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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7PNK | 13548 | 2024-01-18 | 2021-09-07 | 3.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 60673 | 6142 | 74 | 0 | 250 | 0 | 0 | logfile |
✔ | 7YAD | 33709 | 2024-01-17 | 2022-06-27 | 2.66 | 2.45 | 2.92 | 2.2 | 0.003 | 0.55 | 0.0 | 0.04 | 12.51 | 0.00 | 2.165 | 5.84 | 0.00 | 4.5 | 95.3 | 0.1 | -1.22 | 0.71 | 0.77 | 3.55 | 2.2 | 0.003 | 0.59 | 0.0 | 0.04 | 14.79 | 0.00 | 2.176 | 6.52 | 2.65 | 4.9 | 94.9 | 0.2 | -1.13 | 2.15 | 0.74 | 0.81 | 3.00 | 6728 | 848 | 8 | 0 | 6 | 0 | 0 | logfile |
✔ | 7YA0 | 33698 | 2024-01-18 | 2022-06-26 | 3.1 | 3.62 | 3.66 | 3.3 | 0.003 | 0.68 | 0.0 | 0.05 | 14.04 | 0.00 | 2.001 | 9.13 | 0.19 | 5.5 | 94.2 | 0.3 | -0.72 | 0.75 | 0.78 | 1.83 | 3.3 | 0.003 | 0.62 | 0.0 | 0.04 | 15.12 | 0.00 | 2.122 | 10.05 | 1.07 | 5.9 | 94.0 | 0.1 | -0.42 | 0.40 | 0.75 | 0.82 | 1.76 | 39996 | 4917 | 27 | 0 | 66 | 0 | 0 | logfile |
✔ | 6X6K | 22076 | 2024-01-18 | 2020-05-28 | 3.1 | 3.22 | — | 3.2 | 0.011 | 1.23 | 2.0 | 0.07 | 13.77 | 0.01 | 2.210 | 8.21 | 0.00 | 5.5 | 94.5 | 0.0 | -1.94 | 0.69 | 0.84 | 2.88 | 3.2 | 0.004 | 0.68 | 0.0 | 0.05 | 16.55 | 0.00 | 2.060 | 16.35 | 2.42 | 5.4 | 94.6 | 0.0 | -0.25 | 0.59 | 0.70 | 0.86 | 2.40 | 60970 | 7602 | 42 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HJR | 0237 | 2024-01-19 | 2018-09-04 | 4.2 | 4.57 | 4.24 | 4.3 | 0.009 | 1.13 | 0.0 | 0.07 | 13.66 | 0.01 | 2.200 | 6.58 | 0.70 | 10.6 | 89.2 | 0.2 | -3.38 | 0.84 | 0.88 | — | 4.2 | 0.006 | 0.80 | 0.0 | 0.05 | 12.31 | 0.00 | 2.052 | 14.59 | 0.00 | 11.3 | 88.6 | 0.1 | -1.42 | 0.59 | 0.84 | 0.88 | — | 12579 | 1578 | 19 | 0 | 31 | 0 | 0 | logfile |
✔ | 6RE5 | 4842 | 2024-01-17 | 2019-04-12 | 3.2 | 3.28 | — | 3.3 | 0.010 | 0.94 | 0.0 | 0.06 | 14.50 | 0.01 | 2.163 | 5.75 | 0.27 | 4.8 | 95.0 | 0.2 | -3.94 | 0.72 | 0.85 | 2.85 | 3.3 | 0.003 | 0.58 | 0.0 | 0.04 | 15.82 | 0.00 | 1.927 | 9.50 | 1.99 | 3.7 | 96.2 | 0.1 | 0.24 | 0.45 | 0.71 | 0.86 | 2.23 | 53720 | 7099 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6S8B | 10117 | 2024-01-19 | 2019-07-09 | 2.41 | 3.08 | 2.65 | 3.0 | 0.006 | 0.79 | 0.0 | 0.05 | 14.94 | 0.00 | 1.698 | 17.72 | 0.19 | 15.0 | 84.6 | 0.4 | -4.57 | 0.72 | 0.78 | 2.94 | 3.0 | 0.003 | 0.78 | 0.0 | 0.05 | 17.21 | 0.00 | 2.100 | 14.78 | 2.69 | 11.6 | 88.3 | 0.1 | -2.57 | 1.06 | 0.67 | 0.84 | 2.44 | 62151 | 7479 | 35 | 93 | 6 | 0 | 0 | logfile |
