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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6X0U | 21984 | 2024-01-17 | 2020-05-17 | 3.6 | 3.62 | — | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 14.50 | 0.00 | 2.277 | 5.74 | 0.00 | 3.7 | 96.1 | 0.3 | -5.79 | 0.26 | 0.78 | 1.89 | 3.6 | 0.002 | 0.66 | 0.0 | 0.03 | 17.85 | 0.00 | 2.198 | 6.54 | 2.34 | 3.2 | 96.8 | 0.0 | 1.40 | 0.77 | 0.27 | 0.78 | 2.51 | 3091 | 398 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E33 | 30975 | 2024-01-18 | 2021-02-07 | 2.9 | 3.20 | — | 3.2 | 0.004 | 0.45 | 0.0 | 0.04 | 12.84 | 0.00 | 1.918 | 6.58 | 0.00 | 1.2 | 98.8 | 0.0 | 2.41 | 0.63 | 0.74 | 2.39 | 3.2 | 0.003 | 0.59 | 0.0 | 0.04 | 16.25 | 0.00 | 2.119 | 10.22 | 1.93 | 2.3 | 97.7 | 0.0 | 1.21 | 1.56 | 0.62 | 0.78 | 2.59 | 8538 | 1086 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7CMU | 30410 | 2024-01-18 | 2020-07-29 | 3.0 | 3.27 | — | 3.3 | 0.005 | 0.49 | 0.0 | 0.04 | 12.34 | 0.00 | 1.996 | 4.13 | 0.00 | 1.7 | 98.3 | 0.0 | 2.96 | 0.61 | 0.74 | 2.42 | 3.3 | 0.006 | 0.72 | 0.0 | 0.05 | 16.15 | 0.00 | 2.044 | 9.57 | 3.74 | 3.5 | 96.5 | 0.0 | 1.15 | 1.19 | 0.65 | 0.81 | 2.67 | 8771 | 1123 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7W7U | 32348 | 2024-01-18 | 2021-12-06 | 3.0 | 2.54 | 2.92 | 2.9 | 0.003 | 0.56 | 0.0 | 0.04 | 12.54 | 0.00 | 1.966 | 7.56 | 0.00 | 2.6 | 97.4 | 0.0 | 0.77 | 0.59 | 0.77 | 1.85 | 3.0 | 0.002 | 0.50 | 0.0 | 0.04 | 16.16 | 0.00 | 2.070 | 7.94 | 1.39 | 2.8 | 97.2 | 0.0 | 0.60 | 1.30 | 0.59 | 0.79 | 1.47 | 7833 | 1015 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6E0F | 8946 | 2024-01-20 | 2018-07-06 | 3.7 | 3.77 | — | 3.9 | 0.010 | 1.01 | 0.0 | 0.07 | 9.64 | 0.01 | 1.999 | 13.22 | 0.00 | 8.1 | 91.3 | 0.6 | -4.79 | 0.71 | 0.79 | 3.23 | 3.8 | 0.003 | 0.79 | 0.0 | 0.05 | 16.07 | 0.00 | 2.202 | 16.83 | 1.85 | 8.9 | 91.1 | 0.0 | -1.43 | 1.29 | 0.72 | 0.79 | 2.27 | 13650 | 1740 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CX4 | 30491 | 2024-01-18 | 2020-09-01 | 2.9 | 3.15 | — | 3.1 | 0.004 | 0.64 | 0.0 | 0.05 | 12.92 | 0.00 | 2.032 | 8.05 | 0.00 | 3.5 | 96.5 | 0.0 | -1.78 | 0.66 | 0.80 | 3.58 | 3.1 | 0.003 | 0.59 | 0.0 | 0.04 | 15.91 | 0.00 | 2.143 | 6.77 | 2.27 | 2.9 | 97.1 | 0.0 | 0.36 | 0.48 | 0.66 | 0.82 | 2.56 | 7926 | 1020 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7QL1 | 14060 | 2024-01-17 | 2021-12-19 | 3.34 | 3.41 | 3.13 | 3.4 | 0.011 | 2.01 | 0.0 | 0.10 | 11.06 | 0.01 | 2.654 | 