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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6E7C | 8998 | 2024-01-17 | 2018-07-25 | 3.65 | 3.83 | 3.42 | 3.8 | 0.007 | 0.85 | 0.0 | 0.04 | 12.70 | 0.00 | 1.901 | 7.73 | 0.00 | 6.8 | 93.2 | 0.0 | -4.32 | 0.50 | 0.75 | 3.05 | 3.8 | 0.004 | 0.76 | 0.0 | 0.04 | 16.48 | 0.00 | 1.904 | 19.06 | 2.87 | 4.7 | 95.3 | 0.0 | -2.13 | 1.34 | 0.52 | 0.79 | 2.90 | 6780 | 854 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7YPG | 33999 | 2024-01-17 | 2022-08-03 | 2.5 | 2.00 | 2.09 | 3.0 | 0.008 | 0.80 | 0.0 | 0.06 | 14.50 | 0.00 | 2.331 | 9.02 | 0.00 | 12.3 | 87.7 | 0.0 | -5.97 | 0.40 | 0.82 | 3.85 | 3.0 | 0.005 | 0.70 | 0.0 | 0.05 | 17.65 | 0.00 | 2.269 | 12.89 | 5.77 | 11.4 | 88.6 | 0.0 | -5.32 | 0.53 | 0.40 | 0.82 | 3.21 | 2676 | 354 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SS5 | 25404 | 2024-01-17 | 2021-11-09 | 2.7 | 3.48 | 2.63 | 3.2 | 0.003 | 0.63 | 2.0 | 0.05 | 19.81 | 0.00 | 2.179 | 8.80 | 0.00 | 3.1 | 96.9 | 0.0 | 0.76 | 0.51 | 0.75 | 3.88 | 3.2 | 0.003 | 0.64 | 0.0 | 0.04 | 21.72 | 0.00 | 2.113 | 9.38 | 0.89 | 2.8 | 97.2 | 0.0 | 1.81 | 3.21 | 0.51 | 0.87 | 2.59 | 6927 | 676 | 10 | 48 | 6 | 593 | 0 | logfile |
✔ | 6E7B | 8997 | 2024-01-17 | 2018-07-25 | 3.5 | 3.67 | 3.28 | 3.7 | 0.006 | 0.83 | 0.0 | 0.04 | 11.89 | 0.00 | 2.009 | 5.71 | 0.14 | 6.5 | 93.5 | 0.0 | -4.13 | 0.56 | 0.76 | 2.80 | 3.6 | 0.003 | 0.73 | 0.0 | 0.04 | 15.96 | 0.00 | 1.941 | 16.14 | 4.25 | 3.7 | 96.3 | 0.0 | -1.51 | 0.97 | 0.58 | 0.80 | 2.50 | 6774 | 854 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6DLU | 7957 | 2024-01-19 | 2018-06-02 | 3.75 | 3.84 | — | 3.8 | 0.009 | 0.95 | 0.0 | 0.05 | 11.14 | 0.00 | 1.944 | 12.48 | 0.23 | 5.7 | 94.3 | 0.0 | -2.78 | 0.31 | 0.77 | 1.09 | 3.7 | 0.003 | 0.65 | 0.0 | 0.04 | 14.25 | 0.00 | 1.958 | 9.11 | 1.44 | 4.4 | 95.6 | 0.0 | 0.01 | 2.17 | 0.32 | 0.82 | 1.56 | 11991 | 1481 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6WQ0 | 21867 | 2024-01-18 | 2020-04-28 | 2.8 | 2.89 | — | 2.9 | 0.007 | 0.71 | 0.0 | 0.04 | 15.92 | 0.01 | 2.210 | 4.29 | 0.00 | 1.6 | 98.4 | 0.0 | -0.40 | 0.60 | 0.90 | 4.25 | 2.9 | 0.003 | 0.58 | 0.0 | 0.03 | 16.55 | 0.00 | 2.267 | 4.74 | 1.59 | 0.5 | 99.5 | 0.0 | 3.29 | 1.55 | 0.58 | 0.89 | 3.77 | 57467 | 6026 | 48 | 602 | 0 | 0 | 0 | logfile |