✔ | 8EET | 28057 | 2024-01-17 | 2022-09-07 | 3.1 | 3.36 | 3.21 | 3.4 | 0.007 | 0.92 | 0.0 | 0.06 | 12.42 | 0.00 | 0.312 | 9.93 | 1.07 | 0.5 | 99.5 | 0.0 | 1.87 | 0.72 | 0.82 | 3.55 | 3.4 | 0.036 | 2.63 | 0.0 | 0.28 | 22.74 | 0.00 | 0.540 | 13.15 | 1.66 | 1.3 | 98.7 | 0.0 | 2.02 | 1.33 | 0.68 | 0.83 | 3.02 | 107640 | 13260 | 60 | 0 | 120 | 0 | 0 | logfile |
✔ | 7V4J | 31713 | 2024-01-18 | 2021-08-13 | 3.5 | 3.64 | — | 3.8 | 0.003 | 0.67 | 0.0 | 0.05 | 13.95 | 0.01 | 2.092 | 19.96 | 0.00 | 8.2 | 91.8 | 0.0 | -1.60 | 0.61 | 0.52 | 1.21 | 3.8 | 0.003 | 0.76 | 0.0 | 0.05 | 16.53 | 0.01 | 2.080 | 22.59 | 1.98 | 6.7 | 93.3 | 0.0 | -1.65 | 0.52 | 0.63 | 0.58 | 1.23 | 9850 | 1275 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X64 | 22069 | 2024-01-20 | 2020-05-27 | 3.7 | 4.01 | — | 3.7 | 0.008 | 1.34 | 0.0 | 0.05 | 9.32 | 0.01 | 2.584 | 0.78 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.68 | 0.84 | — | 3.7 | 0.009 | 1.23 | 0.0 | 0.05 | 5.42 | 0.00 | 2.111 | 10.35 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.35 | 0.69 | 0.86 | — | 15840 | 0 | 36 | 0 | 3168 | 0 | 0 | logfile |
✔ | 7Y3G | 33594 | 2024-01-18 | 2022-06-10 | 2.77 | 2.32 | 2.89 | 2.1 | 0.004 | 0.66 | 0.0 | 0.04 | 16.44 | 0.01 | 2.029 | 7.02 | 3.04 | 3.9 | 96.1 | 0.0 | 0.49 | 0.79 | 0.81 | 2.50 | 2.1 | 0.003 | 0.60 | 0.0 | 0.04 | 16.61 | 0.00 | 2.139 | 5.11 | 3.86 | 3.4 | 96.6 | 0.0 | 0.84 | 1.15 | 0.80 | 0.82 | 2.04 | 7864 | 1001 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 7KHR | 22880 | 2024-01-19 | 2020-10-21 | 3.62 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 61913 | 8212 | 44 | 0 | 36 | 0 | 0 | logfile |
✘ | 6S6B | 10102 | 2024-01-20 | 2019-07-02 | 2.75 | 3.35 | 3.07 | 3.2 | 0.005 | 0.76 | 0.0 | 0.05 | 14.86 | 0.00 | 1.961 | 19.06 | 0.15 | 15.3 | 84.3 | 0.4 | -5.13 | 0.77 | 0.82 | 2.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 66914 | 8194 | 39 | 51 | 1 | 0 | 0 | logfile |
