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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7ZKA | 14760 | 2023-10-04 | 2022-04-12 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9406 | 1177 | 1 | 0 | 9 | 4 | 0 | logfile |
✔ | 8G92 | 29860 | 2023-10-02 | 2023-02-21 | 3.6 | 3.86 | 3.44 | 3.8 | 0.005 | 0.66 | 0.0 | 0.04 | 13.69 | 0.00 | 2.219 | 8.32 | 0.00 | 2.4 | 97.6 | 0.0 | -1.13 | 0.56 | 0.81 | 3.18 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 15.22 | 0.00 | 2.241 | 7.55 | 0.60 | 1.0 | 99.0 | 0.0 | 1.88 | 0.98 | 0.55 | 0.81 | 2.07 | 3211 | 415 | 1 | 0 | 1 | 0 | 0 | logfile |
✘ | 7ZK7 | 14757 | 2023-10-04 | 2022-04-12 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9112 | 1158 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 7XoR | 33357 | 2023-10-02 | 2022-05-01 | 3.3 | 3.57 | 3.01 | 3.4 | 0.003 | 0.52 | 0.0 | 0.04 | 12.60 | 0.00 | 2.273 | 9.71 | 0.00 | 1.3 | 98.7 | 0.0 | 2.15 | 0.56 | 0.86 | 2.32 | 3.4 | 0.003 | 0.53 | 0.0 | 0.04 | 14.32 | 0.00 | 2.271 | 10.09 | 0.50 | 1.3 | 98.7 | 0.0 | 2.33 | 0.39 | 0.59 | 0.88 | 2.05 | 3855 | 524 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JMT | 36426 | 2023-10-02 | 2023-06-05 | 3.3 | 3.55 | 3.41 | 3.7 | 0.003 | 0.74 | 0.0 | 0.04 | 14.38 | 0.00 | 2.204 | 8.56 | 0.00 | 3.5 | 96.5 | 0.0 | -0.01 | 0.35 | 0.59 | 1.38 | 3.7 | 0.004 | 0.65 | 0.0 | 0.04 | 16.13 | 0.00 | 2.238 | 11.67 | 0.00 | 4.0 | 96.0 | 0.0 | 1.51 | 1.16 | 0.33 | 0.61 | 0.92 | 1894 | 234 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CUJ | 27001 | 2023-10-02 | 2022-05-17 | 3.04 | 2.55 | 3.04 | 3.2 | 0.002 | 0.53 | 0.0 | 0.04 | 14.73 | 0.00 | 2.276 | 5.90 | 0.00 | 2.1 | 97.9 | 0.0 | 1.48 | 0.44 | 0.80 | 0.86 | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 15.45 | 0.00 | 2.240 | 6.34 | 0.00 | 2.1 | 97.9 | 0.0 | 1.66 | 0.90 | 0.44 | 0.80 | 1.24 | 3293 | 433 | 1 | 0 | 0 | 1 | 0 | logfile |
✔ | 7UGD | 26487 | 2023-10-03 | 2022-03-24 | 2.95 | 3.61 | 2.95 | 3.5 | 0.002 | 0.45 | 0.0 | 0.04 | 11.38 | 0.00 | 2.005 | 2.21 | 0.00 | 0.7 | 99.3 | 0.0 | 0.34 | 0.49 | 0.84 | 3.05 | 3.5 | 0.004 | 0.58 | 0.0 | 0.04 | 14.29 | 0.00 | 2.225 | 3.80 | 0.31 | 0.2 | 99.8 | 0.0 | 2.52 | 0.45 | 0.49 | 0.85 | 2.12 | 3079 | 415 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 7UH3 | 26504 | 2023-10-03 | 2022-03-25 | 2.99 | 3.63 | 2.98 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 10.05 | 0.00 | 1.909 | 4.09 | 0.00 | 2.0 | 98.0 | 0.0 | 0.91 | 0.48 | 0.84 | 2.83 | 3.5 | 0.003 | 0.70 | 0.0 | 0.04 | 13.54 | 0.00 | 2.188 | 8.97 | 1.24 | 2.2 | 97.8 | 0.0 | 1.59 | 1.02 | 0.50 | 0.86 | 1.53 | 3096 | 416 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 7UG0 | 26482 | 2023-10-02 | 2022-03-23 | 2.55 | 3.24 | 2.49 | 3.1 | 0.002 | 0.45 | 0.0 | 0.04 | 10.60 | 0.00 | 2.287 | 2.34 | 0.00 | 1.0 | 99.0 | 0.0 | 2.00 | 0.56 | 0.90 | 3.59 | 3.0 | 0.003 | 0.48 | 0.0 | 0.04 | 12.53 | 0.00 | 2.211 | 4.52 | 0.62 | 1.0 | 99.0 | 0.0 | 3.92 | 1.26 | 0.53 | 0.87 | 2.10 | 3126 | 418 | 1 | 0 | 3 | 4 | 0 | logfile |
