The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5XY3 | 6784 | 2024-01-17 | 2017-07-06 | 3.2 | 3.24 | — | 3.2 | 0.006 | 1.04 | 7.0 | 0.09 | 21.80 | 0.00 | 1.123 | 6.22 | 3.45 | 6.0 | 92.7 | 1.3 | -3.33 | 0.61 | 0.76 | 2.54 | 3.2 | 0.008 | 0.78 | 1.0 | 0.05 | 21.51 | 0.01 | 1.893 | 7.76 | 4.32 | 6.4 | 93.1 | 0.4 | -1.44 | 0.55 | 0.78 | 0.86 | 2.24 | 107145 | 5917 | 43 | 2815 | 0 | 0 | 0 | logfile |
✔ | 7V27 | 31638 | 2024-01-17 | 2021-08-07 | 4.18 | 4.43 | — | 4.2 | 0.002 | 0.54 | 0.0 | 0.04 | 11.75 | 0.00 | 2.229 | 9.54 | 0.00 | 9.2 | 90.8 | 0.0 | -4.40 | 0.85 | 0.80 | — | 4.2 | 0.004 | 0.70 | 0.0 | 0.05 | 12.04 | 0.00 | 2.152 | 20.34 | 0.00 | 11.1 | 88.9 | 0.0 | -2.53 | 0.76 | 0.86 | 0.82 | — | 3252 | 421 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 6TAT | 10427 | 2024-01-17 | 2019-10-30 | 3.7 | 2.79 | — | 2.9 | 0.005 | 0.91 | 0.0 | 0.05 | 15.56 | 0.01 | 0.562 | 5.86 | 0.68 | 6.8 | 93.2 | 0.0 | -4.23 | 0.61 | 0.78 | 2.00 | 2.9 | 0.003 | 0.58 | 0.0 | 0.04 | 18.18 | 0.01 | 2.270 | 6.00 | 1.62 | 5.8 | 94.2 | 0.0 | 0.31 | 0.56 | 0.61 | 0.78 | 1.33 | 6790 | 820 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WH8 | 32497 | 2024-01-17 | 2021-12-30 | 3.11 | 3.31 | — | 3.2 | 0.004 | 0.71 | 1.0 | 0.05 | 14.34 | 0.01 | 2.233 | 11.28 | 2.61 | 8.6 | 91.0 | 0.4 | -2.16 | 0.70 | 0.79 | 3.20 | 3.3 | 0.004 | 0.66 | 0.0 | 0.05 | 15.74 | 0.00 | 2.166 | 7.31 | 2.78 | 8.6 | 91.4 | 0.0 | -1.31 | 1.18 | 0.70 | 0.82 | 3.34 | 5479 | 715 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oNT | 17000 | 2024-01-17 | 2023-04-03 | 3.66 | 3.95 | 3.45 | 3.9 | 0.006 | 0.67 | 0.0 | 0.04 | 16.92 | 0.01 | 1.908 | 33.89 | 0.87 | 6.7 | 93.3 | 0.0 | 1.63 | 0.63 | 0.79 | 0.81 | 3.9 | 0.003 | 0.54 | 0.0 | 0.04 | 16.01 | 0.00 | 2.078 | 8.10 | 2.83 | 5.8 | 94.2 | 0.0 | 1.86 | 0.32 | 0.63 | 0.78 | 0.72 | 4316 | 558 | 3 | 0 | 1 | 1 | 0 | logfile |
✔ | 7X8W | 33059 | 2024-01-17 | 2022-03-15 | 3.1 | 3.76 | 3.14 | 3.6 | 0.004 | 0.60 | 0.0 | 0.05 | 16.29 | 0.00 | 2.257 | 4.44 | 0.00 | 5.8 | 94.2 | 0.0 | -1.35 | 0.73 | 0.85 | 4.31 | 3.6 | 0.002 | 0.49 | 0.0 | 0.04 | 15.45 | 0.00 | 2.157 | 5.47 | 1.37 | 4.4 | 95.6 | 0.0 | -1.00 | 0.90 | 0.70 | 0.82 | 4.43 | 6674 | 435 | 5 | 0 | 8 | 0 | 3214 | logfile |
✔ | 7X8Z | 33061 | 2024-01-17 | 2022-03-15 | 4.1 | 4.99 | 4.12 | 4.4 | 0.003 | 0.58 | 0.0 | 0.04 | 13.98 | 0.00 | 2.078 | 11.39 | 0.00 | 12.6 | 87.1 | 0.2 | -2.94 | 0.80 | 0.68 | — | 4.4 | 0.003 | 0.59 | 0.0 | 0.04 | 13.82 | 0.01 | 2.063 | 12.62 | 0.00 | 12.4 | 87.6 | 0.0 | -2.65 | 0.87 | 0.82 | 0.78 | — | 6480 | 426 | 4 | 0 | 1 | 0 | 3147 | logfile |
