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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7TMR | 26000 | 2024-01-18 | 2022-01-19 | 3.5 | 3.65 | — | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 12.90 | 0.00 | 2.124 | 12.17 | 0.12 | 3.3 | 96.7 | 0.0 | 1.40 | 0.75 | 0.79 | 2.12 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 15.45 | 0.00 | 2.056 | 13.63 | 3.71 | 3.3 | 96.7 | 0.0 | 1.08 | 1.26 | 0.76 | 0.79 | 1.76 | 57795 | 8224 | 32 | 0 | 1 | 0 | 0 | logfile |
✔ | 6J0M | 9764 | 2024-01-19 | 2018-12-24 | 3.9 | 3.79 | — | 3.8 | 0.007 | 0.98 | 0.0 | 0.06 | 15.91 | 0.01 | 2.282 | 6.73 | 0.87 | 5.2 | 94.8 | 0.0 | -4.05 | 0.52 | 0.82 | 1.83 | 3.8 | 0.003 | 0.66 | 0.0 | 0.04 | 18.09 | 0.00 | 2.213 | 12.79 | 5.93 | 6.1 | 93.9 | 0.0 | -2.30 | 1.28 | 0.52 | 0.82 | 1.60 | 12585 | 1605 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KA3 | 22757 | 2024-01-19 | 2020-09-29 | 3.3 | 3.20 | — | 3.4 | 0.004 | 0.76 | 0.0 | 0.04 | 13.66 | 0.01 | 2.294 | 3.99 | 0.36 | 2.9 | 97.1 | 0.0 | -2.21 | 0.76 | 0.82 | 1.82 | 3.3 | 0.003 | 0.54 | 0.0 | 0.04 | 15.64 | 0.00 | 2.190 | 6.88 | 1.98 | 3.7 | 96.3 | 0.0 | 1.91 | 0.48 | 0.77 | 0.84 | 1.18 | 10472 | 1372 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 6Y5V | 10704 | 2024-01-20 | 2020-02-25 | 4.08 | 4.18 | 4.07 | 4.2 | 0.004 | 0.68 | 0.0 | 0.05 | 12.75 | 0.00 | 2.232 | 7.39 | 0.29 | 4.0 | 96.0 | 0.0 | -2.25 | 0.65 | 0.84 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13400 | 1758 | 6 | 0 | 8 | 0 | 0 | logfile |
✔ | 6o1V | 0606 | 2024-01-18 | 2019-02-21 | 3.2 | 3.50 | — | 3.6 | 0.014 | 1.79 | 0.0 | 0.08 | 13.83 | 0.01 | 1.933 | 6.31 | 0.48 | 4.7 | 95.3 | 0.0 | -2.71 | 0.46 | 0.70 | 3.04 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.02 | 0.00 | 1.927 | 7.02 | 2.71 | 2.1 | 97.9 | 0.0 | 0.99 | 1.22 | 0.56 | 0.80 | 2.43 | 9711 | 1179 | 3 | 0 | 28 | 0 | 0 | logfile |
✔ | 6CNo | 7539 | 2024-01-20 | 2018-03-08 | 4.7 | 4.91 | — | 4.8 | 0.006 | 1.03 | 0.0 | 0.05 | 9.24 | 0.01 | 1.936 | 5.57 | 0.26 | 3.5 | 96.5 | 0.0 | -2.70 | 0.64 | 0.79 | — | 4.8 | 0.033 | 0.96 | 0.0 | 0.04 | 12.35 | 0.01 | 1.998 | 31.87 | 0.00 | 3.0 | 97.0 | 0.0 | 0.12 | 1.24 | 0.63 | 0.78 | — | 15428 | 2024 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 7oo8 | 13007 | 2024-01-20 | 2021-05-26 | 3.7 | 2.99 | 3.39 | 3.0 | 0.003 | 0.40 | 0.0 | 0.04 | 9.89 | 0.00 | 2.286 | 6.45 | 0.00 | 1.9 | 98.1 | 0.0 | 2.79 | 0.65 | 0.79 | 2.44 | 3.0 | 0.003 | 0.49 | 0.0 | 0.04 | 14.67 | 0.00 | 2.274 | 10.31 | 2.30 | 1.4 | 98.6 | 0.0 | 2.50 | 0.42 | 0.65 | 0.79 | 2.17 | 13923 | 1827 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZJ8 | 14744 | 2024-01-19 | 2022-04-08 | 3.1 | 2.96 | 3.14 | 3.1 | 0.014 | 1.87 | 0.0 | 0.10 | 18.32 | 0.02 | 1.471 | 1.49 | 0.23 | 5.3 | 94.7 | 0.0 | -2.59 | 0.80 | 0.87 | 3.61 | 3.1 | 0.003 | 0.61 | 0.0 | 0.04 | 15.17 | 0.00 | 2.270 | 3.30 | 1.31 | 1.2 | 98.8 | 0.0 | 0.09 | 1.21 | 0.81 | 0.86 | 3.14 | 12342 | 1482 | 18 | 0 | 51 | 0 | 0 | logfile |
✔ | 7KA4 | 22758 | 2024-01-19 | 2020-09-29 | 2.8 | 2.81 | — | 2.8 | 0.005 | 0.89 | 0.0 | 0.05 | 14.06 | 0.01 | 2.372 | 4.23 | 3.96 | 3.2 | 96.8 | 0.0 | -2.20 | 0.77 | 0.82 | 2.71 | 2.9 | 0.004 | 0.60 | 0.0 | 0.04 | 15.61 | 0.00 | 2.152 | 9.07 | 3.06 | 4.4 | 95.6 | 0.0 | 1.49 | 1.41 | 0.78 | 0.84 | 1.71 | 10472 | 1372 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oVB | 13083 | 2024-01-19 | 2021-06-14 | 3.61 | 4.01 | — | 3.9 | 0.013 | 1.13 | 0.0 | 0.06 | 15.02 | 0.01 | 1.960 | 22.05 | 0.09 | 11.6 | 88.4 | 0.0 | -4.16 | 0.79 | 0.81 | 2.01 | 3.9 | 0.003 | 0.61 | 0.0 | 0.04 | 16.39 | 0.00 | 2.186 | 10.72 | 1.77 | 3.5 | 96.5 | 0.0 | -0.89 | 0.45 | 0.78 | 0.78 | 1.21 | 10854 | 1405 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 7AGG | 11779 | 2024-01-18 | 2020-09-22 | 3.3 | 3.68 | — | 3.6 | 0.007 | 0.79 | 0.0 | 0.05 | 13.16 | 0.01 | 1.980 | 6.95 | 0.00 | 4.2 | 95.8 | 0.0 | -1.18 | 0.83 | 0.80 | 3.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8252 | 1056 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6S7P | 10111 | 2024-01-18 | 2019-07-05 | 3.2 | 3.38 | — | 3.4 | 0.009 | 1.13 | 0.0 | 0.08 | 11.28 | 0.01 | 2.085 | 3.44 | 0.33 | 2.8 | 97.2 | 0.0 | -3.03 | 0.65 | 0.83 | 4.30 | 3.4 | 0.003 | 0.53 | 0.0 | 0.04 | 13.95 | 0.00 | 1.941 | 5.67 | 2.39 | 1.8 | 98.2 | 0.0 | 1.07 | 0.53 | 0.64 | 0.85 | 2.56 | 9028 | 1128 | 1 | 0 | 11 | 0 | 0 | logfile |
✔ | 7K6Q | 22692 | 2024-01-20 | 2020-09-21 | 3.1 | 3.63 | 3.21 | 3.5 | 0.006 | 0.78 | 0.0 | 0.04 | 24.80 | 0.01 | 2.108 | 3.36 | 0.00 | 2.3 | 97.7 | 0.0 | 1.37 | 0.81 | 0.80 | 3.65 | 3.5 | 0.003 | 0.54 | 0.0 | 0.03 | 25.83 | 0.00 | 2.100 | 9.70 | 1.01 | 3.4 | 96.6 | 0.0 | 1.28 | 0.36 | 0.81 | 0.82 | 2.78 | 15578 | 1229 | 13 | 292 | 1 | 0 | 0 | logfile |