✔ | 7UGX | 26498 | 2023-10-03 | 2022-03-25 | 2.96 | 3.60 | 2.95 | 3.5 | 0.002 | 0.50 | 0.0 | 0.04 | 10.61 | 0.00 | 2.234 | 3.61 | 0.00 | 1.5 | 98.5 | 0.0 | 1.81 | 0.48 | 0.83 | 2.71 | 3.5 | 0.003 | 0.63 | 0.0 | 0.04 | 13.34 | 0.00 | 2.184 | 6.27 | 0.62 | 2.2 | 97.8 | 0.0 | 2.70 | 0.98 | 0.49 | 0.88 | 1.91 | 3108 | 416 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 7UH6 | 26505 | 2023-10-03 | 2022-03-25 | 3.44 | 4.04 | 3.47 | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 10.58 | 0.00 | 2.012 | 6.13 | 0.31 | 1.7 | 98.3 | 0.0 | 0.84 | 0.49 | 0.80 | 2.18 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 12.25 | 0.00 | 2.202 | 10.54 | 0.00 | 1.5 | 98.5 | 0.0 | 1.50 | 1.05 | 0.51 | 0.83 | 1.86 | 3095 | 416 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 7Xoo | 33354 | 2023-10-02 | 2022-05-01 | 3.0 | 3.53 | 2.84 | 3.3 | 0.003 | 0.46 | 0.0 | 0.04 | 11.95 | 0.00 | 2.333 | 7.79 | 0.00 | 1.1 | 98.9 | 0.0 | 2.57 | 0.58 | 0.89 | 1.90 | 3.3 | 0.003 | 0.50 | 0.0 | 0.04 | 13.79 | 0.00 | 2.334 | 7.28 | 0.50 | 1.1 | 98.9 | 0.0 | 2.77 | 0.46 | 0.58 | 0.90 | 2.25 | 3855 | 524 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FZQ | 29637 | 2023-10-04 | 2023-01-29 | 4.3 | 3.97 | 4.18 | 4.1 | 0.002 | 0.53 | 0.0 | 0.04 | 14.56 | 0.00 | 1.999 | 8.42 | 0.10 | 2.1 | 97.9 | 0.0 | 1.00 | 0.59 | 0.69 | — | 4.1 | 0.002 | 0.57 | 0.0 | 0.04 | 14.68 | 0.00 | 1.981 | 10.19 | 0.00 | 2.6 | 97.4 | 0.0 | 0.51 | 2.13 | 0.63 | 0.77 | — | 9244 | 1133 | 1 | 0 | 23 | 0 | 0 | logfile |
✔ | 7XTK | 33451 | 2023-10-02 | 2022-05-17 | 2.89 | 3.27 | 2.92 | 3.2 | 0.004 | 0.87 | 0.0 | 0.04 | 13.37 | 0.01 | 1.873 | 9.37 | 0.00 | 6.4 | 92.3 | 1.3 | -1.05 | 0.59 | 0.83 | 2.77 | 3.2 | 0.003 | 0.63 | 0.0 | 0.04 | 14.73 | 0.00 | 2.157 | 7.96 | 1.18 | 6.6 | 92.6 | 0.8 | 0.90 | 1.92 | 0.57 | 0.83 | 1.78 | 3159 | 395 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SiB | 40505 | 2023-10-02 | 2023-04-14 | 2.62 | 3.44 | 2.68 | 3.3 | 0.007 | 1.30 | 0.0 | 0.06 | 11.70 | 0.01 | 2.265 | 4.20 | 0.78 | 12.9 | 85.8 | 1.3 | -5.28 | 0.73 | 0.84 | 3.54 | 3.3 | 0.003 | 0.89 | 0.0 | 0.05 | 15.64 | 0.00 | 2.221 | 13.44 | 2.58 | 13.3 | 86.4 | 0.2 | -1.48 | 2.04 | 0.70 | 0.82 | 2.65 | 3544 | 454 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UGJ | 26489 | 2023-10-02 | 2022-03-24 | 2.81 | 3.45 | 2.86 | 3.2 | 0.002 | 0.50 | 0.0 | 0.04 | 9.70 | 0.00 | 2.285 | 3.79 | 0.00 | 0.7 | 99.3 | 0.0 | 2.01 | 0.54 | 0.89 | 3.90 | 3.3 | 0.003 | 0.61 | 0.0 | 0.04 | 13.16 | 0.00 | 2.201 | 5.69 | 2.22 | 1.0 | 99.0 | 0.0 | 2.83 | 0.57 | 0.51 | 0.86 | 1.70 | 3095 | 416 | 1 | 0 | 3 | 0 | 0 | logfile |
✘ | 5X1G | 6701 | 2023-10-02 | 2017-01-25 | 4.5 | 7.89 | — | 37.0 | 0.008 | 1.42 | 0.0 | 0.05 | 10.05 | 0.01 | 2.345 | 27.78 | 0.00 | 6.9 | 93.1 | 0.0 | -2.75 | 0.00 | 0.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 155 | 31 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HW2 | 35049 | 2023-10-05 | 2022-12-28 | 3.65 | 4.12 | 3.84 | 4.0 | 0.011 | 0.86 | 0.0 | 0.05 | 14.65 | 0.01 | 2.154 | 14.21 | 0.09 | 7.2 | 92.8 | 0.0 | -2.33 | 0.69 | 0.80 | 1.01 | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 16.47 | 0.00 | 2.216 | 12.34 | 0.94 | 6.9 | 93.1 | 0.0 | -1.37 | 1.15 | 0.68 | 0.79 | 1.23 | 10853 | 1375 | 1 | 0 | 2 | 0 | 0 | logfile |
✘ | 3A5X | 1641 | 2023-10-02 | 2009-08-13 | 4.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -4.41 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3616 | 494 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CUD | 26998 | 2023-10-02 | 2022-05-17 | 2.94 | 2.75 | 2.95 | 2.8 | 0.005 | 0.67 | 0.0 | 0.05 | 15.61 | 0.00 | 2.433 | 3.10 | 0.00 | 1.9 | 98.1 | 0.0 | 1.42 | 0.49 | 0.83 | 1.26 | 2.8 | 0.002 | 0.49 | 0.0 | 0.04 | 17.07 | 0.00 | 2.207 | 4.57 | 2.22 | 1.4 | 98.6 | 0.0 | 2.06 | 0.93 | 0.48 | 0.84 | 1.47 | 3294 | 433 | 1 | 0 | 0 | 2 | 0 | logfile |