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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7C8D | 30305 | 2023-10-06 | 2020-05-29 | 3.0 | 2.79 | — | 2.8 | 0.003 | 0.53 | 0.0 | 0.04 | 17.37 | 0.00 | 1.998 | 9.03 | 6.05 | 3.6 | 96.4 | 0.0 | -2.80 | 0.71 | 0.76 | 3.07 | 2.8 | 0.002 | 0.64 | 0.0 | 0.04 | 18.00 | 0.00 | 2.083 | 10.40 | 3.98 | 4.8 | 95.2 | 0.0 | 0.18 | 1.10 | 0.72 | 0.78 | 2.43 | 6359 | 792 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7R9M | 24329 | 2023-10-03 | 2021-06-29 | 4.0 | 4.58 | — | 3.9 | 0.002 | 0.38 | 0.0 | 0.04 | 4.68 | 0.00 | 2.214 | 3.88 | 0.00 | 8.3 | 90.9 | 0.8 | -4.83 | 0.85 | 0.77 | — | 3.9 | 0.002 | 0.54 | 0.0 | 0.04 | 9.14 | 0.00 | 2.110 | 9.06 | 0.00 | 2.6 | 97.4 | 0.0 | -0.08 | 1.73 | 0.86 | 0.79 | — | 7727 | 505 | 1 | 0 | 0 | 0 | 3939 | logfile |
✔ | 7S38 | 24819 | 2023-10-07 | 2021-09-04 | 3.3 | 3.17 | 3.25 | 3.1 | 0.008 | 0.99 | 0.0 | 0.05 | 15.52 | 0.01 | 2.233 | 2.62 | 0.08 | 4.2 | 95.8 | 0.0 | -1.38 | 0.86 | 0.83 | 3.03 | 3.1 | 0.002 | 0.51 | 0.0 | 0.03 | 17.24 | 0.00 | 2.098 | 8.30 | 0.00 | 2.2 | 97.8 | 0.0 | 0.58 | 1.31 | 0.88 | 0.87 | 2.67 | 13987 | 1353 | 4 | 138 | 1 | 0 | 0 | logfile |
✔ | 6SYT | 10347 | 2023-10-09 | 2019-10-01 | 3.45 | 3.54 | — | 3.5 | 0.018 | 1.23 | 0.0 | 0.16 | 9.36 | 0.01 | 1.903 | 3.04 | 0.13 | 7.5 | 92.4 | 0.1 | -5.37 | 0.69 | 0.81 | 4.11 | 3.5 | 0.002 | 0.61 | 0.0 | 0.04 | 13.84 | 0.00 | 2.001 | 5.33 | 0.31 | 3.3 | 96.7 | 0.0 | 0.84 | 0.64 | 0.71 | 0.85 | 2.64 | 18369 | 2369 | 5 | 0 | 216 | 0 | 0 | logfile |
✔ | 7TT1 | 26107 | 2023-10-10 | 2022-01-31 | 4.3 | 4.56 | — | 4.4 | 0.004 | 0.82 | 0.0 | 0.05 | 10.41 | 0.00 | 1.973 | 3.78 | 0.00 | 1.3 | 98.7 | 0.0 | 0.92 | 0.72 | 0.72 | — | 4.4 | 0.002 | 0.60 | 0.0 | 0.04 | 12.79 | 0.00 | 1.974 | 9.71 | 0.00 | 2.9 | 97.1 | 0.0 | 0.01 | 1.54 | 0.72 | 0.75 | — | 20398 | 1329 | 6 | 0 | 0 | 0 | 10005 | logfile |
✔ | 7YAH | 33712 | 2023-10-03 | 2022-06-28 | 3.12 | 3.28 | 3.14 | 3.3 | 0.006 | 0.84 | 0.0 | 0.05 | 15.38 | 0.01 | 2.229 | 8.86 | 0.35 | 2.6 | 97.4 | 0.0 | 0.05 | 0.63 | 0.71 | 1.63 | 3.3 | 0.002 | 0.51 | 0.0 | 0.04 | 15.81 | 0.00 | 2.209 | 10.41 | 0.35 | 2.2 | 97.8 | 0.0 | 1.52 | 0.34 | 0.63 | 0.74 | 1.35 | 7666 | 999 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 7EG1 | 31104 | 2023-10-07 | 2021-03-23 | 3.2 | 3.30 | — | 3.3 | 0.006 | 0.65 | 0.0 | 0.04 | 14.25 | 0.01 | 2.026 | 16.04 | 0.36 | 11.9 | 88.0 | 0.1 | -5.05 | 0.81 | 0.86 | 3.43 | 3.3 | 0.002 | 0.57 | 0.0 | 0.04 | 15.42 | 0.00 | 2.061 | 5.50 | 0.12 | 9.2 | 90.8 | 0.0 | -0.13 | 1.18 | 0.81 | 0.87 | 2.93 | 15260 | 1878 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7YG7 | 33810 | 2023-10-18 | 2022-07-11 | 3.7 | 3.35 | 3.38 | 3.3 | 0.004 | 0.80 | 0.0 | 0.05 | 18.09 | 0.01 | 2.065 | 5.65 | 1.00 | 9.7 | 90.3 | 0.0 | -2.57 | 0.71 | 0.73 | 1.83 | 3.3 | 0.002 | 0.59 | 0.0 | 0.04 | 17.70 | 0.00 | 2.083 | 8.29 | 0.33 | 9.3 | 90.7 | 0.0 | -1.13 | 0.37 | 0.71 | 0.75 | 1.97 | 38035 | 4554 | 12 | 99 | 0 | 0 | 0 | logfile |
✔ | 7T3J | 25660 | 2023-10-13 | 2021-12-08 | 3.2 | 3.05 | — | 3.2 | 0.004 | 0.74 | 0.0 | 0.05 | 16.17 | 0.01 | 2.241 | 6.11 | 0.58 | 4.9 | 95.1 | 0.0 | -1.91 | 0.87 | 0.81 | 1.94 | 3.2 | 0.002 | 0.54 | 0.0 | 0.04 | 16.38 | 0.00 | 2.126 | 12.24 | 0.15 | 5.0 | 95.0 | 0.0 | 0.11 | 0.31 | 0.88 | 0.83 | 1.96 | 27076 | 3349 | 12 | 61 | 0 | 0 | 0 | logfile |
✔ | 6WHC | 21671 | 2023-10-04 | 2020-04-07 | 3.4 | 3.86 | 3.36 | 3.7 | 0.004 | 0.79 | 0.0 | 0.05 | 14.51 | 0.01 | 2.238 | 6.38 | 0.00 | 4.0 | 96.0 | 0.0 | -4.67 | 0.83 | 0.82 | 1.97 | 3.7 | 0.002 | 0.64 | 0.0 | 0.04 | 15.81 | 0.00 | 2.162 | 10.54 | 0.44 | 3.1 | 96.9 | 0.0 | -0.46 | 1.01 | 0.82 | 0.83 | 1.72 | 8709 | 1126 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iHQ | 35452 | 2023-10-12 | 2023-02-23 | 2.71 | 2.92 | 2.80 | 3.0 | 0.004 | 0.59 | 0.0 | 0.05 | 16.58 | 0.01 | 2.095 | 4.22 | 0.62 | 1.6 | 98.4 | 0.0 | -0.68 | 0.69 | 0.86 | 4.05 | 2.9 | 0.002 | 0.46 | 0.0 | 0.04 | 16.77 | 0.00 | 2.099 | 3.82 | 2.19 | 1.3 | 98.7 | 0.0 | -0.14 | 0.19 | 0.71 | 0.87 | 3.87 | 24128 | 3192 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 6SHS | 10204 | 2023-10-03 | 2019-08-08 | 4.4 | 4.36 | — | 4.3 | 0.009 | 1.02 | 0.0 | 0.06 | 12.04 | 0.00 | 2.341 | 25.68 | 0.00 | 21.1 | 78.9 | 0.0 | -5.87 | 0.69 | 0.62 | — | 4.4 | 0.002 | 0.64 | 0.0 | 0.05 | 12.90 | 0.00 | 2.248 | 6.00 | 0.00 | 16.4 | 83.6 | 0.0 | -5.26 | 1.68 | 0.73 | 0.71 | — | 7068 | 480 | 12 | 0 | 0 | 0 | 3408 | logfile |
✔ | 7C8K | 30306 | 2023-10-04 | 2020-06-02 | 3.2 | 3.18 | — | 3.1 | 0.002 | 0.51 | 0.0 | 0.05 | 13.62 | 0.00 | 2.001 | 4.88 | 0.00 | 3.2 | 96.8 | 0.0 | -1.52 | 0.82 | 0.78 | 2.09 | 3.2 | 0.002 | 0.53 | 0.0 | 0.04 | 15.61 | 0.00 | 2.224 | 7.42 | 0.20 | 3.4 | 96.6 | 0.0 | 1.64 | 1.13 | 0.85 | 0.83 | 2.87 | 4853 | 596 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 7M3J | 23655 | 2023-10-05 | 2021-03-18 | 4.1 | 3.93 | — | 3.9 | 0.010 | 1.10 | 3.0 | 0.07 | 11.75 | 0.01 | 2.274 | 2.71 | 0.12 | 5.8 | 94.2 | 0.0 | -2.70 | 0.82 | 0.82 | — | 3.9 | 0.002 | 0.58 | 0.0 | 0.04 | 11.67 | 0.00 | 2.300 | 4.24 | 0.00 | 4.2 | 95.8 | 0.0 | -0.50 | 1.18 | 0.82 | 0.81 | — | 11001 | 1562 | 5 | 0 | 11 | 0 | 0 | logfile |
