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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7DWV | 30887 | 2023-11-13 | 2021-01-18 | 3.07 | 2.95 | — | 3.6 | 0.007 | 0.80 | 0.0 | 0.06 | 14.69 | 0.00 | 2.258 | 16.67 | 0.00 | 26.8 | 73.2 | 0.0 | -7.45 | 0.41 | 0.75 | 4.09 | 4.1 | 0.004 | 0.72 | 0.0 | 0.05 | 17.18 | 0.00 | 2.182 | 17.15 | 1.19 | 22.4 | 77.6 | 0.0 | -6.08 | 1.50 | 0.41 | 0.75 | 2.54 | 2064 | 258 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DWV | 30887 | 2023-10-02 | 2021-01-18 | 3.07 | 2.95 | — | 3.6 | 0.007 | 0.80 | 0.0 | 0.06 | 14.69 | 0.00 | 2.258 | 16.67 | 0.00 | 26.8 | 73.2 | 0.0 | -7.45 | 0.41 | 0.75 | 4.09 | 4.1 | 0.004 | 0.72 | 0.0 | 0.05 | 17.18 | 0.00 | 2.182 | 17.15 | 1.19 | 22.4 | 77.6 | 0.0 | -6.08 | 1.50 | 0.41 | 0.75 | 2.54 | 2064 | 258 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DWV | 30887 | 2024-02-13 | 2021-01-18 | 3.07 | 2.95 | — | 3.6 | 0.007 | 0.80 | 0.0 | 0.06 | 14.69 | 0.00 | 2.258 | 16.67 | 0.00 | 26.8 | 73.2 | 0.0 | -7.45 | 0.41 | 0.75 | 4.09 | 4.1 | 0.004 | 0.78 | 0.0 | 0.05 | 17.73 | 0.00 | 2.189 | 18.12 | 19.05 | 23.6 | 76.4 | 0.0 | -6.14 | 1.49 | 0.41 | 0.75 | 2.77 | 2064 | 258 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DWV | 30887 | 2024-04-05 | 2021-01-18 | 3.07 | 2.95 | — | 3.6 | 0.007 | 0.80 | 0.0 | 0.06 | 14.69 | 0.00 | 2.258 | 16.67 | 0.00 | 26.8 | 73.2 | 0.0 | -7.45 | 0.41 | 0.75 | 4.09 | 4.1 | 0.004 | 0.78 | 0.0 | 0.05 | 17.73 | 0.00 | 2.189 | 18.12 | 19.05 | 23.6 | 76.4 | 0.0 | -6.14 | 1.49 | 0.41 | 0.75 | 2.77 | 2064 | 258 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DWV | 30887 | 2023-08-09 | 2021-01-18 | 3.07 | 2.95 | — | 3.6 | 0.007 | 0.80 | 0.0 | 0.06 | 14.69 | 0.00 | 2.258 | 16.67 | 0.00 | 26.8 | 73.2 | 0.0 | -7.45 | 0.41 | 0.75 | 4.09 | 4.1 | 0.004 | 0.72 | 0.0 | 0.05 | 17.18 | 0.00 | 2.182 | 17.15 | 1.19 | 22.4 | 77.6 | 0.0 | -6.08 | 1.50 | 0.41 | 0.75 | 2.54 | 2064 | 258 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DWV | 30887 | 2023-09-27 | 2021-01-18 | 3.07 | 2.95 | — | 3.6 | 0.007 | 0.80 | 0.0 | 0.06 | 14.69 | 0.00 | 2.258 | 16.67 | 0.00 | 26.8 | 73.2 | 0.0 | -7.45 | 0.41 | 0.75 | 4.09 | 4.1 | 0.004 | 0.72 | 0.0 | 0.05 | 17.18 | 0.00 | 2.182 | 17.15 | 1.19 | 22.4 | 77.6 | 0.0 | -6.08 | 1.50 | 0.41 | 0.75 | 2.54 | 2064 | 258 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DWV | 30887 | 2024-03-10 | 2021-01-18 | 3.07 | 2.95 | — | 3.6 | 0.007 | 0.80 | 0.0 | 0.06 | 14.69 | 0.00 | 2.258 | 16.67 | 0.00 | 26.8 | 73.2 | 0.0 | -7.45 | 0.41 | 0.75 | 4.09 | 4.1 | 0.004 | 0.78 | 0.0 | 0.05 | 17.73 | 0.00 | 2.189 | 18.12 | 19.05 | 23.6 | 76.4 | 0.0 | -6.14 | 1.49 | 0.41 | 0.75 | 2.77 | 2064 | 258 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DWV | 30887 | 2023-12-07 | 2021-01-18 | 3.07 | 2.95 | — | 3.6 | 0.007 | 0.80 | 0.0 | 0.06 | 14.69 | 0.00 | 2.258 | 16.67 | 0.00 | 26.8 | 73.2 | 0.0 | -7.45 | 0.41 | 0.75 | 4.09 | 4.1 | 0.004 | 0.72 | 0.0 | 0.05 | 17.18 | 0.00 | 2.182 | 17.15 | 1.19 | 22.4 | 77.6 | 0.0 | -6.08 | 1.50 | 0.41 | 0.75 | 2.54 | 2064 | 258 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8H40 | 34476 | 2024-02-22 | 2022-10-09 | 3.6 | 4.14 | 3.56 | 3.3 | 0.059 | 3.51 | 163.0 | 0.18 | 20.66 | 0.02 | 0.727 | 175.67 | 4.55 | 35.8 | 60.4 | 3.8 | -7.43 | 0.85 | 0.79 | 0.76 | 3.3 | 0.004 | 0.94 | 0.0 | 0.05 | 20.72 | 0.01 | 1.897 | 22.17 | 3.19 | 11.8 | 87.6 | 0.6 | -2.66 | 1.95 | 0.87 | 0.81 | 0.98 | 34833 | 4130 | 11 | 120 | 0 | 0 | 0 | logfile |
✔ | 8H40 | 34476 | 2023-12-16 | 2022-10-09 | 3.6 | 4.14 | 3.56 | 3.3 | 0.059 | 3.51 | 163.0 | 0.18 | 20.66 | 0.02 | 0.727 | 175.67 | 4.55 | 35.8 | 60.4 | 3.8 | -7.43 | 0.85 | 0.79 | 0.76 | 3.3 | 0.004 | 0.92 | 0.0 | 0.05 | 20.67 | 0.01 | 1.897 | 21.40 | 0.48 | 12.1 | 87.3 | 0.6 | -2.64 | 1.94 | 0.87 | 0.81 | 0.95 | 34833 | 4130 | 11 | 120 | 0 | 0 | 0 | logfile |
✔ | 8H40 | 34476 | 2024-03-22 | 2022-10-09 | 3.6 | 4.14 | 3.56 | 3.3 | 0.059 | 3.51 | 163.0 | 0.18 | 20.66 | 0.02 | 0.727 | 175.67 | 4.55 | 35.8 | 60.4 | 3.8 | -7.43 | 0.85 | 0.79 | 0.76 | 3.3 | 0.004 | 0.94 | 0.0 | 0.05 | 20.72 | 0.01 | 1.897 | 22.17 | 3.19 | 11.8 | 87.6 | 0.6 | -2.66 | 1.95 | 0.87 | 0.81 | 0.98 | 34833 | 4130 | 11 | 120 | 0 | 0 | 0 | logfile |
✔ | 8H40 | 34476 | 2024-04-15 | 2022-10-09 | 3.6 | 4.14 | 3.56 | 3.3 | 0.059 | 3.51 | 163.0 | 0.18 | 20.66 | 0.02 | 0.727 | 175.67 | 4.55 | 35.8 | 60.4 | 3.8 | -7.43 | 0.85 | 0.79 | 0.76 | 3.3 | 0.004 | 0.94 | 0.0 | 0.05 | 20.72 | 0.01 | 1.897 | 22.17 | 3.19 | 11.8 | 87.6 | 0.6 | -2.66 | 1.95 | 0.87 | 0.81 | 0.98 | 34833 | 4130 | 11 | 120 | 0 | 0 | 0 | logfile |
✔ | 7CYE | 30498 | 2024-04-06 | 2020-09-03 | 3.54 | 3.31 | — | 3.7 | 0.010 | 1.42 | 0.0 | 0.07 | 12.31 | 0.01 | 2.232 | 4.09 | 1.30 | 12.4 | 87.0 | 0.6 | -7.38 | 0.56 | 0.76 | 2.20 | 3.7 | 0.003 | 0.88 | 0.0 | 0.04 | 15.07 | 0.01 | 2.129 | 8.05 | 2.86 | 10.5 | 89.5 | 0.0 | -2.42 | 0.83 | 0.59 | 0.81 | 2.19 | 7263 | 978 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CYE | 30498 | 2023-12-08 | 2020-09-03 | 3.54 | 3.31 | — | 3.7 | 0.010 | 