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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6JPB | 9869 | 2023-11-18 | 2019-03-26 | 2.9 | 3.09 | — | 3.1 | 0.015 | 1.48 | 3.0 | 0.12 | 13.70 | 0.01 | 1.739 | 21.16 | 4.38 | 8.5 | 91.1 | 0.4 | -4.25 | 0.61 | 0.77 | 2.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21989 | 2694 | 14 | 0 | 35 | 0 | 0 | logfile |
✘ | 7oF2 | 12867 | 2023-12-17 | 2021-05-04 | 2.7 | 3.20 | 2.66 | 2.9 | 0.003 | 0.54 | 0.0 | 0.04 | 18.33 | 0.01 | 1.840 | 4.36 | 0.01 | 3.1 | 96.9 | 0.0 | 1.20 | 0.89 | 0.89 | 3.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 101195 | 8560 | 64 | 1466 | 91 | 0 | 0 | logfile |
✘ | 6JPB | 9869 | 2024-04-11 | 2019-03-26 | 2.9 | 3.09 | — | 3.1 | 0.015 | 1.48 | 3.0 | 0.12 | 16.40 | 0.01 | 1.739 | 21.16 | 4.38 | 8.5 | 91.1 | 0.4 | -4.25 | 0.61 | 0.77 | 2.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21989 | 2694 | 14 | 0 | 35 | 0 | 0 | logfile |
✘ | 6JPB | 9869 | 2023-10-10 | 2019-03-26 | 2.9 | 3.09 | — | 3.1 | 0.015 | 1.48 | 3.0 | 0.12 | 13.70 | 0.01 | 1.739 | 21.16 | 4.38 | 8.5 | 91.1 | 0.4 | -4.25 | 0.61 | 0.77 | 2.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21989 | 2694 | 14 | 0 | 35 | 0 | 0 | logfile |
✘ | 6T0N | 10356 | 2023-07-07 | 2019-10-03 | 2.54 | 2.64 | 2.56 | 2.6 | 0.005 | 0.69 | 0.0 | 0.05 | 14.69 | 0.01 | 2.105 | 3.18 | 4.90 | 4.3 | 95.4 | 0.2 | -2.43 | 0.73 | 0.89 | 4.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14598 | 1703 | 12 | 29 | 2 | 268 | 0 | logfile |
✘ | 7UL4 | 26591 | 2024-01-17 | 2022-04-03 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2524 | 351 | 3 | 0 | 1 | 4 | 0 | logfile |
✘ | 7oiC | 12925 | 2023-12-16 | 2021-05-11 | 3.1 | 3.04 | — | 3.0 | 0.014 | 1.27 | 1.0 | 0.11 | 19.89 | 0.01 | 1.916 | 8.15 | 0.13 | 7.7 | 92.2 | 0.1 | -1.98 | 0.75 | 0.78 | 2.96 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 100859 | 8614 | 67 | 1441 | 81 | 0 | 0 | logfile |
✘ | 6JPB | 9869 | 2024-03-18 | 2019-03-26 | 2.9 | 3.09 | — | 3.1 | 0.015 | 1.48 | 3.0 | 0.12 | 16.40 | 0.01 | 1.739 | 21.16 | 4.38 | 8.5 | 91.1 | 0.4 | -4.25 | 0.61 | 0.77 | 2.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21989 | 2694 | 14 | 0 | 35 | 0 | 0 | logfile |
✘ | 6JPB | 9869 | 2023-07-10 | 2019-03-26 | 2.9 | 3.09 | — | 3.1 | 0.015 | 1.48 | 3.0 | 0.12 | 13.70 | 0.01 | 1.739 | 21.16 | 4.38 | 8.5 | 91.1 | 0.4 | -4.25 | 0.61 | 0.77 | 2.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21989 | 2694 | 14 | 0 | 35 | 0 | 0 | logfile |
✘ | 6JPB | 9869 | 2023-08-17 | 2019-03-26 | 2.9 | 3.09 | — | 3.1 | 0.015 | 1.48 | 3.0 | 0.12 | 13.70 | 0.01 | 1.739 | 21.16 | 4.38 | 8.5 | 91.1 | 0.4 | -4.25 | 0.61 | 0.77 | 2.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21989 | 2694 | 14 | 0 | 35 | 0 | 0 | logfile |
