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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8B8G | 15913 | 2023-10-06 | 2022-10-04 | 3.39 | 3.99 | 3.34 | 3.8 | 0.004 | 0.56 | 0.0 | 0.04 | 13.75 | 0.01 | 2.096 | 11.04 | 7.59 | 4.2 | 95.8 | 0.0 | 0.87 | 0.66 | 0.82 | 2.32 | 3.8 | 0.003 | 0.58 | 0.0 | 0.04 | 15.10 | 0.01 | 2.158 | 11.08 | 0.38 | 3.8 | 96.2 | 0.0 | 1.30 | 1.89 | 0.64 | 0.81 | 2.16 | 12086 | 1464 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V9L | 31824 | 2023-10-03 | 2021-08-26 | 2.6 | 2.13 | — | 1.8 | 0.004 | 0.69 | 0.0 | 0.05 | 13.08 | 0.01 | 2.120 | 3.88 | 0.00 | 3.8 | 96.2 | 0.0 | 0.00 | 0.67 | 0.70 | 3.73 | 1.8 | 0.004 | 0.61 | 0.0 | 0.04 | 15.75 | 0.00 | 2.140 | 11.25 | 1.84 | 2.3 | 97.7 | 0.0 | 0.73 | 0.50 | 0.77 | 0.79 | 3.06 | 8047 | 1019 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KAK | 22773 | 2023-10-05 | 2020-10-01 | 3.9 | 4.59 | 4.06 | 4.2 | 0.003 | 0.54 | 0.0 | 0.04 | 11.57 | 0.00 | 2.246 | 6.34 | 0.00 | 2.9 | 97.1 | 0.0 | -1.34 | 0.66 | 0.83 | 1.49 | 4.2 | 0.005 | 0.74 | 0.0 | 0.04 | 14.15 | 0.00 | 2.194 | 13.07 | 0.57 | 3.6 | 96.4 | 0.0 | 1.59 | 0.67 | 0.66 | 0.85 | 1.52 | 10437 | 1371 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XA3 | 33086 | 2023-10-04 | 2022-03-17 | 2.9 | 2.18 | — | 2.1 | 0.005 | 0.85 | 0.0 | 0.05 | 7.87 | 0.01 | 2.250 | 4.13 | 0.00 | 2.5 | 97.5 | 0.0 | 0.60 | 0.75 | 0.74 | 3.21 | 1.8 | 0.003 | 0.62 | 0.0 | 0.04 | 14.17 | 0.00 | 2.192 | 9.41 | 2.38 | 3.4 | 96.6 | 0.0 | 1.61 | 1.17 | 0.78 | 0.78 | 2.75 | 9591 | 1220 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Bo5 | 7119 | 2023-10-08 | 2017-11-18 | 3.6 | 3.71 | — | 3.6 | 0.005 | 1.08 | 0.0 | 0.05 | 12.89 | 0.01 | 2.277 | 11.47 | 1.84 | 9.1 | 90.5 | 0.4 | -5.44 | 0.66 | 0.72 | 1.16 | 3.6 | 0.004 | 0.81 | 0.0 | 0.04 | 14.72 | 0.00 | 2.166 | 16.85 | 0.11 | 8.8 | 91.2 | 0.0 | -1.26 | 1.45 | 0.66 | 0.72 | 0.86 | 17236 | 2228 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TTW | 26125 | 2023-10-13 | 2022-02-02 | 2.9 | 2.35 | 2.83 | 2.8 | 0.003 | 0.54 | 0.0 | 0.03 | 15.04 | 0.00 | 2.065 | 3.74 | 0.04 | 4.3 | 95.7 | 0.0 | -2.03 | 0.71 | 0.80 | 3.36 | 2.8 | 0.004 | 0.70 | 0.0 | 0.04 | 16.28 | 0.01 | 2.016 | 4.34 | 3.64 | 5.7 | 94.3 | 0.0 | -1.99 | 0.26 | 0.73 | 0.86 | 2.89 | 80853 | 2661 | 27 | 2801 | 0 | 0 | 0 | logfile |