1.42 | 0.0 | 0.07 | 12.31 | 0.01 | 2.232 | 4.09 | 1.30 | 12.4 | 87.0 | 0.6 | -7.38 | 0.56 | 0.76 | 2.20 | 3.7 | 0.003 | 0.89 | 0.0 | 0.04 | 14.85 | 0.01 | 2.091 | 7.04 | 0.26 | 10.5 | 89.5 | 0.0 | -2.91 | 0.86 | 0.60 | 0.81 | 2.82 | 7263 | 978 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CYE | 30498 | 2023-11-14 | 2020-09-03 | 3.54 | 3.31 | — | 3.7 | 0.010 | 1.42 | 0.0 | 0.07 | 12.31 | 0.01 | 2.232 | 4.09 | 1.30 | 12.4 | 87.0 | 0.6 | -7.38 | 0.56 | 0.76 | 2.20 | 3.7 | 0.003 | 0.89 | 0.0 | 0.04 | 14.85 | 0.01 | 2.091 | 7.04 | 0.26 | 10.5 | 89.5 | 0.0 | -2.91 | 0.86 | 0.60 | 0.81 | 2.82 | 7263 | 978 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CYE | 30498 | 2024-02-13 | 2020-09-03 | 3.54 | 3.31 | — | 3.7 | 0.010 | 1.42 | 0.0 | 0.07 | 12.31 | 0.01 | 2.232 | 4.09 | 1.30 | 12.4 | 87.0 | 0.6 | -7.38 | 0.56 | 0.76 | 2.20 | 3.7 | 0.003 | 0.88 | 0.0 | 0.04 | 15.07 | 0.01 | 2.129 | 8.05 | 2.86 | 10.5 | 89.5 | 0.0 | -2.42 | 0.83 | 0.59 | 0.81 | 2.19 | 7263 | 978 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CYE | 30498 | 2024-03-11 | 2020-09-03 | 3.54 | 3.31 | — | 3.7 | 0.010 | 1.42 | 0.0 | 0.07 | 12.31 | 0.01 | 2.232 | 4.09 | 1.30 | 12.4 | 87.0 | 0.6 | -7.38 | 0.56 | 0.76 | 2.20 | 3.7 | 0.003 | 0.88 | 0.0 | 0.04 | 15.07 | 0.01 | 2.129 | 8.05 | 2.86 | 10.5 | 89.5 | 0.0 | -2.42 | 0.83 | 0.59 | 0.81 | 2.19 | 7263 | 978 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CYE | 30498 | 2023-07-04 | 2020-09-03 | 3.54 | 3.31 | — | 3.7 | 0.010 | 1.42 | 0.0 | 0.07 | 12.31 | 0.01 | 2.232 | 4.09 | 1.30 | 12.4 | 87.0 | 0.6 | -7.38 | 0.56 | 0.76 | 2.20 | 3.7 | 0.003 | 0.89 | 0.0 | 0.04 | 14.85 | 0.01 | 2.091 | 7.04 | 0.26 | 10.5 | 89.5 | 0.0 | -2.91 | 0.86 | 0.60 | 0.81 | 2.82 | 7263 | 978 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CYE | 30498 | 2023-09-28 | 2020-09-03 | 3.54 | 3.31 | — | 3.7 | 0.010 | 1.42 | 0.0 | 0.07 | 12.31 | 0.01 | 2.232 | 4.09 | 1.30 | 12.4 | 87.0 | 0.6 | -7.38 | 0.56 | 0.76 | 2.20 | 3.7 | 0.003 | 0.89 | 0.0 | 0.04 | 14.85 | 0.01 | 2.091 | 7.04 | 0.26 | 10.5 | 89.5 | 0.0 | -2.91 | 0.86 | 0.60 | 0.81 | 2.82 | 7263 | 978 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CYE | 30498 | 2024-01-18 | 2020-09-03 | 3.54 | 3.31 | — | 3.7 | 0.010 | 1.42 | 0.0 | 0.07 | 12.31 | 0.01 | 2.232 | 4.09 | 1.30 | 12.4 | 87.0 | 0.6 | -7.38 | 0.56 | 0.76 | 2.20 | 3.7 | 0.003 | 0.88 | 0.0 | 0.04 | 15.07 | 0.01 | 2.129 | 8.05 | 2.86 | 10.5 | 89.5 | 0.0 | -2.42 | 0.83 | 0.59 | 0.81 | 2.19 | 7263 | 978 | 3 | 0 | 0 | 0 | 0 | logfile |