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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6L54 | 0837 | 2023-10-10 | 2019-10-22 | 3.43 | 3.58 | — | 3.5 | 0.002 | 0.49 | 0.0 | 0.03 | 7.60 | 0.00 | 1.978 | 61.71 | 0.79 | 8.8 | 91.2 | 0.0 | -3.87 | 0.77 | 0.72 | 1.74 | 3.5 | 0.002 | 0.61 | 0.0 | 0.04 | 13.82 | 0.00 | 1.920 | 66.76 | 0.39 | 10.3 | 89.7 | 0.0 | -1.37 | 0.76 | 0.80 | 0.77 | 1.44 | 20387 | 2608 | 3 | 0 | 2 | 0 | 857 | logfile |
✔ | 7V7F | 31769 | 2023-10-12 | 2021-08-21 | 2.9 | 3.82 | — | 3.2 | 0.005 | 0.63 | 0.0 | 0.05 | 13.68 | 0.00 | 2.061 | 7.26 | 0.00 | 5.1 | 94.7 | 0.1 | -0.13 | 0.88 | 0.86 | 2.44 | 3.2 | 0.002 | 0.55 | 0.0 | 0.05 | 15.10 | 0.00 | 2.104 | 6.88 | 1.25 | 4.4 | 95.5 | 0.1 | 0.03 | 0.27 | 0.89 | 0.87 | 2.22 | 25503 | 3114 | 42 | 0 | 84 | 0 | 0 | logfile |
✔ | 7AE3 | 11738 | 2023-10-19 | 2020-09-17 | 3.1 | 3.92 | 3.23 | 3.0 | 0.008 | 0.97 | 1.0 | 0.06 | 11.10 | 0.01 | 1.688 | 3.45 | 0.37 | 4.2 | 95.7 | 0.1 | -4.00 | 0.85 | 0.76 | 1.37 | 3.2 | 0.002 | 0.63 | 0.0 | 0.04 | 13.44 | 0.00 | 1.980 | 8.03 | 0.15 | 3.5 | 96.5 | 0.0 | 0.20 | 1.14 | 0.88 | 0.86 | 2.17 | 42525 | 5232 | 27 | 44 | 9 | 0 | 0 | logfile |
✔ | 6LiD | 0904 | 2023-10-09 | 2019-12-10 | 2.7 | 2.74 | — | 2.7 | 0.007 | 1.00 | 0.0 | 0.06 | 14.18 | 0.01 | 1.890 | 3.67 | 1.96 | 4.8 | 95.1 | 0.1 | -4.84 | 0.62 | 0.74 | 3.13 | 2.7 | 0.002 | 0.70 | 0.0 | 0.05 | 16.03 | 0.00 | 2.197 | 6.69 | 2.06 | 4.0 | 96.0 | 0.0 | 0.14 | 0.61 | 0.72 | 0.87 | 2.82 | 17964 | 2162 | 22 | 0 | 26 | 246 | 0 | logfile |
✔ | 7Uo4 | 26639 | 2023-10-06 | 2022-04-12 | 3.38 | 4.18 | 3.37 | 3.8 | 0.005 | 0.69 | 0.0 | 0.12 | 12.01 | 0.00 | 1.885 | 7.37 | 1.27 | 7.2 | 92.8 | 0.0 | -1.06 | 0.83 | 0.79 | 2.83 | 3.8 | 0.002 | 0.66 | 0.0 | 0.06 | 13.53 | 0.00 | 2.073 | 8.76 | 0.08 | 4.3 | 95.7 | 0.0 | 0.39 | 0.53 | 0.93 | 0.89 | 2.04 | 12470 | 1374 | 12 | 70 | 4 | 91 | 0 | logfile |
✔ | 7L2S | 23139 | 2023-10-10 | 2020-12-17 | 2.71 | 3.03 | 2.68 | 3.0 | 0.007 | 0.95 | 0.0 | 0.25 | 12.59 | 0.00 | 2.157 | 0.85 | 0.68 | 6.0 | 93.9 | 0.0 | 0.35 | 0.65 | 0.89 | 4.03 | 3.0 | 0.002 | 0.58 | 0.0 | 0.04 | 14.77 | 0.00 | 2.152 | 3.85 | 1.35 | 6.1 | 93.9 | 0.0 | 1.17 | 1.00 | 0.62 | 0.89 | 2.71 | 20579 | 2506 | 8 | 0 | 9 | 0 | 0 | logfile |
✔ | 7TVZ | 26142 | 2023-10-09 | 2022-02-06 | 3.6 | 3.77 | — | 3.8 | 0.005 | 0.61 | 0.0 | 0.04 | 13.96 | 0.00 | 2.203 | 4.11 | 0.00 | 2.8 | 97.2 | 0.0 | 0.35 | 0.68 | 0.75 | 2.02 | 3.8 | 0.002 | 0.57 | 0.0 | 0.04 | 15.84 | 0.00 | 2.180 | 5.91 | 0.20 | 2.5 | 97.5 | 0.0 | 0.51 | 2.30 | 0.71 | 0.79 | 1.98 | 18659 | 2340 | 7 | 0 | 9 | 8 | 0 | logfile |