✔ | 7KCH | 22808 | 2024-01-19 | 2020-10-05 | 4.33 | 4.50 | 4.30 | 4.3 | 0.011 | 1.07 | 0.0 | 0.06 | 16.55 | 0.01 | 2.175 | 19.21 | 4.72 | 10.5 | 89.5 | 0.0 | -4.19 | 0.49 | 0.52 | — | 4.3 | 0.002 | 0.69 | 0.0 | 0.04 | 14.04 | 0.00 | 1.956 | 10.89 | 0.00 | 5.7 | 94.3 | 0.0 | 0.09 | 1.54 | 0.58 | 0.83 | — | 12248 | 1805 | 7 | 0 | 6 | 0 | 0 | logfile |
✔ | 7AD9 | 11721 | 2024-01-20 | 2020-09-14 | 3.5 | 3.60 | 3.40 | 3.5 | 0.017 | 1.61 | 5.0 | 0.08 | 12.96 | 0.01 | 1.765 | 2.27 | 0.30 | 1.8 | 98.2 | 0.0 | -0.26 | 0.68 | 0.81 | 2.87 | 3.5 | 0.004 | 0.65 | 0.0 | 0.05 | 15.34 | 0.00 | 1.946 | 9.42 | 1.95 | 2.6 | 97.4 | 0.0 | 1.22 | 1.83 | 0.69 | 0.85 | 2.36 | 15560 | 1965 | 20 | 0 | 20 | 0 | 0 | logfile |
✔ | 6ZLV | 11275 | 2024-01-17 | 2020-07-01 | 3.5 | 3.60 | — | 3.5 | 0.011 | 1.86 | 4.0 | 0.12 | 12.22 | 0.01 | 2.221 | 19.37 | 2.72 | 3.7 | 95.7 | 0.6 | -1.53 | 0.54 | 0.79 | 1.09 | 3.5 | 0.004 | 0.75 | 0.0 | 0.05 | 15.10 | 0.00 | 2.151 | 13.75 | 2.55 | 2.6 | 97.4 | 0.0 | 0.23 | 1.52 | 0.54 | 0.78 | 1.93 | 5352 | 704 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6V7B | 21094 | 2024-01-18 | 2019-12-08 | 3.4 | 3.51 | — | 3.4 | 0.008 | 0.84 | 0.0 | 0.05 | 18.33 | 0.01 | 2.234 | 4.03 | 0.11 | 3.1 | 96.9 | 0.0 | -6.34 | 0.58 | 0.88 | 2.82 | 3.4 | 0.004 | 0.66 | 0.0 | 0.04 | 18.76 | 0.00 | 1.965 | 10.90 | 4.74 | 3.4 | 96.6 | 0.0 | 1.74 | 1.54 | 0.58 | 0.89 | 2.11 | 58277 | 5635 | 48 | 646 | 0 | 0 | 0 | logfile |
✔ | 8BVT | 16271 | 2024-01-17 | 2022-12-06 | 3.94 | 4.42 | 4.04 | 4.3 | 0.009 | 1.19 | 0.0 | 0.05 | 17.66 | 0.01 | 2.157 | 14.86 | 0.23 | 4.2 | 95.8 | 0.0 | 0.33 | 0.60 | 0.78 | 0.48 | 4.3 | 0.003 | 0.83 | 0.0 | 0.04 | 17.31 | 0.00 | 2.178 | 14.41 | 6.29 | 4.6 | 95.4 | 0.0 | 0.23 | 0.33 | 0.60 | 0.78 | 0.53 | 4517 | 623 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8D14 | 27115 | 2024-01-18 | 2022-05-26 | 2.51 | 2.45 | 2.49 | 2.6 | 0.004 | 0.57 | 0.0 | 0.05 | 13.46 | 0.00 | 2.064 | 5.73 | 0.32 | 1.1 | 98.9 | 0.0 | 1.45 | 0.66 | 0.87 | 4.65 | 2.5 | 0.005 | 0.64 | 0.0 | 0.05 | 16.01 | 0.00 | 1.834 | 3.95 | 1.49 | 1.4 | 98.6 | 0.0 | 1.14 | 0.35 | 0.65 | 0.89 | 5.15 | 9225 | 1113 | 9 | 0 | 9 | 426 | 0 | logfile |
✔ | 6WKX | 21812 | 2024-01-19 | 2020-04-17 | 4.2 | 4.31 | — | 4.2 | 0.006 | 0.59 | 0.0 | 0.04 | 15.11 | 0.00 | 2.298 | 2.52 | 0.00 | 0.0 | 100.0 | 0.0 | -3.67 | 0.77 | 0.90 | — | 4.2 | 0.003 | 0.62 | 0.0 | 0.04 | 16.66 | 0.00 | 2.199 | 7.21 | 0.00 | 0.0 | 100.0 | 0.0 | 4.60 | 0.98 | 0.77 | 0.88 | — | 12915 | 1575 | 105 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FSJ | 29419 | 2024-01-19 | 2023-01-10 | 3.65 | 3.93 | 3.70 | 3.9 | 0.004 | 0.69 | 0.0 | 0.05 | 16.99 | 0.00 | 1.974 | 7.82 | 0.00 | 6.3 | 93.7 | 0.0 | -1.15 | 0.70 | 0.74 | 1.70 | 3.9 | 0.003 | 0.67 | 0.0 | 0.04 | 14.27 | 0.00 | 2.119 | 9.44 | 2.96 | 6.1 | 93.9 | 0.0 | -1.09 | 0.99 | 0.71 | 0.75 | 1.55 | 9855 | 1257 | 16 | 0 | 28 | 0 | 0 | logfile |