✔ | 7X92 | 33064 | 2024-01-17 | 2022-03-15 | 4.1 | 5.14 | 4.05 | 4.5 | 0.005 | 0.74 | 1.0 | 0.06 | 17.17 | 0.01 | 2.106 | 12.50 | 0.27 | 14.5 | 85.5 | 0.0 | -2.53 | 0.77 | 0.69 | — | 4.5 | 0.003 | 0.64 | 0.0 | 0.05 | 13.31 | 0.00 | 1.996 | 17.69 | 0.00 | 14.3 | 85.2 | 0.5 | -2.85 | 1.22 | 0.77 | 0.75 | — | 6529 | 426 | 4 | 0 | 2 | 0 | 3171 | logfile |
✔ | 7KPW | 22990 | 2024-01-17 | 2020-11-12 | 4.9 | 5.04 | 4.74 | 4.9 | 0.009 | 1.54 | 4.0 | 0.10 | 1.89 | 0.01 | 2.279 | 3.61 | 0.00 | 3.9 | 94.9 | 1.2 | 4.09 | 0.75 | 0.67 | — | 4.9 | 0.003 | 0.73 | 0.0 | 0.04 | 5.85 | 0.00 | 2.148 | 2.79 | 0.00 | 11.5 | 87.9 | 0.6 | -0.50 | 2.04 | 0.82 | 0.82 | — | 4313 | 865 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7X8Y | 33060 | 2024-01-17 | 2022-03-15 | 4.1 | 5.59 | 4.09 | 4.4 | 0.003 | 0.53 | 0.0 | 0.04 | 14.08 | 0.00 | 1.988 | 7.11 | 0.00 | 9.0 | 91.0 | 0.0 | -3.09 | 0.77 | 0.65 | — | 4.5 | 0.003 | 0.57 | 0.0 | 0.04 | 13.48 | 0.00 | 1.967 | 11.41 | 0.00 | 10.8 | 89.2 | 0.0 | -2.25 | 0.97 | 0.80 | 0.75 | — | 6731 | 440 | 4 | 0 | 1 | 0 | 3296 | logfile |
✔ | 7FCi | 31526 | 2024-01-17 | 2021-07-14 | 3.3 | 3.20 | 3.10 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 16.43 | 0.01 | 2.250 | 7.53 | 4.55 | 3.6 | 96.4 | 0.0 | 0.59 | 0.52 | 0.76 | 2.38 | 3.4 | 0.004 | 0.62 | 0.0 | 0.04 | 16.49 | 0.00 | 2.253 | 7.62 | 3.92 | 3.6 | 96.4 | 0.0 | 0.51 | 0.25 | 0.67 | 0.86 | 2.51 | 5613 | 734 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QPW | 4616 | 2024-01-17 | 2019-02-15 | 3.3 | 3.57 | — | 3.6 | 0.005 | 0.99 | 0.0 | 0.06 | 16.13 | 0.01 | 2.122 | 5.83 | 0.14 | 5.0 | 95.0 | 0.0 | -3.55 | 0.70 | 0.75 | 3.06 | 3.6 | 0.005 | 0.70 | 0.0 | 0.05 | 17.79 | 0.00 | 2.023 | 15.27 | 4.92 | 6.4 | 93.6 | 0.0 | -0.88 | 1.08 | 0.72 | 0.79 | 2.36 | 6784 | 839 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 7AKV | 11814 | 2024-01-17 | 2020-10-02 | 3.6 | 3.04 | 3.41 | 3.7 | 0.004 | 0.65 | 0.0 | 0.04 | 14.25 | 0.00 | 2.005 | 76.42 | 0.16 | 17.7 | 82.2 | 0.1 | -4.19 | 0.81 | 0.82 | 2.44 | 3.7 | 0.003 | 0.55 | 0.0 | 0.04 | 16.02 | 0.00 | 2.039 | 71.21 | 3.41 | 13.5 | 86.4 | 0.1 | -3.06 | 0.85 | 0.81 | 0.82 | 1.88 | 6201 | 799 | 2 | 0 | 0 | 0 | 245 | logfile |