✔ | 7L2R | 23138 | 2023-10-10 | 2020-12-17 | 3.3 | 3.62 | 3.28 | 3.5 | 0.008 | 0.92 | 1.0 | 0.25 | 13.19 | 0.00 | 2.112 | 0.59 | 0.35 | 6.6 | 93.3 | 0.1 | -0.23 | 0.65 | 0.87 | 3.13 | 3.5 | 0.002 | 0.61 | 0.0 | 0.04 | 15.25 | 0.00 | 2.147 | 4.96 | 0.26 | 6.3 | 93.7 | 0.0 | 1.01 | 1.06 | 0.65 | 0.88 | 2.14 | 21377 | 2611 | 15 | 0 | 9 | 4 | 0 | logfile |
✔ | 6PXM | 20521 | 2023-10-16 | 2019-07-26 | 2.1 | 2.33 | 2.32 | 2.4 | 0.008 | 0.71 | 0.0 | 0.04 | 16.03 | 0.00 | 2.392 | 1.60 | 0.00 | 0.6 | 99.4 | 0.0 | -3.44 | 0.79 | 0.89 | 5.35 | 2.3 | 0.002 | 0.43 | 0.0 | 0.03 | 17.64 | 0.00 | 2.214 | 4.08 | 0.03 | 1.8 | 98.2 | 0.0 | 5.31 | 1.48 | 0.79 | 0.90 | 3.81 | 32736 | 4080 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E8M | 27944 | 2023-10-12 | 2022-08-25 | 3.13 | 3.39 | 3.22 | 3.4 | 0.004 | 0.56 | 0.0 | 0.04 | 14.11 | 0.00 | 2.001 | 4.53 | 2.37 | 4.6 | 95.2 | 0.3 | -0.67 | 0.75 | 0.84 | 3.10 | 3.4 | 0.002 | 0.55 | 0.0 | 0.04 | 16.37 | 0.00 | 1.984 | 6.06 | 0.33 | 4.5 | 95.3 | 0.2 | 0.45 | 0.63 | 0.78 | 0.86 | 2.13 | 24573 | 2924 | 9 | 93 | 3 | 0 | 0 | logfile |
✔ | 7Z4C | 14493 | 2023-10-08 | 2022-03-03 | 3.87 | 5.00 | 3.91 | 4.1 | 0.003 | 0.45 | 0.0 | 0.03 | 15.32 | 0.00 | 2.232 | 8.05 | 2.06 | 2.5 | 97.5 | 0.0 | 1.06 | 0.91 | 0.83 | 1.82 | 4.1 | 0.002 | 0.58 | 0.0 | 0.04 | 16.74 | 0.00 | 2.153 | 12.49 | 0.00 | 3.0 | 97.0 | 0.0 | 1.07 | 0.95 | 0.91 | 0.84 | 1.25 | 14180 | 1357 | 4 | 148 | 0 | 0 | 0 | logfile |
✔ | 8DK1 | 27480 | 2023-10-09 | 2022-07-01 | 2.95 | 3.68 | 3.03 | 3.4 | 0.002 | 0.42 | 0.0 | 0.04 | 9.97 | 0.00 | 2.294 | 2.83 | 1.44 | 3.3 | 96.7 | 0.0 | 2.11 | 0.85 | 0.90 | 2.51 | 3.4 | 0.002 | 0.51 | 0.0 | 0.04 | 12.85 | 0.00 | 2.260 | 3.98 | 1.49 | 3.6 | 96.4 | 0.0 | 2.59 | 0.62 | 0.85 | 0.90 | 2.22 | 19500 | 2446 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6T0R | 10357 | 2023-10-07 | 2019-10-03 | 2.82 | 2.90 | 2.91 | 2.9 | 0.005 | 0.66 | 0.0 | 0.05 | 13.99 | 0.01 | 2.279 | 4.08 | 4.99 | 3.5 | 96.5 | 0.0 | -2.98 | 0.69 | 0.85 | 3.55 | 2.9 | 0.002 | 0.51 | 0.0 | 0.04 | 16.58 | 0.00 | 2.117 | 7.12 | 2.79 | 2.9 | 97.1 | 0.0 | 0.77 | 1.04 | 0.69 | 0.86 | 2.94 | 14120 | 1690 | 7 | 20 | 0 | 31 | 0 | logfile |
