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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8G3K | 29700 | 2023-10-02 | 2023-02-08 | 2.2 | 2.34 | 2.21 | 2.3 | 0.002 | 0.36 | 0.0 | 0.03 | 9.98 | 0.00 | 2.348 | 3.50 | 0.00 | 0.7 | 99.3 | 0.0 | 5.07 | 0.46 | 0.82 | 4.79 | 2.3 | 0.002 | 0.47 | 0.0 | 0.03 | 17.12 | 0.00 | 2.333 | 3.72 | 0.41 | 0.7 | 99.3 | 0.0 | 4.78 | 1.17 | 0.47 | 0.83 | 4.98 | 2244 | 285 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XLG | 22243 | 2023-10-06 | 2020-06-28 | 2.71 | 2.81 | — | 2.8 | 0.001 | 0.36 | 0.0 | 0.04 | 10.12 | 0.00 | 2.105 | 5.84 | 0.00 | 1.3 | 98.7 | 0.0 | -3.01 | 0.73 | 0.81 | 4.05 | 2.8 | 0.003 | 0.58 | 0.0 | 0.04 | 16.70 | 0.00 | 1.943 | 10.00 | 2.08 | 2.2 | 97.8 | 0.0 | -0.25 | 3.18 | 0.78 | 0.89 | 4.23 | 12258 | 1504 | 6 | 0 | 6 | 0 | 0 | logfile |
✘ | 7Fii | 31598 | 2023-10-05 | 2021-07-31 | 4.3 | 4.37 | — | 4.1 | 0.002 | 0.36 | 0.0 | 0.04 | 8.97 | 0.00 | 2.073 | 1.66 | 0.00 | 0.9 | 99.1 | 0.0 | 3.08 | 0.64 | 0.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8765 | 1522 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X32 | 22015 | 2023-10-06 | 2020-05-21 | 3.8 | 3.75 | — | 3.9 | 0.001 | 0.36 | 0.0 | 0.03 | 7.99 | 0.00 | 2.266 | 3.27 | 0.00 | 1.4 | 98.6 | 0.0 | -3.72 | 0.56 | 0.69 | 2.26 | 3.9 | 0.004 | 0.67 | 0.0 | 0.04 | 13.24 | 0.00 | 2.114 | 9.22 | 0.43 | 3.1 | 96.9 | 0.0 | 0.55 | 1.68 | 0.60 | 0.74 | 1.86 | 114280 | 14744 | 16 | 0 | 1416 | 0 | 0 | logfile |
✔ | 8C91 | 16498 | 2023-10-04 | 2023-01-21 | 4.19 | 4.74 | 4.70 | 4.2 | 0.001 | 0.36 | 0.0 | 0.03 | 12.73 | 0.00 | 1.896 | 5.51 | 0.07 | 3.8 | 96.1 | 0.2 | 0.39 | 0.84 | 0.79 | — | 4.2 | 0.005 | 0.67 | 0.0 | 0.04 | 16.34 | 0.01 | 1.963 | 29.65 | 0.00 | 9.5 | 90.4 | 0.1 | -2.03 | 0.92 | 0.86 | 0.85 | — | 59110 | 1860 | 18 | 2077 | 0 | 0 | 0 | logfile |
✔ | 8C96 | 16503 | 2023-10-20 | 2023-01-21 | 4.43 | 5.03 | 4.86 | 4.4 | 0.001 | 0.36 | 0.0 | 0.03 | 13.38 | 0.00 | 1.928 | 6.57 | 0.08 | 3.8 | 96.1 | 0.1 | 0.57 | 0.83 | 0.79 | — | 4.4 | 0.005 | 0.67 | 0.0 | 0.04 | 16.37 | 0.01 | 2.010 | 33.68 | 0.00 | 7.6 | 92.4 | 0.0 | -1.68 | 0.89 | 0.84 | 0.85 | — | 44214 | 1607 | 16 | 1475 | 0 | 0 | 0 | logfile |
✔ | 8D9K | 27264 | 2023-10-03 | 2022-06-10 | 3.72 | 4.58 | 3.85 | 4.1 | 0.001 | 0.37 | 0.0 | 0.03 | 9.12 | 0.00 | 2.270 | 6.46 | 0.64 | 1.9 | 98.1 | 0.0 | 1.53 | 0.89 | 0.84 | 2.42 | 4.1 | 0.002 | 0.48 | 0.0 | 0.04 | 11.57 | 0.00 | 2.195 | 8.61 | 0.00 | 2.1 | 97.9 | 0.0 | 0.79 | 0.56 | 0.89 | 0.85 | 2.25 | 5708 | 546 | 3 | 65 | 0 | 0 | 0 | logfile |