✔ | 8A64 | 15205 | 2024-01-17 | 2022-06-16 | 4.6 | 7.63 | 4.66 | 4.6 | 0.008 | 0.86 | 0.0 | 0.06 | 10.17 | 0.01 | 2.112 | 20.40 | 0.00 | 5.8 | 94.2 | 0.0 | -1.55 | 0.91 | 0.78 | — | 4.6 | 0.003 | 0.66 | 0.0 | 0.04 | 5.25 | 0.00 | 2.057 | 16.59 | 0.00 | 8.8 | 91.2 | 0.0 | -0.64 | 1.80 | 0.91 | 0.78 | — | 6737 | 1354 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 7DXi | 30910 | 2024-01-17 | 2021-01-19 | 3.53 | 3.60 | — | 3.6 | 0.006 | 1.30 | 0.0 | 0.06 | 15.06 | 0.01 | 1.468 | 4.71 | 0.30 | 13.9 | 85.5 | 0.6 | -5.04 | 0.73 | 0.81 | 3.68 | 3.6 | 0.003 | 0.77 | 0.0 | 0.04 | 16.65 | 0.01 | 2.187 | 10.42 | 2.83 | 13.9 | 86.1 | 0.0 | -2.30 | 0.46 | 0.73 | 0.81 | 2.69 | 6130 | 742 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7E1E | 30939 | 2024-01-17 | 2021-02-01 | 3.34 | 3.41 | — | 3.4 | 0.007 | 0.86 | 0.0 | 0.05 | 17.66 | 0.01 | 2.154 | 11.52 | 11.79 | 9.0 | 90.6 | 0.4 | -3.79 | 0.53 | 0.77 | 2.15 | 3.3 | 0.005 | 0.78 | 0.0 | 0.05 | 16.96 | 0.01 | 2.112 | 12.71 | 4.51 | 7.8 | 91.5 | 0.7 | -2.18 | 1.49 | 0.57 | 0.84 | 2.99 | 6489 | 837 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 7X91 | 33063 | 2024-01-17 | 2022-03-15 | 4.3 | 5.81 | 4.21 | 4.4 | 0.003 | 0.63 | 0.0 | 0.05 | 14.40 | 0.00 | 2.120 | 11.23 | 0.00 | 10.7 | 89.3 | 0.0 | -2.69 | 0.81 | 0.73 | — | 4.5 | 0.003 | 0.62 | 0.0 | 0.04 | 12.88 | 0.00 | 2.037 | 17.91 | 0.00 | 13.5 | 86.5 | 0.0 | -1.77 | 0.90 | 0.82 | 0.77 | — | 6559 | 427 | 4 | 0 | 2 | 0 | 3196 | logfile |
✔ | 7YNo | 33967 | 2024-01-17 | 2022-07-31 | 2.8 | 2.92 | 2.23 | 3.1 | 0.008 | 0.79 | 0.0 | 0.05 | 12.19 | 0.00 | 2.252 | 22.12 | 0.00 | 7.3 | 92.7 | 0.0 | -3.47 | 0.41 | 0.77 | 5.69 | 3.1 | 0.003 | 0.67 | 0.0 | 0.05 | 14.57 | 0.00 | 2.263 | 8.01 | 1.94 | 2.5 | 97.5 | 0.0 | -2.04 | 0.36 | 0.42 | 0.79 | 4.68 | 2562 | 366 | 8 | 0 | 2 | 0 | 0 | logfile |
✔ | 7PDH | 13338 | 2024-01-17 | 2021-08-05 | 4.0 | 3.51 | — | 3.2 | 0.003 | 0.70 | 0.0 | 0.04 | 14.16 | 0.00 | 2.169 | 14.32 | 0.00 | 5.8 | 94.2 | 0.0 | -1.07 | 0.79 | 0.69 | — | 3.2 | 0.002 | 0.69 | 0.0 | 0.04 | 16.53 | 0.00 | 2.198 | 13.98 | 2.08 | 6.2 | 93.8 | 0.0 | -0.70 | 0.86 | 0.79 | 0.70 | — | 4516 | 577 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WED | 32447 | 2024-01-17 | 2021-12-23 | 3.5 | 3.62 | — | 3.7 | 0.003 | 0.70 | 0.0 | 0.05 | 13.75 | 0.01 | 2.285 | 7.13 | 0.00 | 8.2 | 91.8 | 0.0 | -1.64 | 0.57 | 0.77 | 2.25 | 3.6 | 0.005 | 1.33 | 1.0 | 0.07 | 16.81 | 0.01 | 2.258 | 8.50 | 4.36 | 7.3 | 92.7 | 0.0 | -1.19 | 1.13 | 0.57 | 0.78 | 1.96 | 3358 | 431 | 3 | 0 | 0 | 0 | 0 | logfile |