✔ | 6T0N | 10356 | 2023-10-07 | 2019-10-03 | 2.54 | 2.64 | 2.56 | 2.6 | 0.005 | 0.69 | 0.0 | 0.05 | 14.69 | 0.01 | 2.105 | 3.18 | 4.90 | 4.3 | 95.4 | 0.2 | -2.43 | 0.73 | 0.89 | 4.53 | 2.6 | 0.002 | 0.53 | 0.0 | 0.04 | 16.62 | 0.00 | 1.998 | 7.10 | 1.85 | 1.7 | 98.3 | 0.0 | 1.02 | 0.53 | 0.74 | 0.91 | 4.22 | 14598 | 1703 | 12 | 29 | 2 | 268 | 0 | logfile |
✔ | 7XQF | 33394 | 2023-10-21 | 2022-05-07 | 2.3 | 2.69 | 2.25 | 2.6 | 0.005 | 1.09 | 0.0 | 0.04 | 15.12 | 0.00 | 1.942 | 3.87 | 0.56 | 1.6 | 98.4 | 0.0 | 3.06 | 0.68 | 0.87 | 4.51 | 2.6 | 0.002 | 0.48 | 0.0 | 0.03 | 15.46 | 0.00 | 2.121 | 4.74 | 1.81 | 2.1 | 97.9 | 0.0 | 3.34 | 1.04 | 0.65 | 0.87 | 4.30 | 43140 | 2412 | 36 | 0 | 168 | 492 | 19968 | logfile |
✔ | 8D4A | 27179 | 2023-10-05 | 2022-06-01 | 2.74 | 3.31 | 2.79 | 3.1 | 0.006 | 0.71 | 0.0 | 0.04 | 15.40 | 0.00 | 2.098 | 3.27 | 0.09 | 2.2 | 97.8 | 0.0 | -0.49 | 0.87 | 0.87 | 4.89 | 3.1 | 0.002 | 0.49 | 0.0 | 0.04 | 16.49 | 0.00 | 2.072 | 5.97 | 0.73 | 2.0 | 98.0 | 0.0 | 1.79 | 1.97 | 0.84 | 0.88 | 3.92 | 11798 | 1207 | 6 | 91 | 3 | 1 | 0 | logfile |
✔ | 6S6U | 10106 | 2023-10-14 | 2019-07-03 | 3.5 | 3.61 | 3.48 | 3.6 | 0.024 | 0.99 | 0.0 | 0.11 | 13.17 | 0.00 | 2.058 | 6.00 | 0.44 | 3.4 | 96.6 | 0.0 | -2.83 | 0.80 | 0.86 | 2.14 | 3.6 | 0.002 | 0.86 | 0.0 | 0.05 | 15.04 | 0.00 | 1.785 | 5.90 | 0.13 | 2.7 | 97.3 | 0.0 | -0.23 | 0.51 | 0.80 | 0.86 | 2.00 | 82978 | 10720 | 20 | 0 | 24 | 0 | 0 | logfile |
✔ | 7WSW | 32769 | 2023-10-07 | 2022-02-02 | 3.4 | 3.86 | — | 3.7 | 0.003 | 0.55 | 0.0 | 0.04 | 13.09 | 0.00 | 2.149 | 6.77 | 0.00 | 5.5 | 94.5 | 0.0 | 0.70 | 0.64 | 0.84 | 2.21 | 3.7 | 0.002 | 0.52 | 0.0 | 0.04 | 14.68 | 0.00 | 2.176 | 7.23 | 0.13 | 4.7 | 95.3 | 0.0 | 0.89 | 1.12 | 0.65 | 0.85 | 1.77 | 15051 | 1868 | 8 | 0 | 7 | 0 | 0 | logfile |
✔ | 6SZV | 10355 | 2023-10-07 | 2019-10-02 | 2.5 | 2.59 | 2.51 | 2.6 | 0.005 | 0.62 | 0.0 | 0.04 | 13.15 | 0.01 | 1.763 | 3.79 | 3.65 | 4.6 | 95.3 | 0.1 | -2.79 | 0.68 | 0.85 | 4.62 | 2.6 | 0.002 | 0.52 | 0.0 | 0.04 | 16.45 | 0.00 | 1.925 | 6.85 | 2.06 | 1.7 | 98.3 | 0.0 | 1.01 | 0.99 | 0.72 | 0.89 | 4.44 | 14847 | 1694 | 15 | 41 | 7 | 217 | 0 | logfile |
✔ | 8ASD | 15614 | 2023-10-08 | 2022-08-19 | 2.6 | 2.22 | 2.62 | 2.4 | 0.006 | 0.65 | 0.0 | 0.04 | 13.76 | 0.01 | 2.030 | 3.99 | 0.06 | 3.6 | 96.4 | 0.0 | -0.27 | 0.64 | 0.84 | 4.06 | 2.4 | 0.002 | 0.50 | 0.0 | 0.04 | 16.08 | 0.00 | 1.947 | 5.56 | 0.50 | 3.7 | 96.3 | 0.0 | 0.70 | 0.30 | 0.65 | 0.86 | 3.73 | 15531 | 1826 | 9 | 44 | 4 | 32 | 0 | logfile |