✔ | 7TCP | 25816 | 2023-10-07 | 2021-12-27 | 3.84 | 3.97 | — | 3.9 | 0.002 | 0.37 | 0.0 | 0.03 | 9.57 | 0.00 | 2.327 | 4.21 | 1.26 | 2.8 | 97.2 | 0.0 | 2.66 | 0.70 | 0.81 | 2.29 | 3.9 | 0.003 | 0.50 | 0.0 | 0.04 | 12.75 | 0.00 | 2.113 | 5.39 | 0.60 | 3.3 | 96.7 | 0.0 | 2.51 | 0.36 | 0.71 | 0.83 | 2.44 | 14992 | 1912 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 8FEJ | 29029 | 2023-10-05 | 2022-12-06 | 4.64 | 5.33 | 4.68 | 4.6 | 0.001 | 0.37 | 0.0 | 0.04 | 13.97 | 0.00 | 2.253 | 6.27 | 4.30 | 2.9 | 96.9 | 0.2 | 0.48 | 0.88 | 0.69 | — | 4.5 | 0.002 | 0.56 | 0.0 | 0.04 | 12.24 | 0.00 | 2.204 | 9.64 | 0.00 | 6.1 | 93.7 | 0.2 | -0.44 | 1.31 | 0.91 | 0.74 | — | 10464 | 1368 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TJ2 | 25915 | 2023-10-08 | 2022-01-14 | 3.2 | 3.32 | — | 3.4 | 0.002 | 0.37 | 0.0 | 0.04 | 8.62 | 0.00 | 2.196 | 3.77 | 1.64 | 2.4 | 97.6 | 0.0 | 0.18 | 0.69 | 0.76 | 3.52 | 3.3 | 0.005 | 0.55 | 0.0 | 0.04 | 13.57 | 0.00 | 2.187 | 6.25 | 0.23 | 3.5 | 96.5 | 0.0 | -0.10 | 2.83 | 0.71 | 0.82 | 3.46 | 17083 | 2007 | 8 | 62 | 0 | 0 | 0 | logfile |
✔ | 7R9E | 24324 | 2023-10-03 | 2021-06-29 | 4.0 | 4.83 | — | 3.9 | 0.002 | 0.37 | 0.0 | 0.04 | 4.45 | 0.00 | 2.277 | 3.11 | 0.00 | 9.9 | 88.7 | 1.4 | -3.58 | 0.87 | 0.80 | — | 3.9 | 0.002 | 0.56 | 0.0 | 0.04 | 9.08 | 0.00 | 2.177 | 7.90 | 0.00 | 5.0 | 95.0 | 0.0 | 0.09 | 1.76 | 0.88 | 0.82 | — | 7726 | 505 | 1 | 0 | 0 | 0 | 3938 | logfile |
✔ | 6X35 | 22018 | 2023-10-04 | 2020-05-21 | 4.2 | 4.14 | — | 4.2 | 0.001 | 0.37 | 0.0 | 0.03 | 8.42 | 0.00 | 2.202 | 3.37 | 0.05 | 1.8 | 98.1 | 0.0 | -1.11 | 0.52 | 0.67 | — | 4.1 | 0.003 | 0.64 | 0.0 | 0.04 | 11.49 | 0.00 | 2.229 | 8.53 | 0.02 | 3.2 | 96.8 | 0.0 | 1.06 | 1.69 | 0.57 | 0.72 | — | 111888 | 14740 | 16 | 0 | 1432 | 0 | 0 | logfile |
✔ | 6NEQ | 9358 | 2023-10-06 | 2018-12-18 | 3.32 | 3.85 | — | 3.5 | 0.001 | 0.37 | 0.0 | 0.03 | 12.81 | 0.00 | 1.949 | 3.29 | 0.35 | 10.3 | 88.1 | 1.6 | -2.42 | 0.69 | 0.51 | 0.07 | 3.5 | 0.004 | 0.69 | 0.0 | 0.04 | 16.41 | 0.00 | 2.052 | 13.48 | 0.54 | 6.0 | 93.9 | 0.1 | -0.50 | 2.02 | 0.85 | 0.85 | 1.54 | 65776 | 5509 | 32 | 952 | 147 | 0 | 0 | logfile |
