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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7R7C | 24297 | 2023-10-07 | 2021-06-24 | 3.71 | 3.61 | 3.17 | 3.3 | 0.002 | 0.53 | 0.0 | 0.04 | 15.84 | 0.00 | 2.134 | 11.12 | 0.00 | 4.8 | 95.2 | 0.0 | -0.30 | 0.74 | 0.77 | 2.08 | 3.3 | 0.006 | 0.74 | 0.0 | 0.04 | 17.47 | 0.01 | 2.048 | 18.15 | 0.27 | 6.6 | 93.4 | 0.0 | -0.68 | 0.43 | 0.75 | 0.79 | 2.16 | 14950 | 1273 | 11 | 226 | 0 | 0 | 0 | logfile |
✘ | 8BF8 | 16016 | 2023-10-03 | 2022-10-24 | 2.8 | 3.14 | 2.80 | 3.1 | 0.003 | 0.47 | 0.0 | 0.03 | 13.85 | 0.00 | 2.203 | 8.73 | 0.93 | 2.7 | 97.3 | 0.0 | 0.92 | 0.64 | 0.76 | 2.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4686 | 302 | 2 | 111 | 0 | 0 | 0 | logfile |
✔ | 6TDV | 10468 | 2023-10-17 | 2019-11-10 | 2.8 | 3.00 | 2.85 | 3.0 | 0.009 | 1.08 | 0.0 | 0.04 | 16.68 | 0.00 | 2.093 | 3.34 | 0.00 | 2.6 | 97.4 | 0.0 | -1.24 | 0.66 | 0.82 | 4.29 | 3.0 | 0.003 | 0.63 | 0.0 | 0.04 | 17.08 | 0.00 | 1.961 | 7.68 | 0.94 | 1.8 | 98.2 | 0.0 | 1.92 | 0.78 | 0.64 | 0.84 | 4.01 | 92262 | 5464 | 62 | 0 | 61 | 0 | 44516 | logfile |
✔ | 6ZFP | 11185 | 2023-10-14 | 2020-06-17 | 3.24 | 3.95 | 3.34 | 3.7 | 0.006 | 0.70 | 0.0 | 0.05 | 14.34 | 0.00 | 2.198 | 9.71 | 0.12 | 8.4 | 91.5 | 0.1 | -1.19 | 0.83 | 0.83 | 1.85 | 3.7 | 0.002 | 0.61 | 0.0 | 0.04 | 15.64 | 0.00 | 2.202 | 7.49 | 0.22 | 5.8 | 94.1 | 0.1 | 0.31 | 0.76 | 0.80 | 0.77 | 1.22 | 29385 | 3676 | 1 | 0 | 28 | 0 | 0 | logfile |
✔ | 7RRP | 24665 | 2023-10-11 | 2021-08-10 | 1.27 | 1.32 | — | 1.4 | 0.003 | 0.61 | 0.0 | 0.04 | 14.22 | 0.00 | 2.007 | 2.86 | 0.00 | 2.4 | 97.6 | 0.0 | 4.01 | 0.63 | 0.76 | 9.05 | 1.4 | 0.004 | 0.70 | 0.0 | 0.04 | 14.36 | 0.01 | 2.041 | 1.86 | 0.00 | 1.8 | 98.2 | 0.0 | 3.90 | 0.41 | 0.70 | 0.83 | 9.05 | 72254 | 4128 | 72 | 0 | 278 | 2496 | 34080 | logfile |
✔ | 6S6L | 10103 | 2023-10-05 | 2019-07-03 | 3.1 | 2.99 | 2.95 | 2.9 | 0.014 | 1.12 | 0.0 | 0.07 | 9.31 | 0.01 | 2.263 | 5.39 | 0.16 | 5.3 | 94.7 | 0.0 | -2.85 | 0.39 | 0.65 | 3.67 | 2.9 | 0.002 | 0.59 | 0.0 | 0.04 | 12.12 | 0.01 | 2.158 | 8.90 | 0.24 | 3.5 | 96.5 | 0.0 | -0.82 | 0.55 | 0.40 | 0.66 | 2.99 | 11587 | 1510 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KC0 | 22803 | 2023-10-09 | 2020-10-04 | 3.2 | 3.58 | — | 3.3 | 0.005 | 0.66 | 0.0 | 0.05 | 15.92 | 0.00 | 2.210 | 11.20 | 2.90 | 6.0 | 94.0 | 0.0 | -3.23 | 0.84 | 0.79 | 1.65 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 17.10 | 0.00 | 1.968 | 12.78 | 0.24 | 6.7 | 93.3 | 0.0 | -1.16 | 0.53 | 0.85 | 0.82 | 1.61 | 19553 | 2334 | 10 | 47 | 4 | 0 | 0 | logfile |