✔ | 6QK7 | 4571 | 2023-10-10 | 2019-01-28 | 3.3 | 3.70 | 3.35 | 3.4 | 0.004 | 0.75 | 0.0 | 0.06 | 10.67 | 0.01 | 1.993 | 6.24 | 0.44 | 9.2 | 90.8 | 0.0 | -4.70 | 0.86 | 0.82 | 2.57 | 3.4 | 0.002 | 0.64 | 0.0 | 0.04 | 13.28 | 0.00 | 2.138 | 7.84 | 0.22 | 6.7 | 93.3 | 0.0 | -1.45 | 2.78 | 0.87 | 0.87 | 1.84 | 20790 | 2592 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 7DHR | 30682 | 2023-10-03 | 2020-11-17 | 3.8 | 3.96 | — | 3.9 | 0.004 | 0.86 | 0.0 | 0.05 | 14.18 | 0.01 | 2.329 | 3.92 | 0.31 | 9.1 | 90.8 | 0.1 | -6.33 | 0.70 | 0.77 | 3.13 | 3.9 | 0.002 | 0.61 | 0.0 | 0.04 | 15.36 | 0.00 | 2.231 | 7.99 | 0.77 | 5.7 | 94.3 | 0.0 | -3.21 | 0.46 | 0.69 | 0.76 | 1.86 | 7057 | 977 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7R9E | 24324 | 2023-10-03 | 2021-06-29 | 4.0 | 4.83 | — | 3.9 | 0.002 | 0.37 | 0.0 | 0.04 | 4.45 | 0.00 | 2.277 | 3.11 | 0.00 | 9.9 | 88.7 | 1.4 | -3.58 | 0.87 | 0.80 | — | 3.9 | 0.002 | 0.56 | 0.0 | 0.04 | 9.08 | 0.00 | 2.177 | 7.90 | 0.00 | 5.0 | 95.0 | 0.0 | 0.09 | 1.76 | 0.88 | 0.82 | — | 7726 | 505 | 1 | 0 | 0 | 0 | 3938 | logfile |
✔ | 6LN5 | 0924 | 2023-10-03 | 2019-12-28 | 2.8 | 2.93 | 2.78 | 2.9 | 0.005 | 0.63 | 0.0 | 0.04 | 12.32 | 0.00 | 2.027 | 5.32 | 0.12 | 2.0 | 98.0 | 0.0 | -4.16 | 0.68 | 0.83 | 3.56 | 2.9 | 0.002 | 0.53 | 0.0 | 0.04 | 16.29 | 0.00 | 2.241 | 5.89 | 1.97 | 1.7 | 98.3 | 0.0 | 0.73 | 1.33 | 0.68 | 0.85 | 3.01 | 7840 | 1011 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6LMW | 0922 | 2023-10-05 | 2019-12-26 | 3.4 | 3.55 | 3.21 | 3.5 | 0.007 | 0.91 | 0.0 | 0.05 | 15.33 | 0.01 | 2.292 | 2.21 | 0.63 | 1.6 | 98.4 | 0.0 | -5.34 | 0.53 | 0.73 | 3.03 | 3.5 | 0.002 | 0.63 | 0.0 | 0.04 | 16.35 | 0.00 | 2.228 | 5.83 | 1.18 | 1.1 | 98.9 | 0.0 | 2.21 | 0.44 | 0.66 | 0.83 | 2.32 | 11624 | 1472 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZDQ | 14666 | 2023-10-03 | 2022-03-29 | 3.2 | 2.77 | 3.10 | 2.9 | 0.003 | 0.56 | 0.0 | 0.04 | 15.22 | 0.00 | 2.212 | 6.47 | 0.15 | 2.3 | 97.7 | 0.0 | 1.48 | 0.71 | 0.81 | 3.08 | 3.1 | 0.002 | 0.48 | 0.0 | 0.04 | 16.22 | 0.00 | 2.230 | 5.65 | 0.15 | 2.5 | 97.5 | 0.0 | 1.61 | 0.27 | 0.71 | 0.83 | 3.05 | 6264 | 763 | 3 | 0 | 3 | 0 | 0 | logfile |