | 1.54 | 0.00 | 11.6 | 88.3 | 0.1 | -0.80 | 0.67 | 0.71 | — | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 3.77 | 0.00 | 2.420 | 0.60 | 0.00 | 8.3 | 91.6 | 0.1 | 1.47 | 0.34 | 0.67 | 0.71 | — | 10435 | 2101 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CG3 | 16628 | 2023-09-27 | 2023-02-03 | 2.39 | 2.55 | 2.34 | 2.5 | 0.012 | 1.69 | 0.0 | 0.08 | 14.77 | 0.01 | 2.619 | 1.73 | 0.00 | 2.3 | 97.7 | 0.0 | -4.90 | 0.52 | 0.96 | 8.23 | 2.5 | 0.004 | 0.84 | 0.0 | 0.04 | 16.20 | 0.00 | 2.636 | 0.69 | 0.71 | 1.8 | 98.2 | 0.0 | -4.73 | 0.32 | 0.51 | 0.94 | 7.39 | 3040 | 445 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8P34 | 17383 | 2023-10-02 | 2023-05-17 | 2.61 | 2.80 | 2.24 | 2.8 | 0.009 | 1.32 | 0.0 | 0.08 | 11.05 | 0.01 | 2.651 | 0.69 | 0.00 | 5.4 | 94.6 | 0.0 | -1.84 | 0.29 | 0.90 | 7.34 | 2.8 | 0.002 | 0.50 | 0.0 | 0.05 | 13.21 | 0.00 | 2.693 | 0.69 | 0.00 | 4.3 | 95.7 | 0.0 | -1.63 | 0.36 | 0.28 | 0.88 | 6.21 | 711 | 94 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8P34 | 17383 | 2023-12-07 | 2023-05-17 | 2.61 | 2.80 | 2.24 | 2.8 | 0.009 | 1.32 | 0.0 | 0.08 | 11.05 | 0.01 | 2.651 | 0.69 | 0.00 | 5.4 | 94.6 | 0.0 | -1.84 | 0.29 | 0.90 | 7.34 | 2.8 | 0.002 | 0.50 | 0.0 | 0.05 | 13.21 | 0.00 | 2.693 | 0.69 | 0.00 | 4.3 | 95.7 | 0.0 | -1.63 | 0.36 | 0.28 | 0.88 | 6.21 | 711 | 94 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8P34 | 17383 | 2024-02-13 | 2023-05-17 | 2.61 | 2.80 | 2.24 | 2.8 | 0.009 | 1.32 | 0.0 | 0.08 | 11.05 | 0.01 | 2.651 | 0.69 | 0.00 | 5.4 | 94.6 | 0.0 | -1.84 | 0.29 | 0.90 | 7.34 | 2.8 | 0.003 | 0.53 | 0.0 | 0.05 | 13.66 | 0.00 | 2.674 | 0.69 | 1.23 | 4.3 | 95.7 | 0.0 | -1.62 | 0.28 | 0.28 | 0.88 | 6.38 | 711 | 94 | 1 | 0 | 0 | 0 | 0 | logfile |