0.29 | 0.00 | 7.5 | 92.5 | 0.0 | -3.09 | 0.42 | 0.83 | 4.57 | 3.4 | 0.004 | 0.74 | 0.0 | 0.05 | 15.06 | 0.00 | 2.262 | 8.51 | 3.12 | 3.3 | 96.7 | 0.0 | -2.38 | 1.66 | 0.38 | 0.81 | 4.29 | 1671 | 219 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7D76 | 30602 | 2024-01-18 | 2020-10-03 | 3.1 | 3.39 | — | 3.4 | 0.008 | 0.79 | 0.0 | 0.05 | 14.40 | 0.01 | 2.167 | 8.33 | 0.00 | 4.7 | 95.3 | 0.0 | -2.55 | 0.65 | 0.81 | 3.21 | 3.3 | 0.003 | 0.56 | 0.0 | 0.04 | 14.76 | 0.00 | 2.191 | 7.54 | 2.18 | 2.9 | 97.1 | 0.0 | 0.60 | 1.49 | 0.63 | 0.80 | 2.67 | 7015 | 874 | 6 | 0 | 7 | 0 | 0 | logfile |
✔ | 7LJD | 23391 | 2024-01-18 | 2021-01-28 | 3.2 | 3.31 | — | 3.3 | 0.004 | 0.85 | 0.0 | 0.06 | 8.67 | 0.01 | 2.294 | 3.69 | 0.00 | 2.2 | 97.8 | 0.0 | -2.10 | 0.57 | 0.72 | 2.46 | 3.3 | 0.003 | 0.58 | 0.0 | 0.04 | 13.47 | 0.00 | 2.162 | 6.45 | 2.77 | 2.9 | 97.1 | 0.0 | 0.43 | 0.73 | 0.63 | 0.79 | 2.05 | 8518 | 1046 | 6 | 0 | 11 | 0 | 0 | logfile |
✔ | 7F9Z | 31501 | 2024-01-19 | 2021-07-05 | 3.2 | 2.27 | — | 2.1 | 0.010 | 0.56 | 3.0 | 0.04 | 13.18 | 0.00 | 1.866 | 7.66 | 0.00 | 1.9 | 98.1 | 0.0 | 1.51 | 0.69 | 0.68 | 1.75 | 2.1 | 0.005 | 1.12 | 2.0 | 0.05 | 15.81 | 0.01 | 1.899 | 15.32 | 2.21 | 3.5 | 96.5 | 0.0 | 0.28 | 1.55 | 0.74 | 0.75 | 2.30 | 9982 | 1264 | 7 | 0 | 7 | 0 | 0 | logfile |
✔ | 6UES | 20755 | 2024-01-17 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 25.90 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.76 | — | 3.3 | 0.007 | 0.89 | 0.0 | 0.04 | 27.41 | 0.01 | 1.783 | 37.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.88 | 0.83 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |
✔ | 6SUF | 10313 | 2024-01-17 | 2019-09-13 | 3.4 | 3.32 | — | 3.3 | 0.021 | 1.77 | 6.0 | 0.10 | 10.78 | 0.01 | 2.186 | 1.73 | 0.00 | 2.4 | 97.3 | 0.3 | -0.46 | 0.80 | 0.80 | 2.93 | 3.3 | 0.004 | 0.68 | 3.0 | 0.04 | 15.08 | 0.00 | 1.474 | 12.35 | 1.41 | 3.7 | 96.2 | 0.0 | 0.45 | 1.32 | 0.82 | 0.84 | 2.59 | 108112 | 13607 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UET | 20756 | 2024-01-17 | 2019-09-23 | 4.1 | 4.91 | — | 5.1 | 0.010 | 1.61 | 0.0 | 0.07 | 25.64 | 0.02 | 1.977 | 4.88 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.62 | 0.73 | — | 5.0 | 0.007 | 0.96 | 0.0 | 0.05 | 27.65 | 0.01 | 1.738 | 53.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.75 | 0.66 | 0.81 | — | 3869 | 0 | 1 | 119 | 1 | 0 | 1291 | logfile |