✔ | 7N9Y | 24264 | 2023-10-03 | 2021-06-18 | 4.8 | 4.30 | — | 2.2 | 0.019 | 1.07 | 0.0 | 0.00 | 6.04 | 0.00 | 2.538 | 0.59 | 0.00 | 8.5 | 91.1 | 0.3 | -1.98 | 0.49 | 0.33 | — | 2.2 | 0.003 | 1.01 | 0.0 | 0.00 | 4.81 | 0.00 | 2.550 | 7.73 | 0.00 | 18.2 | 81.3 | 0.5 | -4.24 | 2.61 | 0.52 | 0.31 | — | 7515 | 2505 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MXL | 24073 | 2023-10-05 | 2021-05-19 | 3.2 | 3.53 | — | 3.4 | 0.004 | 0.61 | 0.0 | 0.04 | 13.08 | 0.00 | 2.106 | 11.34 | 0.08 | 5.7 | 94.3 | 0.0 | -1.92 | 0.78 | 0.85 | 3.40 | 3.4 | 0.005 | 0.65 | 0.0 | 0.04 | 14.81 | 0.00 | 2.080 | 12.46 | 0.25 | 6.6 | 93.4 | 0.1 | -1.31 | 0.33 | 0.78 | 0.86 | 3.00 | 10866 | 1422 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QXE | 4666 | 2023-10-19 | 2019-03-07 | 4.15 | 4.14 | — | 4.0 | 0.008 | 0.92 | 0.0 | 0.05 | 14.95 | 0.01 | 1.734 | 14.58 | 0.13 | 7.5 | 92.3 | 0.2 | -3.74 | 0.67 | 0.54 | — | 4.0 | 0.004 | 0.70 | 0.0 | 0.04 | 14.22 | 0.00 | 1.853 | 18.96 | 0.00 | 8.3 | 91.6 | 0.1 | -1.44 | 1.76 | 0.77 | 0.73 | — | 40460 | 2626 | 10 | 24 | 0 | 0 | 19050 | logfile |
✔ | 6GTD | 0062 | 2023-10-03 | 2018-06-18 | 4.24 | 4.28 | — | 3.9 | 0.009 | 1.26 | 0.0 | 0.08 | 21.74 | 0.01 | 2.138 | 13.01 | 0.00 | 19.8 | 80.2 | 0.0 | -5.72 | 0.78 | 0.65 | — | 3.8 | 0.006 | 0.87 | 0.0 | 0.06 | 20.34 | 0.00 | 1.987 | 21.68 | 0.00 | 20.9 | 79.1 | 0.0 | -3.16 | 0.98 | 0.79 | 0.67 | — | 6456 | 1269 | 4 | 66 | 0 | 0 | 0 | logfile |
✔ | 6GTE | 0063 | 2023-10-05 | 2018-06-18 | 4.07 | 3.99 | — | 3.9 | 0.009 | 1.11 | 0.0 | 0.06 | 16.15 | 0.01 | 2.232 | 8.08 | 0.75 | 15.6 | 84.3 | 0.1 | -5.76 | 0.73 | 0.71 | — | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 16.41 | 0.00 | 2.158 | 12.71 | 0.11 | 6.6 | 93.4 | 0.0 | -2.97 | 0.83 | 0.72 | 0.69 | — | 10872 | 1274 | 4 | 67 | 0 | 0 | 0 | logfile |
✔ | 8GPN | 34195 | 2023-10-07 | 2022-08-26 | 3.2 | 3.80 | 3.24 | 3.4 | 0.007 | 0.62 | 0.0 | 0.04 | 26.27 | 0.00 | 2.193 | 8.82 | 0.11 | 2.6 | 97.4 | 0.0 | 1.29 | 0.84 | 0.80 | 3.26 | 3.4 | 0.004 | 0.58 | 0.0 | 0.03 | 26.76 | 0.00 | 2.123 | 9.99 | 0.34 | 2.4 | 97.5 | 0.1 | 2.27 | 1.55 | 0.85 | 0.85 | 1.96 | 15047 | 1211 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 6GTC | 0061 | 2023-10-06 | 2018-06-18 | 3.91 | 3.85 | — | 3.8 | 0.004 | 0.94 | 0.0 | 0.05 | 15.72 | 0.01 | 2.275 | 5.90 | 0.86 | 8.8 | 91.2 | 0.0 | -5.69 | 0.70 | 0.67 | 1.97 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 18.47 | 0.00 | 2.078 | 13.49 | 0.00 | 7.2 | 92.8 | 0.0 | -2.88 | 1.41 | 0.71 | 0.69 | 1.56 | 11931 | 1280 | 4 | 65 | 0 | 0 | 0 | logfile |
