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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7TPK | 26058 | 2024-01-17 | 2022-01-25 | 3.4 | 3.41 | — | 3.4 | 0.011 | 1.40 | 1.0 | 0.08 | 9.83 | 0.01 | 2.528 | 2.12 | 0.00 | 4.7 | 95.3 | 0.0 | -0.98 | 0.60 | 0.72 | 4.39 | 3.4 | 0.002 | 0.56 | 0.0 | 0.04 | 14.88 | 0.00 | 2.386 | 3.89 | 0.72 | 2.6 | 97.4 | 0.0 | -0.86 | 1.24 | 0.64 | 0.80 | 3.33 | 1484 | 194 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7MKG | 23890 | 2024-01-19 | 2021-04-23 | 3.07 | 3.13 | — | 4.0 | 0.023 | 1.98 | 0.0 | 0.10 | 10.38 | 0.01 | 2.409 | 0.44 | 0.00 | 5.6 | 94.4 | 0.0 | -1.46 | 0.47 | 0.65 | 2.63 | 4.1 | 0.005 | 0.70 | 0.0 | 0.05 | 13.49 | 0.00 | 2.147 | 20.86 | 2.81 | 7.6 | 92.4 | 0.0 | -2.77 | 1.99 | 0.47 | 0.71 | 2.69 | 11370 | 730 | 10 | 0 | 0 | 0 | 5800 | logfile |
✔ | 6W1N | 21513 | 2024-01-17 | 2020-03-04 | 4.0 | 4.43 | 4.16 | 4.1 | 0.002 | 0.55 | 0.0 | 0.04 | 12.17 | 0.00 | 2.226 | 6.50 | 0.41 | 1.4 | 98.6 | 0.0 | -0.42 | 0.72 | 0.75 | — | 4.1 | 0.003 | 0.76 | 0.0 | 0.04 | 14.18 | 0.00 | 2.112 | 12.42 | 2.20 | 3.1 | 96.9 | 0.0 | 0.78 | 0.75 | 0.74 | 0.80 | — | 105232 | 13984 | 12 | 0 | 1320 | 0 | 0 | logfile |
✔ | 6X6K | 22076 | 2024-01-18 | 2020-05-28 | 3.1 | 3.22 | — | 3.2 | 0.011 | 1.23 | 2.0 | 0.07 | 13.77 | 0.01 | 2.210 | 8.21 | 0.00 | 5.5 | 94.5 | 0.0 | -1.94 | 0.69 | 0.84 | 2.88 | 3.2 | 0.004 | 0.68 | 0.0 | 0.05 | 16.55 | 0.00 | 2.060 | 16.35 | 2.42 | 5.4 | 94.6 | 0.0 | -0.25 | 0.59 | 0.70 | 0.86 | 2.40 | 60970 | 7602 | 42 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Z1R | 11039 | 2024-01-19 | 2020-05-14 | 3.29 | 3.42 | 3.09 | 3.3 | 0.007 | 0.71 | 0.0 | 0.04 | 15.28 | 0.00 | 1.890 | 9.22 | 0.00 | 6.6 | 93.4 | 0.0 | -1.25 | 0.69 | 0.83 | 2.88 | 3.3 | 0.007 | 0.60 | 0.0 | 0.04 | 16.08 | 0.00 | 1.665 | 8.51 | 0.82 | 5.7 | 94.3 | 0.0 | -0.20 | 0.39 | 0.70 | 0.86 | 2.55 | 65754 | 4278 | 32 | 0 | 11 | 17 | 33137 | logfile |
✔ | 6YY0 | 11001 | 2024-01-18 | 2020-05-04 | 3.23 | 3.34 | 3.07 | 3.3 | 0.006 | 0.68 | 0.0 | 0.04 | 15.44 | 0.00 | 1.847 | 8.18 | 0.00 | 8.4 | 91.6 | 0.0 | -0.84 | 0.72 | 0.84 | 2.97 | 3.3 | 0.004 | 0.55 | 0.0 | 0.04 | 16.20 | 0.00 | 1.735 | 6.19 | 1.09 | 5.2 | 94.8 | 0.0 | 0.11 | 0.32 | 0.73 | 0.86 | 2.67 | 61162 | 3926 | 25 | 0 | 11 | 17 | 30826 | logfile |