✔ | 7SoD | 25267 | 2024-01-17 | 2021-10-29 | 3.2 | 3.43 | 3.21 | 3.4 | 0.011 | 1.24 | 0.0 | 0.08 | 9.17 | 0.01 | 2.129 | 0.40 | 0.49 | 2.4 | 97.6 | 0.0 | 1.01 | 0.70 | 0.86 | 5.20 | 3.4 | 0.005 | 0.59 | 0.0 | 0.05 | 12.44 | 0.00 | 2.288 | 4.13 | 0.74 | 3.3 | 96.7 | 0.0 | 0.88 | 1.53 | 0.69 | 0.91 | 5.54 | 3830 | 473 | 5 | 0 | 7 | 0 | 0 | logfile |
✔ | 6S91 | 10126 | 2024-01-19 | 2019-07-11 | 2.68 | 3.17 | 2.85 | 3.0 | 0.006 | 0.80 | 0.0 | 0.05 | 15.39 | 0.00 | 1.696 | 20.08 | 0.09 | 13.5 | 86.3 | 0.2 | -4.91 | 0.69 | 0.74 | 2.17 | 3.1 | 0.005 | 0.82 | 0.0 | 0.05 | 17.49 | 0.00 | 1.998 | 18.73 | 4.04 | 11.6 | 88.4 | 0.0 | -2.95 | 0.65 | 0.66 | 0.81 | 1.90 | 62045 | 7488 | 36 | 84 | 6 | 0 | 0 | logfile |
✘ | 7JRo | 22447 | 2024-01-19 | 2020-08-12 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12747 | 1492 | 17 | 0 | 26 | 0 | 0 | logfile |
✔ | 7TLZ | 25991 | 2024-01-17 | 2022-01-19 | 3.3 | 3.47 | 3.24 | 3.4 | 0.011 | 1.30 | 0.0 | 0.08 | 9.09 | 0.01 | 2.581 | 0.87 | 0.31 | 2.8 | 97.2 | 0.0 | 1.02 | 0.68 | 0.81 | 5.51 | 3.4 | 0.006 | 0.70 | 0.0 | 0.05 | 12.25 | 0.00 | 2.297 | 4.51 | 0.94 | 4.6 | 95.4 | 0.0 | 0.55 | 1.00 | 0.68 | 0.87 | 5.92 | 3621 | 475 | 3 | 0 | 6 | 0 | 0 | logfile |
✘ | 8FU6 | 29453 | 2024-01-18 | 2023-01-16 | 2.9 | 3.13 | 2.94 | 3.2 | 0.002 | 0.60 | 0.0 | 0.04 | 12.46 | 0.00 | 2.199 | 3.83 | 0.00 | 2.6 | 97.4 | 0.0 | 0.07 | 0.58 | 0.80 | 3.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8834 | 1112 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YKD | 33891 | 2024-01-18 | 2022-07-22 | 2.81 | 3.29 | 2.94 | 3.2 | 0.009 | 0.86 | 0.0 | 0.06 | 14.19 | 0.00 | 2.118 | 15.46 | 0.10 | 5.0 | 95.0 | 0.0 | -0.18 | 0.70 | 0.83 | 4.27 | 3.2 | 0.003 | 0.64 | 0.0 | 0.04 | 15.02 | 0.00 | 2.181 | 9.55 | 2.29 | 3.7 | 96.3 | 0.0 | 0.75 | 0.92 | 0.67 | 0.84 | 3.24 | 8965 | 1133 | 7 | 0 | 5 | 0 | 0 | logfile |
✔ | 7SoC | 25266 | 2024-01-17 | 2021-10-29 | 3.3 | 3.48 | 3.25 | 3.5 | 0.011 | 1.22 | 0.0 | 0.07 | 13.21 | 0.00 | 2.526 | 0.89 | 0.00 | 1.9 | 98.1 | 0.0 | 0.30 | 0.70 | 0.86 | 4.49 | 3.5 | 0.005 | 0.60 | 0.0 | 0.04 | 13.14 | 0.00 | 2.177 | 4.01 | 1.65 | 2.6 | 97.4 | 0.0 | -0.18 | 0.51 | 0.69 | 0.90 | 3.84 | 3448 | 433 | 5 | 0 | 7 | 0 | 0 | logfile |