✔ | 6T93 | 10408 | 2023-10-06 | 2019-10-25 | 3.49 | 4.10 | — | 3.7 | 0.014 | 1.15 | 0.0 | 0.06 | 27.23 | 0.01 | 2.435 | 0.74 | 0.00 | 0.3 | 99.7 | 0.0 | 0.78 | 0.87 | 0.85 | 2.94 | 3.7 | 0.005 | 0.70 | 0.0 | 0.04 | 27.95 | 0.00 | 2.163 | 11.91 | 0.00 | 2.6 | 97.4 | 0.0 | 2.32 | 1.13 | 0.87 | 0.87 | 1.98 | 12199 | 758 | 10 | 302 | 0 | 0 | 0 | logfile |
✔ | 7X6L | 33023 | 2023-10-10 | 2022-03-07 | 3.7 | 2.76 | — | 2.2 | 0.002 | 0.45 | 0.0 | 0.04 | 7.43 | 0.00 | 2.291 | 4.47 | 2.04 | 1.9 | 97.9 | 0.2 | -3.07 | 0.64 | 0.56 | 0.95 | 2.1 | 0.003 | 0.81 | 0.0 | 0.05 | 13.64 | 0.00 | 2.090 | 18.01 | 0.50 | 4.0 | 95.9 | 0.1 | -1.15 | 0.98 | 0.67 | 0.61 | 1.26 | 21486 | 2781 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KAM | 22775 | 2023-10-05 | 2020-10-01 | 3.8 | 4.43 | 3.92 | 4.1 | 0.003 | 0.54 | 0.0 | 0.04 | 11.79 | 0.00 | 2.150 | 5.67 | 0.00 | 3.0 | 96.9 | 0.1 | -1.16 | 0.64 | 0.82 | 1.85 | 4.1 | 0.004 | 0.68 | 0.0 | 0.04 | 14.40 | 0.00 | 2.140 | 9.88 | 0.18 | 3.3 | 96.6 | 0.1 | 1.54 | 0.52 | 0.65 | 0.84 | 1.38 | 10916 | 1445 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GTF | 0064 | 2023-10-05 | 2018-06-18 | 3.63 | 3.94 | — | 3.8 | 0.010 | 1.17 | 0.0 | 0.07 | 16.19 | 0.01 | 2.030 | 10.45 | 0.43 | 15.5 | 84.5 | 0.0 | -5.84 | 0.72 | 0.64 | 1.89 | 3.8 | 0.003 | 0.70 | 0.0 | 0.04 | 17.95 | 0.00 | 2.170 | 14.44 | 0.43 | 7.1 | 92.9 | 0.0 | -3.13 | 1.43 | 0.74 | 0.64 | 1.97 | 10871 | 1280 | 4 | 66 | 0 | 0 | 0 | logfile |
✔ | 7SWN | 25476 | 2023-10-02 | 2021-11-20 | 4.3 | 3.77 | — | 3.5 | 0.007 | 1.06 | 0.0 | 0.06 | 14.58 | 0.01 | 2.203 | 41.73 | 0.00 | 21.9 | 78.1 | 0.0 | -4.82 | 0.57 | 0.68 | — | 3.5 | 0.003 | 0.82 | 0.0 | 0.05 | 13.82 | 0.01 | 2.261 | 21.52 | 0.00 | 11.3 | 88.7 | 0.0 | -3.20 | 2.08 | 0.57 | 0.68 | — | 3283 | 422 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ANZ | 11835 | 2023-10-08 | 2020-10-13 | 3.6 | 2.50 | — | 3.7 | 0.003 | 0.78 | 0.0 | 0.05 | 15.89 | 0.00 | 2.277 | 4.54 | 0.31 | 6.5 | 93.4 | 0.2 | -5.88 | 0.77 | 0.74 | 1.50 | 3.7 | 0.003 | 0.70 | 0.0 | 0.04 | 17.57 | 0.00 | 2.104 | 10.67 | 0.52 | 6.5 | 93.5 | 0.0 | -0.61 | 0.66 | 0.78 | 0.76 | 1.10 | 16751 | 2041 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BZW | 30261 | 2023-10-04 | 2020-04-28 | 4.6 | 7.66 | 4.73 | 6.0 | 0.003 | 0.82 | 0.0 | 0.05 | 15.82 | 0.01 | 2.176 | 28.88 | 0.00 | 19.4 | 80.6 | 0.0 | -5.59 | 0.85 | 0.67 | — | 6.5 | 0.003 | 0.82 | 0.0 | 0.05 | 14.68 | 0.01 | 1.922 | 20.13 | 0.00 | 19.3 | 80.7 | 0.0 | -2.79 | 1.80 | 0.93 | 0.86 | — | 9756 | 1212 | 12 | 0 | 0 | 0 | 0 | logfile |