✔ | 7QK6 | 14039 | 2024-01-17 | 2021-12-17 | 2.27 | 2.34 | 2.17 | 2.3 | 0.011 | 1.84 | 0.0 | 0.09 | 9.70 | 0.01 | 2.520 | 0.00 | 0.00 | 6.4 | 93.6 | 0.0 | -1.99 | 0.37 | 0.79 | 7.78 | 2.3 | 0.002 | 0.57 | 0.0 | 0.05 | 16.17 | 0.00 | 2.381 | 3.24 | 0.69 | 5.8 | 94.2 | 0.0 | -2.14 | 1.45 | 0.38 | 0.85 | 6.86 | 2469 | 162 | 3 | 0 | 0 | 0 | 1278 | logfile |
✔ | 6WKY | 21813 | 2024-01-18 | 2020-04-17 | 4.2 | 4.29 | — | 4.1 | 0.006 | 0.74 | 0.0 | 0.05 | 16.88 | 0.00 | 2.366 | 8.91 | 0.00 | 0.6 | 99.4 | 0.0 | -5.20 | 0.76 | 0.88 | — | 4.1 | 0.005 | 0.86 | 0.0 | 0.05 | 15.84 | 0.00 | 2.243 | 21.66 | 0.00 | 0.6 | 99.4 | 0.0 | -1.93 | 2.29 | 0.76 | 0.88 | — | 9140 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QKX | 14056 | 2024-01-17 | 2021-12-19 | 3.16 | 3.10 | 2.99 | 3.2 | 0.011 | 1.82 | 0.0 | 0.09 | 10.51 | 0.01 | 2.523 | 0.00 | 0.00 | 3.3 | 96.7 | 0.0 | -1.48 | 0.39 | 0.79 | 6.00 | 3.2 | 0.003 | 0.56 | 0.0 | 0.05 | 12.49 | 0.00 | 2.079 | 4.25 | 0.26 | 1.9 | 98.1 | 0.0 | -1.50 | 0.81 | 0.41 | 0.86 | 5.25 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 7ABK | 11698 | 2024-01-17 | 2020-09-07 | 3.6 | 4.10 | 3.49 | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 16.30 | 0.00 | 2.315 | 5.67 | 1.23 | 1.5 | 98.5 | 0.0 | 0.91 | 0.28 | 0.87 | 1.10 | 3.9 | 0.003 | 0.61 | 0.0 | 0.03 | 19.21 | 0.00 | 2.250 | 5.35 | 3.70 | 2.1 | 97.9 | 0.0 | 5.10 | 1.54 | 0.28 | 0.86 | 1.35 | 1574 | 196 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CGY | 30366 | 2024-01-18 | 2020-07-03 | 3.2 | 2.64 | — | 3.2 | 0.008 | 1.15 | 0.0 | 0.06 | 18.08 | 0.00 | 1.554 | 8.83 | 0.27 | 4.9 | 94.9 | 0.2 | -4.82 | 0.46 | 0.82 | 2.95 | 3.2 | 0.002 | 0.60 | 0.0 | 0.04 | 17.92 | 0.00 | 2.133 | 6.90 | 2.52 | 5.2 | 94.8 | 0.0 | -1.58 | 2.83 | 0.46 | 0.84 | 2.63 | 7212 | 915 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 6UUR | 20900 | 2024-01-17 | 2019-10-31 | 3.5 | 3.51 | — | 3.6 | 0.004 | 0.76 | 0.0 | 0.05 | 15.65 | 0.00 | 2.644 | 8.15 | 0.00 | 5.3 | 94.7 | 0.0 | -4.46 | 0.56 | 0.78 | 3.10 | 3.7 | 0.007 | 0.98 | 0.0 | 0.05 | 16.85 | 0.00 | 2.164 | 13.77 | 6.80 | 11.8 | 88.2 | 0.0 | -4.62 | 2.21 | 0.52 | 0.80 | 3.03 | 2770 | 400 | 10 | 0 | 0 | 0 | 0 | logfile |