✔ | 7YNS | 33970 | 2024-01-17 | 2022-07-31 | 3.0 | 2.79 | 2.25 | 3.1 | 0.009 | 0.66 | 0.0 | 0.06 | 11.51 | 0.00 | 2.233 | 10.18 | 0.00 | 5.1 | 94.9 | 0.0 | -3.28 | 0.51 | 0.87 | 6.08 | 3.1 | 0.006 | 0.63 | 0.0 | 0.05 | 14.07 | 0.00 | 2.219 | 6.72 | 2.71 | 4.8 | 95.2 | 0.0 | -2.09 | 0.90 | 0.49 | 0.88 | 4.99 | 2526 | 366 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EET | 28057 | 2024-01-17 | 2022-09-07 | 3.1 | 3.36 | 3.21 | 3.4 | 0.007 | 0.92 | 0.0 | 0.06 | 12.42 | 0.00 | 0.312 | 9.93 | 1.07 | 0.5 | 99.5 | 0.0 | 1.87 | 0.72 | 0.82 | 3.55 | 3.4 | 0.036 | 2.63 | 0.0 | 0.28 | 22.74 | 0.00 | 0.540 | 13.15 | 1.66 | 1.3 | 98.7 | 0.0 | 2.02 | 1.33 | 0.68 | 0.83 | 3.02 | 107640 | 13260 | 60 | 0 | 120 | 0 | 0 | logfile |
✔ | 7V4J | 31713 | 2024-01-18 | 2021-08-13 | 3.5 | 3.64 | — | 3.8 | 0.003 | 0.67 | 0.0 | 0.05 | 13.95 | 0.01 | 2.092 | 19.96 | 0.00 | 8.2 | 91.8 | 0.0 | -1.60 | 0.61 | 0.52 | 1.21 | 3.8 | 0.003 | 0.76 | 0.0 | 0.05 | 16.53 | 0.01 | 2.080 | 22.59 | 1.98 | 6.7 | 93.3 | 0.0 | -1.65 | 0.52 | 0.63 | 0.58 | 1.23 | 9850 | 1275 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X64 | 22069 | 2024-01-20 | 2020-05-27 | 3.7 | 4.01 | — | 3.7 | 0.008 | 1.34 | 0.0 | 0.05 | 9.32 | 0.01 | 2.584 | 0.78 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.68 | 0.84 | — | 3.7 | 0.009 | 1.23 | 0.0 | 0.05 | 5.42 | 0.00 | 2.111 | 10.35 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.35 | 0.69 | 0.86 | — | 15840 | 0 | 36 | 0 | 3168 | 0 | 0 | logfile |
✔ | 6ZG7 | 11195 | 2024-01-20 | 2020-06-18 | 3.49 | 3.18 | 3.39 | 3.4 | 0.006 | 0.66 | 0.0 | 0.04 | 14.31 | 0.00 | 2.002 | 10.29 | 0.00 | 4.7 | 95.3 | 0.0 | -0.05 | 0.54 | 0.78 | 2.53 | 3.4 | 0.005 | 0.55 | 0.0 | 0.04 | 15.82 | 0.00 | 1.963 | 9.34 | 2.86 | 3.5 | 96.5 | 0.0 | 0.89 | 0.44 | 0.55 | 0.80 | 2.16 | 15587 | 1048 | 11 | 0 | 0 | 0 | 7852 | logfile |
✔ | 6Yo0 | 10862 | 2024-01-18 | 2020-04-14 | 2.9 | 3.37 | 2.94 | 3.1 | 0.009 | 0.75 | 0.0 | 0.04 | 9.97 | 0.00 | 1.889 | 11.21 | 0.27 | 3.7 | 96.3 | 0.0 | -0.60 | 0.84 | 0.87 | 3.83 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 13.49 | 0.00 | 1.744 | 8.17 | 0.60 | 4.4 | 95.6 | 0.0 | 1.14 | 0.79 | 0.84 | 0.89 | 3.25 | 55780 | 3598 | 17 | 0 | 10 | 0 | 28102 | logfile |
✔ | 6ZG8 | 11196 | 2024-01-20 | 2020-06-18 | 3.49 | 2.83 | 3.28 | 3.2 | 0.006 | 0.69 | 0.0 | 0.04 | 14.97 | 0.00 | 2.041 | 12.31 | 0.00 | 3.9 | 96.1 | 0.0 | 0.37 | 0.52 | 0.76 | 2.19 | 3.2 | 0.003 | 0.52 | 0.0 | 0.04 | 16.31 | 0.00 | 2.081 | 9.89 | 1.17 | 2.5 | 97.5 | 0.0 | 2.16 | 1.12 | 0.52 | 0.77 | 1.80 | 15522 | 1045 | 11 | 0 | 0 | 0 | 7815 | logfile |
