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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8G1i | 29671 | 2024-01-20 | 2023-02-02 | 3.12 | 2.20 | 3.26 | 2.0 | 0.003 | 0.64 | 0.0 | 0.04 | 21.14 | 0.01 | 1.975 | 7.71 | 1.72 | 6.5 | 93.5 | 0.0 | -1.85 | 0.75 | 0.77 | 2.21 | 1.8 | 0.002 | 0.52 | 0.0 | 0.04 | 20.80 | 0.00 | 2.189 | 5.05 | 2.32 | 4.6 | 95.4 | 0.0 | -0.24 | 0.86 | 0.75 | 0.78 | 1.99 | 13613 | 1298 | 4 | 142 | 0 | 0 | 0 | logfile |
✔ | 7ZLA | 14778 | 2024-01-18 | 2022-04-14 | 3.99 | 4.22 | 3.89 | 4.1 | 0.007 | 0.86 | 0.0 | 0.05 | 21.72 | 0.01 | 2.198 | 18.63 | 0.00 | 6.9 | 93.1 | 0.0 | -1.94 | 0.71 | 0.67 | 0.80 | 4.1 | 0.004 | 0.67 | 0.0 | 0.04 | 22.80 | 0.01 | 2.104 | 14.54 | 3.85 | 6.7 | 93.2 | 0.1 | -1.33 | 0.51 | 0.71 | 0.67 | 1.23 | 8624 | 822 | 4 | 92 | 0 | 0 | 0 | logfile |
✔ | 8EQN | 28540 | 2024-01-17 | 2022-10-08 | 3.7 | 3.82 | 3.76 | 3.8 | 0.019 | 1.63 | 0.0 | 0.09 | 10.32 | 0.01 | 2.390 | 0.43 | 0.00 | 1.3 | 98.7 | 0.0 | 1.44 | 0.79 | 0.86 | 3.46 | 3.7 | 0.004 | 0.67 | 0.0 | 0.05 | 15.62 | 0.00 | 2.110 | 9.74 | 2.89 | 2.7 | 97.3 | 0.0 | 1.82 | 0.87 | 0.79 | 0.87 | 2.63 | 107700 | 13980 | 60 | 0 | 0 | 0 | 0 | logfile |
✘ | 8DK5 | 27483 | 2024-01-20 | 2022-07-02 | 2.71 | 3.29 | 2.87 | 3.2 | 0.011 | 1.11 | 3.0 | 0.07 | 27.41 | 0.01 | 2.088 | 9.15 | 0.39 | 4.6 | 95.3 | 0.2 | -0.97 | 0.74 | 0.79 | 3.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15618 | 1210 | 12 | 298 | 0 | 0 | 0 | logfile |
✔ | 7YDM | 33753 | 2024-01-18 | 2022-07-04 | 2.89 | 2.31 | 2.90 | 2.1 | 0.007 | 0.72 | 0.0 | 0.05 | 13.26 | 0.01 | 2.115 | 3.82 | 0.00 | 5.0 | 95.0 | 0.0 | -0.11 | 0.79 | 0.80 | 3.14 | 2.1 | 0.004 | 0.57 | 0.0 | 0.04 | 16.15 | 0.00 | 2.155 | 3.33 | 2.38 | 4.4 | 95.6 | 0.0 | 0.81 | 0.34 | 0.80 | 0.82 | 2.19 | 8131 | 1031 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CLK | 16715 | 2024-01-19 | 2023-02-16 | 3.5 | 3.77 | 3.61 | 3.7 | 0.005 | 0.75 | 0.0 | 0.05 | 13.29 | 0.01 | 2.217 | 4.17 | 0.00 | 2.6 | 97.4 | 0.0 | -1.42 | 0.76 | 0.77 | 2.16 | 3.7 | 0.003 | 0.75 | 0.0 | 0.04 | 15.72 | 0.00 | 2.047 | 13.01 | 1.67 | 2.0 | 98.0 | 0.0 | 0.22 | 1.20 | 0.76 | 0.75 | 1.69 | 10799 | 1344 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XTK | 33451 | 2024-01-17 | 2022-05-17 | 2.89 | 3.27 | 2.92 | 3.2 | 0.004 | 0.87 | 0.0 | 0.04 | 13.37 | 0.01 | 1.873 | 9.37 | 0.00 | 6.4 | 92.3 | 1.3 | -1.05 | 0.59 | 0.83 | 2.77 | 3.2 | 0.003 | 0.63 | 0.0 | 0.04 | 14.86 | 0.00 | 2.156 | 7.65 | 1.47 | 6.1 | 93.1 | 0.8 | 0.95 | 1.72 | 0.57 | 0.83 | 1.91 | 3159 | 395 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CL1 | 16709 | 2024-01-20 | 2023-02-16 | 3.35 | 3.67 | 2.87 | 3.6 | 0.008 | 0.93 | 0.0 | 0.06 | 12.18 | 0.01 | 0.393 | 14.11 | 0.54 | 0.0 | 99.1 | 0.9 | -1.05 | 0.61 | 0.75 | 3.54 | 3.7 | 0.003 | 0.59 | 0.0 | 0.04 | 15.24 | 0.00 | 2.182 | 11.26 | 0.72 | 2.1 | 97.4 | 0.5 | 1.93 | 0.64 | 0.65 | 0.78 | 3.06 | 10494 | 1362 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZW6 | 14993 | 2024-01-18 | 2022-05-18 | 3.7 | 3.96 | 3.76 | 3.7 | 0.003 | 0.53 | 0.0 | 0.04 | 16.90 | 0.00 | 1.934 | 8.56 | 0.31 | 2.7 | 97.3 | 0.0 | 2.29 | 0.78 | 0.59 | 0.31 | 3.7 | 0.002 | 0.48 | 0.0 | 0.03 | 18.10 | 0.00 | 1.945 | 52.39 | 2.64 | 2.9 | 97.1 | 0.0 | 2.68 | 1.95 | 0.83 | 0.71 | 0.47 | 57112 | 6344 | 8 | 0 | 0 | 0 | 6176 | logfile |
✔ | 8CL3 | 16711 | 2024-01-19 | 2023-02-16 | 3.14 | 3.51 | 3.07 | 3.5 | 0.005 | 0.97 | 0.0 | 0.13 | 12.73 | 0.01 | 0.985 | 10.68 | 0.00 | 0.9 | 99.1 | 0.0 | -1.02 | 0.59 | 0.70 | 2.88 | 3.5 | 0.003 | 0.59 | 0.0 | 0.04 | 16.25 | 0.00 | 2.299 | 7.82 | 1.76 | 0.7 | 99.3 | 0.0 | 1.64 | 0.54 | 0.46 | 0.66 | 2.78 | 10272 | 1350 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EVG | 28628 | 2024-01-20 | 2022-10-20 | 2.75 | 3.37 | 2.90 | 3.1 | 0.020 | 2.03 | 0.0 | 0.13 | 28.95 | 0.01 | 1.794 | 13.48 | 0.29 | 2.8 | 97.2 | 0.0 | 1.12 | 0.84 | 0.83 | 2.42 | 3.1 | 0.004 | 0.62 | 0.0 | 0.04 | 27.40 | 0.00 | 2.113 | 8.91 | 2.04 | 3.2 | 96.8 | 0.0 | 1.45 | 1.27 | 0.83 | 0.85 | 2.72 | 15577 | 1212 | 12 | 294 | 0 | 0 | 0 | logfile |
✔ | 7ZXT | 15016 | 2024-01-19 | 2022-05-22 | 2.9 | 3.45 | 2.85 | 3.2 | 0.003 | 0.63 | 0.0 | 0.04 | 12.07 | 0.00 | 2.146 | 8.21 | 0.00 | 3.5 | 96.0 | 0.5 | 3.83 | 0.66 | 0.82 | 1.47 | 3.2 | 0.004 | 0.67 | 0.0 | 0.04 | 15.03 | 0.00 | 2.168 | 7.26 | 2.16 | 4.7 | 94.6 | 0.7 | 3.79 | 0.91 | 0.58 | 0.88 | 1.04 | 9924 | 1236 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EoJ | 28377 | 2024-01-18 | 2022-10-03 | 3.07 | 3.47 | 3.19 | 3.2 | 0.002 | 0.55 | 0.0 | 0.04 | 11.26 | 0.00 | 2.216 | 7.60 | 3.76 | 4.1 | 95.9 | 0.0 | -1.48 | 0.69 | 0.60 | 0.95 | 3.2 | 0.003 | 0.64 | 0.0 | 0.04 | 14.46 | 0.00 | 2.117 | 15.09 | 2.64 | 4.1 | 95.9 | 0.0 | -0.15 | 1.71 | 0.70 | 0.60 | 0.81 | 9327 | 1219 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XoQ | 33356 | 2024-01-17 | 2022-05-01 | 3.3 | 3.58 | 3.06 | 3.4 | 