✔ | 6X33 | 22016 | 2023-10-05 | 2020-05-21 | 4.2 | 4.35 | — | 4.3 | 0.001 | 0.37 | 0.0 | 0.03 | 9.39 | 0.00 | 2.304 | 3.24 | 0.00 | 1.9 | 98.1 | 0.0 | -4.22 | 0.55 | 0.69 | — | 4.3 | 0.003 | 0.64 | 0.0 | 0.04 | 11.75 | 0.00 | 2.056 | 8.49 | 0.06 | 3.0 | 97.0 | 0.0 | 0.21 | 0.65 | 0.57 | 0.72 | — | 112372 | 14796 | 16 | 0 | 1436 | 0 | 0 | logfile |
✔ | 7TQV | 26073 | 2023-10-08 | 2022-01-27 | 3.43 | 3.72 | — | 3.7 | 0.002 | 0.38 | 0.0 | 0.04 | 7.79 | 0.00 | 2.162 | 5.00 | 0.82 | 3.8 | 96.2 | 0.0 | -0.34 | 0.68 | 0.69 | 2.18 | 3.6 | 0.002 | 0.56 | 0.0 | 0.04 | 12.71 | 0.00 | 2.214 | 7.27 | 0.27 | 3.4 | 96.6 | 0.0 | -0.43 | 1.51 | 0.73 | 0.77 | 2.15 | 17792 | 2083 | 8 | 66 | 0 | 0 | 0 | logfile |
✔ | 7R9M | 24329 | 2023-10-03 | 2021-06-29 | 4.0 | 4.58 | — | 3.9 | 0.002 | 0.38 | 0.0 | 0.04 | 4.68 | 0.00 | 2.214 | 3.88 | 0.00 | 8.3 | 90.9 | 0.8 | -4.83 | 0.85 | 0.77 | — | 3.9 | 0.002 | 0.54 | 0.0 | 0.04 | 9.14 | 0.00 | 2.110 | 9.06 | 0.00 | 2.6 | 97.4 | 0.0 | -0.08 | 1.73 | 0.86 | 0.79 | — | 7727 | 505 | 1 | 0 | 0 | 0 | 3939 | logfile |
✘ | 7VF9 | 31948 | 2023-10-12 | 2021-09-10 | 4.04 | 4.13 | — | 4.1 | 0.001 | 0.38 | 0.0 | 0.04 | 9.65 | 0.00 | 2.176 | 3.71 | 0.05 | 1.5 | 98.5 | 0.0 | -4.44 | 0.74 | 0.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24247 | 3425 | 7 | 0 | 3 | 0 | 0 | logfile |
✔ | 7T4M | 25680 | 2023-10-18 | 2021-12-10 | 2.48 | 2.77 | 2.55 | 2.7 | 0.001 | 0.38 | 0.0 | 0.04 | 9.69 | 0.00 | 2.253 | 4.85 | 0.97 | 1.6 | 98.4 | 0.0 | 1.34 | 0.72 | 0.86 | 4.48 | 2.7 | 0.002 | 0.49 | 0.0 | 0.04 | 12.83 | 0.00 | 2.168 | 5.88 | 0.67 | 1.3 | 98.7 | 0.0 | 1.57 | 0.90 | 0.74 | 0.88 | 3.95 | 39054 | 4854 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8C90 | 16497 | 2023-10-06 | 2023-01-21 | 3.15 | 3.51 | 3.31 | 3.1 | 0.002 | 0.38 | 0.0 | 0.03 | 13.26 | 0.00 | 1.866 | 5.45 | 0.00 | 5.1 | 94.8 | 0.0 | 0.48 | 0.79 | 0.79 | 1.77 | 3.2 | 0.004 | 0.56 | 0.0 | 0.03 | 14.77 | 0.00 | 2.050 | 12.64 | 0.56 | 6.6 | 93.3 | 0.0 | -0.69 | 0.48 | 0.81 | 0.84 | 1.69 | 64726 | 2183 | 22 | 2219 | 0 | 0 | 0 | logfile |
✔ | 7JSE | 22451 | 2023-10-06 | 2020-08-14 | 4.6 | 5.13 | — | 4.2 | 0.001 | 0.38 | 0.0 | 0.02 | 10.51 | 0.00 | 2.425 | 0.00 | 0.00 | 11.4 | 88.0 | 0.6 | -2.68 | 0.79 | 0.50 | — | 3.9 | 0.007 | 1.10 | 0.0 | 0.09 | 14.86 | 0.00 | 2.156 | 11.87 | 0.00 | 20.1 | 79.9 | 0.0 | -3.21 | 2.77 | 0.87 | 0.64 | — | 13288 | 3168 | 24 | 32 | 0 | 0 | 0 | logfile |