✔ | 8D0Z | 27113 | 2023-10-11 | 2022-05-26 | 3.7 | 3.01 | 3.67 | 3.4 | 0.021 | 1.79 | 0.0 | 0.10 | 9.95 | 0.01 | 2.116 | 1.66 | 0.08 | 2.9 | 97.1 | 0.0 | 0.76 | 0.59 | 0.75 | 2.57 | 3.3 | 0.003 | 0.65 | 0.0 | 0.04 | 14.88 | 0.00 | 2.194 | 9.42 | 0.40 | 4.1 | 95.9 | 0.0 | 0.38 | 0.87 | 0.59 | 0.76 | 1.98 | 22566 | 2878 | 8 | 0 | 11 | 0 | 0 | logfile |
✔ | 8EUi | 24423 | 2023-10-09 | 2022-10-18 | 3.1 | 3.13 | — | 3.1 | 0.004 | 0.52 | 0.0 | 0.03 | 15.20 | 0.00 | 2.143 | 7.87 | 0.18 | 3.8 | 96.2 | 0.1 | -0.02 | 0.82 | 0.81 | 3.11 | 3.1 | 0.008 | 0.72 | 0.0 | 0.05 | 15.56 | 0.01 | 2.025 | 8.95 | 0.32 | 4.6 | 95.4 | 0.0 | 0.09 | 0.27 | 0.83 | 0.83 | 2.71 | 122892 | 7155 | 47 | 3131 | 1 | 0 | 0 | logfile |
✔ | 7W85 | 32352 | 2023-10-14 | 2021-12-07 | 2.94 | 3.13 | — | 3.1 | 0.008 | 0.76 | 0.0 | 0.05 | 13.72 | 0.00 | 2.070 | 9.39 | 0.00 | 5.6 | 94.4 | 0.0 | -0.79 | 0.64 | 0.63 | 2.89 | 3.1 | 0.004 | 0.68 | 0.0 | 0.04 | 16.34 | 0.00 | 1.913 | 9.86 | 1.46 | 5.1 | 94.9 | 0.0 | 0.06 | 1.59 | 0.75 | 0.86 | 2.58 | 81522 | 10440 | 48 | 0 | 42 | 0 | 0 | logfile |
✔ | 7CF9 | 30343 | 2023-10-06 | 2020-06-24 | 4.7 | 4.24 | 5.21 | 4.0 | 0.006 | 1.24 | 0.0 | 0.06 | 16.01 | 0.01 | 1.538 | 5.47 | 1.67 | 6.2 | 93.7 | 0.1 | -4.86 | 0.79 | 0.68 | — | 4.0 | 0.003 | 0.76 | 0.0 | 0.04 | 13.67 | 0.00 | 2.032 | 14.49 | 0.00 | 5.5 | 94.5 | 0.0 | -2.02 | 1.79 | 0.81 | 0.74 | — | 116104 | 14416 | 12 | 0 | 1820 | 0 | 0 | logfile |
✔ | 7D84 | 30612 | 2023-10-19 | 2020-10-07 | 3.7 | 4.34 | 3.76 | 4.2 | 0.009 | 0.90 | 0.0 | 0.05 | 15.25 | 0.01 | 2.271 | 6.09 | 7.78 | 2.1 | 97.9 | 0.0 | -2.70 | 0.84 | 0.84 | 2.66 | 4.2 | 0.004 | 0.82 | 0.0 | 0.04 | 17.37 | 0.00 | 2.048 | 13.02 | 0.56 | 0.7 | 99.3 | 0.0 | 0.33 | 1.37 | 0.82 | 0.81 | 2.81 | 42704 | 5406 | 34 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YQ5 | 34020 | 2023-10-07 | 2022-08-05 | 4.27 | 4.54 | 4.30 | 4.4 | 0.014 | 1.24 | 0.0 | 0.07 | 17.22 | 0.02 | 2.256 | 5.39 | 0.59 | 9.3 | 90.7 | 0.0 | -4.10 | 0.74 | 0.68 | — | 4.4 | 0.002 | 0.85 | 0.0 | 0.05 | 15.91 | 0.01 | 2.158 | 10.13 | 0.13 | 7.1 | 92.9 | 0.0 | -1.98 | 1.27 | 0.78 | 0.78 | — | 14067 | 1673 | 5 | 24 | 0 | 0 | 0 | logfile |