✔ | 6WC9 | 21603 | 2024-01-19 | 2020-03-30 | 2.64 | 2.43 | — | 2.6 | 0.006 | 0.54 | 0.0 | 0.04 | 15.75 | 0.00 | 1.949 | 3.96 | 2.10 | 3.9 | 96.1 | 0.0 | -0.42 | 0.53 | 0.77 | 3.24 | 2.6 | 0.003 | 0.52 | 0.0 | 0.04 | 17.26 | 0.00 | 1.945 | 3.79 | 2.43 | 1.7 | 98.3 | 0.0 | 3.05 | 0.75 | 0.64 | 0.82 | 3.41 | 11713 | 734 | 6 | 0 | 7 | 106 | 5904 | logfile |
✔ | 6S91 | 10126 | 2024-01-19 | 2019-07-11 | 2.68 | 3.17 | 2.85 | 3.0 | 0.006 | 0.80 | 0.0 | 0.05 | 15.39 | 0.00 | 1.696 | 20.08 | 0.09 | 13.5 | 86.3 | 0.2 | -4.91 | 0.69 | 0.74 | 2.17 | 3.1 | 0.005 | 0.82 | 0.0 | 0.05 | 17.49 | 0.00 | 1.998 | 18.73 | 4.04 | 11.6 | 88.4 | 0.0 | -2.95 | 0.65 | 0.66 | 0.81 | 1.90 | 62045 | 7488 | 36 | 84 | 6 | 0 | 0 | logfile |
✔ | 6HJN | 0234 | 2024-01-19 | 2018-09-04 | 3.3 | 3.88 | 3.28 | 3.6 | 0.008 | 1.23 | 3.0 | 0.11 | 15.28 | 0.02 | 1.734 | 5.04 | 2.80 | 8.9 | 91.1 | 0.0 | -3.22 | 0.91 | 0.91 | 4.09 | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 13.67 | 0.00 | 2.114 | 5.95 | 1.48 | 8.1 | 91.9 | 0.0 | -0.17 | 0.56 | 0.89 | 0.89 | 3.12 | 12309 | 1488 | 24 | 0 | 48 | 0 | 0 | logfile |
✔ | 7TLZ | 25991 | 2024-01-17 | 2022-01-19 | 3.3 | 3.47 | 3.24 | 3.4 | 0.011 | 1.30 | 0.0 | 0.08 | 9.09 | 0.01 | 2.581 | 0.87 | 0.31 | 2.8 | 97.2 | 0.0 | 1.02 | 0.68 | 0.81 | 5.51 | 3.4 | 0.006 | 0.70 | 0.0 | 0.05 | 12.25 | 0.00 | 2.297 | 4.51 | 0.94 | 4.6 | 95.4 | 0.0 | 0.55 | 1.00 | 0.68 | 0.87 | 5.92 | 3621 | 475 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 7URT | 26718 | 2024-01-17 | 2022-04-22 | 2.39 | 2.51 | 2.52 | 2.5 | 0.008 | 0.96 | 0.0 | 0.07 | 13.99 | 0.01 | 0.512 | 6.62 | 1.60 | 0.9 | 99.1 | 0.0 | 1.22 | 0.71 | 0.82 | 4.21 | 2.5 | 0.037 | 3.41 | 17.0 | 0.29 | 25.51 | 0.01 | 0.387 | 10.75 | 2.97 | 1.5 | 98.5 | 0.0 | 1.74 | 1.11 | 0.69 | 0.81 | 2.97 | 107880 | 13260 | 60 | 0 | 120 | 0 | 0 | logfile |
✔ | 7YKD | 33891 | 2024-01-18 | 2022-07-22 | 2.81 | 3.29 | 2.94 | 3.2 | 0.009 | 0.86 | 0.0 | 0.06 | 14.19 | 0.00 | 2.118 | 15.46 | 0.10 | 5.0 | 95.0 | 0.0 | -0.18 | 0.70 | 0.83 | 4.27 | 3.2 | 0.003 | 0.64 | 0.0 | 0.04 | 15.02 | 0.00 | 2.181 | 9.55 | 2.29 | 3.7 | 96.3 | 0.0 | 0.75 | 0.92 | 0.67 | 0.84 | 3.24 | 8965 | 1133 | 7 | 0 | 5 | 0 | 0 | logfile |
✔ | 8DZJ | 27801 | 2024-01-18 | 2022-08-07 | 2.9 | 3.60 | 2.84 | 3.0 | 0.004 | 0.60 | 0.0 | 0.04 | 20.83 | 0.00 | 2.209 | 12.65 | 0.38 | 1.5 | 98.5 | 0.0 | 0.94 | 0.77 | 0.71 | 3.07 | 3.0 | 0.004 | 0.64 | 0.0 | 0.04 | 21.08 | 0.00 | 2.080 | 14.70 | 1.69 | 2.1 | 97.9 | 0.0 | 1.24 | 0.57 | 0.85 | 0.81 | 2.87 | 9030 | 613 | 6 | 190 | 1 | 0 | 0 | logfile |