✘ | 6JPB | 9869 | 2023-12-12 | 2019-03-26 | 2.9 | 3.09 | — | 3.1 | 0.015 | 1.48 | 3.0 | 0.12 | 15.85 | 0.01 | 1.739 | 21.16 | 4.38 | 8.5 | 91.1 | 0.4 | -4.25 | 0.61 | 0.77 | 2.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21989 | 2694 | 14 | 0 | 35 | 0 | 0 | logfile |
✘ | 6T0N | 10356 | 2023-08-13 | 2019-10-03 | 2.54 | 2.64 | 2.56 | 2.6 | 0.005 | 0.69 | 0.0 | 0.05 | 14.69 | 0.01 | 2.105 | 3.18 | 4.90 | 4.3 | 95.4 | 0.2 | -2.43 | 0.73 | 0.89 | 4.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14598 | 1703 | 12 | 29 | 2 | 268 | 0 | logfile |
✘ | 7SN7 | 25213 | 2023-11-20 | 2021-10-27 | 4.2 | 4.22 | — | 4.1 | 0.003 | 0.63 | 0.0 | 0.04 | 13.41 | 0.00 | 2.099 | 13.03 | 0.07 | 8.3 | 91.7 | 0.0 | 0.65 | 0.47 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 90482 | 12558 | 23 | 0 | 0 | 0 | 0 | logfile |
✘ | 7UL4 | 26591 | 2024-02-13 | 2022-04-03 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2524 | 351 | 3 | 0 | 1 | 4 | 0 | logfile |
✘ | 7WTU | 32801 | 2024-02-19 | 2022-02-05 | 3.0 | 2.94 | — | 2.8 | 0.006 | 0.90 | 0.0 | 0.05 | 21.50 | 0.01 | 1.590 | 5.93 | 0.86 | 4.3 | 95.6 | 0.0 | -1.34 | 0.70 | 0.65 | 2.51 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 81215 | 5957 | 35 | 1575 | 1 | 0 | 0 | logfile |
✘ | 6CP6 | 7548 | 2024-04-16 | 2018-03-13 | 3.6 | 3.73 | — | 3.6 | 0.007 | 1.09 | 0.0 | 0.05 | 10.95 | 0.01 | 2.196 | 10.99 | 0.66 | 5.5 | 94.2 | 0.3 | -3.06 | 0.75 | 0.74 | 1.64 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38853 | 5128 | 32 | 0 | 5 | 0 | 0 | logfile |
✘ | 7V82 | 31787 | 2024-04-16 | 2021-08-22 | 2.8 | 3.88 | — | 3.0 | 0.005 | 0.62 | 0.0 | 0.05 | 15.22 | 0.00 | 2.150 | 10.11 | 0.00 | 5.1 | 94.9 | 0.0 | -0.41 | 0.84 | 0.78 | 1.93 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40092 | 4902 | 39 | 0 | 84 | 0 | 0 | logfile |
✘ | 6JPB | 9869 | 2024-02-18 | 2019-03-26 | 2.9 | 3.09 | — | 3.1 | 0.015 | 1.48 | 3.0 | 0.12 | 16.40 | 0.01 | 1.739 | 21.16 | 4.38 | 8.5 | 91.1 | 0.4 | -4.25 | 0.61 | 0.77 | 2.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21989 | 2694 | 14 | 0 | 35 | 0 | 0 | logfile |
✘ | 7Z18 | 14444 | 2024-03-23 | 2022-02-24 | 1.98 | 2.40 | 2.04 | 2.3 | 0.008 | 0.94 | 0.0 | 0.06 | 15.45 | 0.01 | 1.726 | 3.36 | 1.19 | 1.9 | 98.1 | 0.0 | 1.45 | 0.79 | 0.82 | 5.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37659 | 2432 | 18 | 0 | 10 | 2 | 18660 | logfile |
✘ | 7Z18 | 14444 | 2024-02-23 | 2022-02-24 | 1.98 | 2.40 | 2.04 | 2.3 | 0.008 | 0.94 | 0.0 | 0.06 | 15.45 | 0.01 | 1.726 | 3.36 | 1.19 | 1.9 | 98.1 | 0.0 | 1.45 | 0.79 | 0.82 | 5.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37659 | 2432 | 18 | 0 | 10 | 2 | 18660 | logfile |