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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7DCR | 30640 | 2024-01-17 | 2020-10-26 | 3.15 | 3.27 | — | 3.2 | 0.005 | 0.89 | 1.0 | 0.06 | 10.49 | 0.01 | 2.260 | 4.10 | 0.63 | 3.0 | 96.7 | 0.3 | -4.71 | 0.66 | 0.78 | 3.15 | 3.2 | 0.002 | 0.60 | 0.0 | 0.04 | 14.04 | 0.00 | 2.153 | 7.15 | 1.73 | 3.4 | 96.6 | 0.0 | 0.61 | 0.68 | 0.67 | 0.81 | 2.40 | 5653 | 711 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HFC | 34717 | 2024-01-17 | 2022-11-10 | 3.5 | 3.66 | 3.42 | 3.7 | 0.007 | 0.67 | 0.0 | 0.05 | 18.01 | 0.00 | 2.164 | 9.17 | 3.88 | 6.5 | 93.3 | 0.2 | -2.90 | 0.68 | 0.82 | 2.21 | 3.7 | 0.002 | 0.59 | 0.0 | 0.04 | 18.02 | 0.00 | 2.189 | 5.52 | 2.97 | 4.0 | 96.0 | 0.0 | 0.17 | 1.19 | 0.64 | 0.80 | 2.11 | 4007 | 498 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 6PXW | 20523 | 2024-01-19 | 2019-07-28 | 3.1 | 3.31 | — | 3.3 | 0.008 | 0.99 | 0.0 | 0.06 | 9.83 | 0.01 | 2.254 | 4.99 | 0.16 | 9.9 | 89.6 | 0.5 | -4.04 | 0.76 | 0.82 | 4.11 | 3.3 | 0.002 | 0.55 | 0.0 | 0.04 | 13.58 | 0.00 | 2.304 | 5.13 | 0.55 | 7.0 | 93.0 | 0.0 | -1.95 | 0.78 | 0.75 | 0.82 | 3.40 | 11198 | 1386 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RSi | 24672 | 2024-01-19 | 2021-08-11 | 4.9 | 7.04 | 5.29 | 7.8 | 0.015 | 1.51 | 0.0 | 0.07 | 12.44 | 0.01 | 2.015 | 5.90 | 0.00 | 4.5 | 94.6 | 0.9 | -0.32 | 0.82 | 0.69 | — | 7.7 | 0.002 | 0.55 | 0.0 | 0.04 | 12.95 | 0.00 | 1.911 | 11.79 | 0.00 | 4.7 | 95.3 | 0.0 | 0.22 | 1.22 | 0.78 | 0.52 | — | 10886 | 686 | 2 | 0 | 2 | 0 | 5400 | logfile |
✔ | 7N59 | 24183 | 2024-01-18 | 2021-06-05 | 3.6 | 4.16 | 3.74 | 4.1 | 0.003 | 0.56 | 0.0 | 0.04 | 13.84 | 0.00 | 2.221 | 7.04 | 0.10 | 2.1 | 97.9 | 0.0 | 1.69 | 0.69 | 0.81 | 1.10 | 4.1 | 0.002 | 0.51 | 0.0 | 0.04 | 15.94 | 0.00 | 2.198 | 6.29 | 1.51 | 2.1 | 97.9 | 0.0 | 2.31 | 0.34 | 0.69 | 0.81 | 0.63 | 9238 | 1180 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7TYM | 26185 | 2024-01-19 | 2022-02-13 | 3.4 | 3.43 | — | 3.5 | 0.002 | 0.54 | 0.0 | 0.04 | 15.94 | 0.00 | 2.175 | 8.12 | 0.00 | 7.1 | 92.8 | 0.1 | -1.35 | 0.73 | 0.81 | 2.62 | 3.5 | 0.002 | 0.54 | 0.0 | 0.04 | 16.43 | 0.00 | 2.169 | 7.28 | 2.67 | 7.4 | 92.6 | 0.0 | -1.55 | 1.11 | 0.72 | 0.81 | 3.08 | 12112 | 1542 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TCH | 25812 | 2024-01-18 | 2021-12-23 | 3.7 | 3.94 | 3.73 | 3.9 | 0.005 | 1.16 | 0.0 | 0.04 | 16.68 | 0.00 | 2.246 | 5.68 | 0.00 | 8.0 | 92.0 | 0.0 | 0.08 | 0.71 | 0.84 | 1.54 | 3.9 | 0.002 | 0.65 | 0.0 | 0.04 | 17.11 | 0.00 | 2.226 | 5.79 | 1.53 | 6.9 | 93.1 | 0.0 | 0.26 | 0.37 | 0.69 | 0.83 | 1.11 | 9043 | 1135 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 7XTZ | 33453 | 2024-01-17 | 2022-05-18 | 2.8 | 2.99 | 2.73 | 2.9 | 0.012 | 0.90 | 0.0 | 0.05 | 13.65 | 0.00 | 2.204 | 0.77 | 0.42 | 3.2 | 96.8 | 0.0 | -0.29 | 0.83 | 0.84 | 4.09 | 2.9 | 0.002 | 0.48 | 0.0 | 0.04 | 13.39 | 0.00 | 2.056 | 3.15 | 0.56 | 2.9 | 97.1 | 0.0 | -0.05 | 0.30 | 0.83 | 0.86 | 3.77 | 51900 | 3291 | 21 | 0 | 75 | 0 | 25032 | logfile |
✔ | 8G46 | 29714 | 2024-01-18 | 2023-02-08 | 2.2 | 2.34 | 2.28 | 2.4 | 0.009 | 0.98 | 0.0 | 0.06 | 15.97 | 0.01 | 2.207 | 6.43 | 1.70 | 3.0 | 97.0 | 0.0 | -0.25 | 0.54 | 0.79 | 4.41 | 2.4 | 0.002 | 0.62 | 0.0 | 0.04 | 16.34 | 0.00 | 2.226 | 5.02 | 0.96 | 2.4 | 97.6 | 0.0 | 0.24 | 0.22 | 0.62 | 0.83 | 4.27 | 8603 | 1064 | 7 | 0 | 2 | 110 | 0 | logfile |
✔ | 6RiU | 4898 | 2024-01-17 | 2019-04-25 | 3.9 | 6.21 | 2.04 | 7.0 | 0.008 | 1.19 | 0.0 | 0.09 | 15.19 | 0.01 | 2.182 | 5.20 | 0.00 | 8.4 | 91.6 | 0.0 | -5.77 | 0.59 | 0.69 | 0.56 | 7.1 | 0.002 | 0.66 | 0.0 | 0.03 | 16.40 | 0.00 | 2.040 | 12.47 | 1.32 | 3.9 | 96.1 | 0.0 | -0.28 | 1.43 | 0.61 | 0.75 | 0.76 | 2882 | 182 | 2 | 0 | 0 | 0 | 1430 | logfile |
✔ | 7UZU | 26918 | 2024-01-18 | 2022-05-09 | 2.3 | 2.23 | 2.31 | 2.2 | 0.003 | 0.57 | 0.0 | 0.04 | 17.47 | 0.01 | 2.124 | 3.14 | 0.52 | 3.1 | 96.9 | 0.0 | 1.73 | 0.60 | 0.87 | 5.53 | 2.2 | 0.002 | 0.47 | 0.0 | 0.03 | 17.50 | 0.00 | 2.119 | 3.96 | 1.29 | 3.3 | 96.7 | 0.0 | 2.77 | 0.16 | 0.59 | 0.87 | 5.53 | 7399 | 483 | 4 | 0 | 0 | 79 | 3655 | logfile |
✔ | 6X3F | 22021 | 2024-01-18 | 2020-05-21 | 3.03 | 3.23 | — | 3.3 | 0.006 | 0.93 | 0.0 | 0.06 | 14.72 | 0.01 | 2.351 | 3.78 | 0.00 | 5.0 | 95.0 | 0.0 | -6.78 | 0.58 | 0.85 | 3.24 | 3.3 | 0.002 | 0.60 | 0.0 | 0.04 | 15.63 | 0.00 | 2.286 | 6.26 | 0.87 | 3.5 | 96.5 | 0.0 | -0.22 | 0.95 | 0.54 | 0.85 | 2.02 | 9366 | 1227 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 7S8M | 24897 | 2024-01-18 | 2021-09-18 | 2.54 | 2.13 | 2.54 | 2.0 | 0.004 | 0.59 | 0.0 | 0.04 | 12.64 | 0.00 | 2.171 | 6.57 | 0.00 | 4.1 | 95.9 | 0.0 | 0.46 | 0.79 | 0.80 | 4.13 | 2.0 | 0.002 | 0.52 | 0.0 | 0.04 | 14.84 | 0.00 | 2.223 | 6.51 | 2.29 | 3.5 | 96.5 | 0.0 | 1.36 | 0.31 | 0.81 | 0.82 | 3.72 | 8346 | 1102 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N7P | 24230 | 2024-01-17 | 2021-06-10 | 3.24 | 2.66 | — | 3.2 | 0.058 | 2.03 | 0.0 | 0.04 | 19.97 | 0.00 | 1.647 | 12.45 | 0.35 | 1.6 | 98.4 | 0.0 | 1.62 | 0.58 | 0.84 | 2.19 | 3.2 | 0.002 | 0.55 | 0.0 | 0.03 | 18.03 | 0.00 | 2.244 | 14.32 | 1.39 | 2.3 | 97.7 | 0.0 | 3.81 | 0.36 | 0.58 | 0.86 | 1.60 | 5400 | 626 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7A8Z | 11680 | 2024-01-18 | 2020-08-31 | 3.35 | 3.81 | 3.38 | 3.7 | 0.004 | 0.59 | 0.0 | 0.04 | 14.41 | 0.00 | 2.254 | 7.18 | 0.00 | 7.6 | 92.3 | 0.1 | -1.49 | 0.68 | 0.75 | 3.00 | 3.8 | 0.002 | 0.54 | 0.0 | 0.04 | 15.74 | 0.00 | 2.281 | 6.39 | 1.65 | 6.2 | 93.7 | 0.1 | -0.51 | 1.50 | 0.72 | 0.79 | 2.74 | 8402 | 1103 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TYF | 26178 | 2024-01-19 | 2022-02-13 | 2.2 | 2.16 | 2.14 | 2.2 | 0.011 | 0.57 | 0.0 | 0.04 | 14.57 | 0.00 | 2.234 | 4.87 | 0.87 | 1.8 | 98.2 | 0.0 | -1.73 | 0.64 | 0.82 | 5.12 | 2.2 | 0.002 | 0.58 | 0.0 | 0.04 | 15.84 | 0.00 | 2.220 | 5.91 | 1.36 | 2.1 | 97.9 | 0.0 | 1.07 | 0.46 | 0.67 | 0.86 | 4.34 | 10331 | 1266 | 12 | 0 | 16 | 83 | 0 | logfile |
✔ | 7LCJ | 23275 | 2024-01-17 | 2021-01-11 | 2.82 | 3.02 | 2.78 | 3.1 | 0.011 | 1.19 | 3.0 | 0.08 | 13.41 | 0.01 | 2.216 | 8.89 | 1.16 | 3.9 | 96.1 | 0.0 | 0.54 | 0.46 | 0.80 | 2.75 | 3.1 | 0.002 | 0.49 | 0.0 | 0.03 | 15.46 | 0.00 | 2.249 | 4.52 | 1.74 | 2.1 | 97.9 | 0.0 | 1.45 | 1.69 | 0.48 | 0.82 | 2.84 | 3264 | 390 | 1 | 0 | 1 | 17 | 0 | logfile |
✔ | 7M71 | 23707 | 2024-01-17 | 2021-03-26 | 2.66 | 3.67 | 2.73 | 3.0 | 0.013 | 1.86 | 5.0 | 0.11 | 12.98 | 0.02 | 2.531 | 0.08 | 0.41 | 5.0 | 95.0 | 0.0 | -0.93 | 0.52 | 0.79 | 3.87 | 3.0 | 0.002 | 0.62 | 0.0 | 0.04 | 13.65 | 0.00 | 2.177 | 6.89 | 0.68 | 3.1 | 96.9 | 0.0 | -0.17 | 1.34 | 0.59 | 0.90 | 3.75 | 6646 | 852 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 6VJA | 21212 | 2024-01-18 | 2020-01-15 | 3.3 | 3.74 | 3.48 | 3.6 | 0.014 | 1.27 | 0.0 | 0.08 | 12.61 | 0.01 | 2.193 | 4.71 | 0.49 | 4.2 | 95.7 | 0.1 | 0.64 | 0.61 | 0.80 | 2.94 | 3.7 | 0.002 | 0.64 | 0.0 | 0.04 | 14.63 | 0.00 | 2.216 | 5.30 | 2.44 | 2.3 | 97.7 | 0.0 | 1.59 | 1.24 | 0.60 | 0.79 | 2.23 | 9342 | 1204 | 8 | 0 | 6 | 0 | 0 | logfile |
✔ | 6S6T | 10105 | 2024-01-18 | 2019-07-03 | 4.1 | 4.22 | 4.17 | 4.1 | 0.024 | 0.98 | 0.0 | 0.08 | 13.05 | 0.00 | 1.163 | 8.26 | 0.02 | 5.6 | 94.4 | 0.0 | -3.19 | 0.74 | 0.83 | — | 4.1 | 0.002 | 0.79 | 0.0 | 0.05 | 13.33 | 0.00 | 1.786 | 8.41 | 0.05 | 3.7 | 96.3 | 0.0 | -1.04 | 0.56 | 0.73 | 0.83 | — | 56543 | 7304 | 14 | 0 | 17 | 0 | 0 | logfile |