0.003 | 0.54 | 0.0 | 0.04 | 11.31 | 0.00 | 2.277 | 8.56 | 0.00 | 1.0 | 99.0 | 0.0 | 2.13 | 0.56 | 0.85 | 2.21 | 3.4 | 0.002 | 0.52 | 0.0 | 0.04 | 14.45 | 0.00 | 2.347 | 8.04 | 1.24 | 1.0 | 99.0 | 0.0 | 2.53 | 0.38 | 0.58 | 0.87 | 1.52 | 3855 | 524 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DZ5 | 27789 | 2024-01-18 | 2022-08-06 | 3.84 | 4.27 | 3.76 | 4.1 | 0.003 | 0.71 | 0.0 | 0.04 | 15.29 | 0.00 | 2.167 | 12.59 | 0.62 | 5.4 | 94.6 | 0.0 | -0.63 | 0.74 | 0.82 | 2.12 | 4.1 | 0.006 | 0.73 | 0.0 | 0.04 | 16.43 | 0.00 | 2.121 | 16.96 | 4.35 | 8.5 | 91.5 | 0.0 | -1.16 | 1.24 | 0.75 | 0.83 | 1.91 | 8950 | 1155 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TQo | 41510 | 2024-01-19 | 2023-08-08 | 3.1 | 3.83 | 3.25 | 3.7 | 0.002 | 0.54 | 0.0 | 0.04 | 16.86 | 0.00 | 2.202 | 8.77 | 0.16 | 4.5 | 95.5 | 0.0 | 0.14 | 0.76 | 0.83 | 1.75 | 3.7 | 0.002 | 0.55 | 0.0 | 0.04 | 17.14 | 0.00 | 2.210 | 8.36 | 3.33 | 4.7 | 95.3 | 0.0 | 0.61 | 1.01 | 0.71 | 0.80 | 2.49 | 11122 | 1437 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 7XF2 | 33168 | 2024-01-17 | 2022-03-31 | 3.73 | 4.88 | 3.77 | 3.9 | 0.004 | 0.65 | 0.0 | 0.04 | 14.12 | 0.00 | 2.133 | 14.17 | 0.13 | 8.5 | 91.5 | 0.0 | -4.97 | 0.46 | 0.78 | 0.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6591 | 840 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CKV | 16703 | 2024-01-19 | 2023-02-16 | 2.89 | 3.13 | 2.17 | 3.2 | 0.004 | 0.82 | 0.0 | 0.05 | 12.34 | 0.01 | 1.152 | 5.68 | 0.00 | 1.0 | 99.0 | 0.0 | -0.51 | 0.61 | 0.76 | 4.15 | 3.2 | 0.004 | 0.56 | 0.0 | 0.04 | 16.02 | 0.00 | 2.224 | 7.75 | 1.97 | 1.4 | 98.6 | 0.0 | 1.54 | 0.44 | 0.62 | 0.80 | 4.06 | 9900 | 1272 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WLB | 32580 | 2024-01-19 | 2022-01-12 | 4.1 | 3.63 | — | 3.5 | 0.002 | 0.44 | 0.0 | 0.04 | 8.68 | 0.00 | 2.205 | 6.88 | 3.92 | 4.5 | 95.5 | 0.0 | -4.05 | 0.74 | 0.72 | — | 3.4 | 0.004 | 0.71 | 0.0 | 0.04 | 11.24 | 0.00 | 2.157 | 18.00 | 0.00 | 6.4 | 93.5 | 0.1 | -0.65 | 1.45 | 0.75 | 0.75 | — | 10193 | 1327 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JMT | 36426 | 2024-01-17 | 2023-06-05 | 3.3 | 3.55 | 3.41 | 3.7 | 0.003 | 0.74 | 0.0 | 0.04 | 14.38 | 0.00 | 2.204 | 8.56 | 0.00 | 3.5 | 96.5 | 0.0 | -0.01 | 0.35 | 0.59 | 1.38 | 3.7 | 0.004 | 0.60 | 0.0 | 0.04 | 16.44 | 0.00 | 2.245 | 10.12 | 0.99 | 3.5 | 96.5 | 0.0 | 1.56 | 1.17 | 0.32 | 0.60 | 1.22 | 1894 | 234 | 1 | 0 | 0 | 0 | 0 | logfile |