✔ | 7ZDT | 14669 | 2023-10-04 | 2022-03-29 | 2.71 | 2.89 | 2.68 | 2.9 | 0.005 | 0.66 | 0.0 | 0.04 | 13.49 | 0.00 | 1.945 | 6.38 | 0.00 | 1.3 | 98.7 | 0.0 | -0.81 | 0.76 | 0.90 | 3.85 | 2.9 | 0.004 | 0.55 | 0.0 | 0.04 | 15.76 | 0.00 | 1.944 | 5.22 | 1.28 | 1.7 | 98.3 | 0.0 | 2.14 | 0.34 | 0.74 | 0.91 | 3.63 | 9003 | 1155 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 7ZDK | 14652 | 2023-10-04 | 2022-03-29 | 3.01 | 3.14 | 2.96 | 3.1 | 0.007 | 0.78 | 0.0 | 0.05 | 14.26 | 0.00 | 2.219 | 7.96 | 0.00 | 1.6 | 98.4 | 0.0 | -1.50 | 0.76 | 0.89 | 3.46 | 3.1 | 0.002 | 0.51 | 0.0 | 0.04 | 15.53 | 0.00 | 1.980 | 6.33 | 0.11 | 1.9 | 98.1 | 0.0 | 1.56 | 0.33 | 0.72 | 0.90 | 2.61 | 9089 | 1161 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7CN9 | 30419 | 2023-10-11 | 2020-07-30 | 4.7 | 4.78 | — | 4.7 | 0.011 | 1.19 | 0.0 | 0.07 | 15.51 | 0.01 | 1.927 | 47.47 | 2.39 | 21.4 | 77.5 | 1.1 | -5.89 | 0.53 | 0.74 | — | 4.7 | 0.005 | 0.89 | 0.0 | 0.05 | 13.47 | 0.01 | 2.079 | 22.92 | 0.00 | 13.9 | 86.1 | 0.1 | -3.25 | 1.37 | 0.52 | 0.72 | — | 24052 | 3058 | 19 | 0 | 56 | 0 | 0 | logfile |
✔ | 8EiQ | 28161 | 2023-10-04 | 2022-09-15 | 3.0 | 2.87 | 3.05 | 3.2 | 0.006 | 1.11 | 0.0 | 0.05 | 12.35 | 0.01 | 1.936 | 1.35 | 1.78 | 1.3 | 98.7 | 0.0 | -1.39 | 0.65 | 0.87 | 3.70 | 3.1 | 0.003 | 0.53 | 0.0 | 0.04 | 16.00 | 0.00 | 1.962 | 3.37 | 1.68 | 2.2 | 97.8 | 0.0 | 0.72 | 1.61 | 0.66 | 0.87 | 2.53 | 9578 | 1162 | 3 | 0 | 25 | 0 | 0 | logfile |
✔ | 6XM4 | 22255 | 2023-10-12 | 2020-06-29 | 2.9 | 3.01 | 2.91 | 3.0 | 0.011 | 1.06 | 0.0 | 0.07 | 14.55 | 0.01 | 2.223 | 3.01 | 0.40 | 6.8 | 93.1 | 0.1 | -3.45 | 0.70 | 0.84 | 3.47 | 3.0 | 0.003 | 0.60 | 0.0 | 0.04 | 15.91 | 0.00 | 2.140 | 5.33 | 1.38 | 4.9 | 95.1 | 0.0 | -0.97 | 0.42 | 0.71 | 0.87 | 2.76 | 25398 | 3143 | 24 | 0 | 61 | 0 | 0 | logfile |
✔ | 6ZH4 | 11213 | 2023-10-14 | 2020-06-20 | 3.62 | 4.39 | 3.75 | 4.0 | 0.005 | 0.69 | 0.0 | 0.04 | 14.48 | 0.00 | 2.199 | 14.27 | 0.03 | 7.6 | 92.4 | 0.0 | -0.76 | 0.89 | 0.87 | 1.88 | 4.0 | 0.003 | 0.64 | 0.0 | 0.04 | 15.83 | 0.00 | 2.143 | 11.83 | 0.25 | 6.3 | 93.7 | 0.0 | 0.48 | 0.36 | 0.88 | 0.86 | 1.50 | 29352 | 3670 | 1 | 0 | 28 | 0 | 0 | logfile |
✔ | 6ZXN | 11526 | 2023-10-03 | 2020-07-30 | 2.93 | 3.41 | — | 3.3 | 0.004 | 0.56 | 0.0 | 0.05 | 12.73 | 0.00 | 1.940 | 7.08 | 0.10 | 4.5 | 95.5 | 0.0 | -0.46 | 0.54 | 0.73 | 2.84 | 3.3 | 0.004 | 0.55 | 0.0 | 0.04 | 14.62 | 0.00 | 1.903 | 8.60 | 0.78 | 4.8 | 95.2 | 0.0 | -0.32 | 1.11 | 0.51 | 0.72 | 2.85 | 55098 | 3522 | 21 | 0 | 63 | 0 | 26763 | logfile |