✔ | 7NL0 | 12453 | 2024-01-19 | 2021-02-19 | 3.5 | 3.08 | — | 3.0 | 0.006 | 0.71 | 0.0 | 0.04 | 29.74 | 0.00 | 2.147 | 12.17 | 0.00 | 4.1 | 95.9 | 0.0 | 0.67 | 0.78 | 0.81 | 3.10 | 3.1 | 0.004 | 0.59 | 0.0 | 0.03 | 29.63 | 0.00 | 2.212 | 11.00 | 2.07 | 3.0 | 97.0 | 0.0 | 2.45 | 0.27 | 0.77 | 0.81 | 2.84 | 11363 | 755 | 10 | 262 | 0 | 0 | 0 | logfile |
✔ | 7BV2 | 30210 | 2024-01-18 | 2020-04-09 | 2.5 | 2.82 | — | 2.8 | 0.005 | 0.74 | 0.0 | 0.05 | 14.89 | 0.00 | 1.942 | 5.42 | 0.00 | 1.3 | 98.7 | 0.0 | 0.03 | 0.77 | 0.83 | 4.56 | 2.8 | 0.003 | 0.50 | 0.0 | 0.04 | 16.02 | 0.00 | 2.164 | 5.36 | 1.47 | 1.6 | 98.4 | 0.0 | 0.63 | 0.45 | 0.70 | 0.83 | 4.06 | 8630 | 1011 | 8 | 25 | 6 | 5 | 0 | logfile |
✔ | 6SEG | 10155 | 2024-01-19 | 2019-07-30 | 3.1 | 3.19 | — | 3.2 | 0.006 | 0.86 | 0.0 | 0.05 | 27.75 | 0.01 | 2.283 | 3.10 | 0.00 | 1.3 | 98.7 | 0.0 | -3.47 | 0.66 | 0.79 | 3.38 | 3.2 | 0.005 | 0.94 | 1.0 | 0.05 | 28.50 | 0.01 | 1.805 | 6.91 | 1.84 | 1.4 | 98.6 | 0.0 | 1.43 | 0.34 | 0.66 | 0.81 | 2.38 | 11689 | 728 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 8iD6 | 35358 | 2024-01-18 | 2023-02-12 | 2.8 | 2.99 | 2.85 | 3.0 | 0.004 | 0.67 | 0.0 | 0.05 | 11.40 | 0.01 | 2.180 | 7.91 | 0.00 | 0.7 | 99.3 | 0.0 | 0.86 | 0.68 | 0.81 | 3.66 | 3.0 | 0.005 | 0.65 | 0.0 | 0.04 | 14.27 | 0.00 | 2.088 | 5.02 | 2.07 | 2.5 | 97.5 | 0.0 | 0.98 | 0.50 | 0.67 | 0.83 | 3.68 | 8727 | 1139 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8D97 | 27257 | 2024-01-20 | 2022-06-09 | 3.8 | 3.96 | 3.72 | 3.8 | 0.004 | 0.64 | 0.0 | 0.04 | 17.04 | 0.00 | 2.113 | 8.76 | 0.00 | 5.1 | 94.9 | 0.0 | -2.43 | 0.87 | 0.87 | 2.06 | 3.8 | 0.003 | 0.52 | 0.0 | 0.04 | 17.69 | 0.00 | 2.207 | 7.65 | 1.27 | 3.8 | 96.2 | 0.0 | -0.13 | 0.41 | 0.87 | 0.86 | 2.04 | 13874 | 1600 | 3 | 42 | 4 | 0 | 0 | logfile |
✔ | 7W9F | 32366 | 2024-01-17 | 2021-12-09 | 3.6 | 2.59 | — | 2.2 | 0.003 | 0.73 | 0.0 | 0.05 | 13.99 | 0.01 | 2.302 | 3.37 | 0.00 | 3.7 | 96.3 | 0.0 | -3.66 | 0.73 | 0.72 | 1.95 | 3.2 | 0.003 | 0.62 | 0.0 | 0.04 | 16.03 | 0.00 | 2.228 | 10.74 | 3.30 | 4.5 | 95.5 | 0.0 | -1.02 | 0.51 | 0.74 | 0.73 | 2.18 | 4856 | 625 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PBW | 13307 | 2024-01-18 | 2021-08-02 | 2.1 | 1.98 | — | 2.1 | 0.009 | 0.99 | 0.0 | 0.05 | 12.27 | 0.01 | 2.243 | 2.93 | 0.00 | 0.0 | 100.0 | 0.0 | 3.14 | 0.78 | 0.90 | 7.90 | 2.1 | 0.004 | 0.76 | 0.0 | 0.04 | 14.40 | 0.01 | 2.149 | 7.89 | 0.46 | 0.0 | 100.0 | 0.0 | 4.47 | 0.28 | 0.77 | 0.90 | 7.39 | 9500 | 873 | 54 | 0 | 81 | 230 | 0 | logfile |