✔ | 8HBV | 34644 | 2024-01-17 | 2022-10-31 | 2.51 | 2.70 | 2.51 | 2.7 | 0.009 | 0.96 | 0.0 | 0.05 | 15.84 | 0.01 | 2.209 | 8.10 | 0.00 | 2.0 | 98.0 | 0.0 | 1.54 | 0.61 | 0.88 | 4.41 | 2.7 | 0.003 | 0.53 | 0.0 | 0.04 | 17.02 | 0.00 | 2.204 | 7.03 | 1.78 | 2.2 | 97.8 | 0.0 | 2.61 | 0.92 | 0.61 | 0.89 | 3.96 | 3279 | 414 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 8DTM | 27705 | 2024-01-19 | 2022-07-26 | 3.5 | 3.58 | 3.45 | 3.6 | 0.003 | 0.56 | 0.0 | 0.04 | 16.33 | 0.00 | 2.132 | 7.74 | 0.41 | 5.8 | 94.2 | 0.0 | -0.79 | 0.71 | 0.80 | 2.96 | 3.6 | 0.003 | 0.52 | 0.0 | 0.04 | 16.91 | 0.00 | 2.145 | 7.19 | 2.33 | 5.6 | 94.4 | 0.0 | -0.57 | 0.23 | 0.71 | 0.81 | 2.67 | 6498 | 802 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NH9 | 12321 | 2024-01-20 | 2021-02-10 | 3.03 | 3.58 | — | 3.4 | 0.007 | 0.80 | 0.0 | 0.04 | 14.80 | 0.00 | 2.236 | 12.71 | 3.31 | 11.7 | 88.3 | 0.0 | -2.35 | 0.75 | 0.84 | 2.46 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 15.85 | 0.00 | 2.267 | 11.60 | 1.03 | 9.2 | 90.8 | 0.0 | 1.15 | 0.50 | 0.75 | 0.85 | 2.31 | 13120 | 1635 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Uo5 | 26640 | 2024-01-20 | 2022-04-12 | 3.1 | 3.62 | 3.02 | 3.0 | 0.015 | 2.22 | 0.0 | 0.12 | 31.27 | 0.06 | 2.328 | 2.33 | 1.02 | 6.4 | 92.7 | 0.9 | -2.73 | 0.80 | 0.60 | 3.19 | 3.0 | 0.005 | 0.83 | 0.0 | 0.05 | 30.11 | 0.01 | 1.789 | 34.52 | 3.06 | 16.4 | 82.7 | 0.9 | -3.65 | 1.53 | 0.81 | 0.66 | 1.42 | 13979 | 112 | 2 | 373 | 7 | 0 | 5024 | logfile |
✔ | 7JYi | 22526 | 2024-01-18 | 2020-08-30 | 3.4 | 3.52 | — | 3.5 | 0.008 | 0.75 | 0.0 | 0.05 | 16.05 | 0.00 | 2.104 | 14.16 | 5.45 | 10.3 | 89.2 | 0.5 | -4.54 | 0.43 | 0.84 | 2.04 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 16.84 | 0.00 | 2.120 | 8.24 | 4.40 | 8.1 | 91.9 | 0.0 | -1.68 | 0.64 | 0.40 | 0.85 | 2.13 | 8807 | 1152 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CNM | 7537 | 2024-01-19 | 2018-03-08 | 3.4 | 3.51 | — | 3.5 | 0.010 | 1.11 | 0.0 | 0.06 | 14.65 | 0.01 | 2.331 | 1.47 | 0.00 | 4.3 | 95.7 | 0.0 | -4.29 | 0.64 | 0.84 | 3.41 | 3.4 | 0.003 | 0.53 | 0.0 | 0.04 | 13.64 | 0.00 | 2.201 | 3.51 | 3.20 | 3.3 | 96.7 | 0.0 | 1.90 | 0.55 | 0.64 | 0.85 | 2.18 | 12541 | 1700 | 12 | 0 | 17 | 0 | 0 | logfile |
✔ | 8HFC | 34717 | 2024-01-17 | 2022-11-10 | 3.5 | 3.66 | 3.42 | 3.7 | 0.007 | 0.67 | 0.0 | 0.05 | 18.01 | 0.00 | 2.164 | 9.17 | 3.88 | 6.5 | 93.3 | 0.2 | -2.90 | 0.68 | 0.82 | 2.21 | 3.7 | 0.002 | 0.59 | 0.0 | 0.04 | 18.02 | 0.00 | 2.189 | 5.52 | 2.97 | 4.0 | 96.0 | 0.0 | 0.17 | 1.19 | 0.64 | 0.80 | 2.11 | 4007 | 498 | 3 | 0 | 3 | 0 | 0 | logfile |